| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347550
Identifier: 29347550
GI number: 29347550
Start: 2693952
End: 2694845
Strand: Reverse
Name: 29347550
Synonym: BT_2140
Alternate gene names: NA
Gene position: 2694845-2693952 (Counterclockwise)
Preceding gene: 29347554
Following gene: 29347549
Centisome position: 43.05
GC content: 45.19
Gene sequence:
>894_bases ATGCTTAAGTTTTTGAAGAATTGGACGTTGCCTATTGCGATGCTGGTAGGTGCTGTCGGTTATCCGATATTTATCTACTT TTCTTTTCTGACTCCCTATCTTATCTTTACGATGTTACTGTTGACTTTCTGTAAGGTATCACCGCATGATTTGAAGCCTA AACCGTTGCACGCATGGTTGTTGCTGATTCAGATCGGGGGTGCTTTCCTTGCTTATTTATTGCTTTACCGTTTCAATAAG ATTGTAGCGGAGGGGGTGATGGTATGTATTATTTGTCCTACGGCTACGGCTGCTGCGGTGATTACTTCCAAGTTGGGAGG GAGTGCGGCAAGTCTGACTACTTATACATTGTTGGGTAATATCGGTGCTGCTATTGCGGTGCCTATTCTCTTCCCTTTGA TAGAGGTAAATCCGGATGTAAGTTTTTGGGGAGCATTTTGGGTTATTTTGAGTAAGGTGTTCCCCTTGTTGATCTGCCCT TTCCTTGCAGCATGGCTGTTGAGTAAATTCCTGCCGAAAGTGCATCAGAAGTTACTGGGATATCATGAACTCGCCTTTTA TTTGTGGGCGGTCTCTTTGGCTATTGTGACGGCTCAGACCCTGTATTCGTTACTGAACGATCCTGCGGATGGTTTCACGG AAATAATGATTGCGGTCGGTGCCTTGATTGCCTGTTGCTTGCAGTTCTTTTTGGGAAAGACTATCGGCTCGGTCTATAAT GACCGCATCAGTGGCGGGCAGGCACTGGGGCAGAAGAATACGATTCTTGCTATCTGGATGGCGCATACTTATCTGAACCC GTTATCGTCTGTTGCTCCCGGTTCGTATGTCCTGTGGCAAAATATCATCAATAGCTGGCAGTTGTGGAAGAAGAGAAAGA AAGAGATAAAATAG
Upstream 100 bases:
>100_bases CTCATGATTTACACTTAAGTTTTGTGTTTTTTTCGGTTTAATGGTAGCTTTTCTCCCGAAATCTCTGTTACTTTGCACCT CCAAGAAAAAATATACGACG
Downstream 100 bases:
>100_bases TGAATATAAGATATTGATATTTAGTTATTTGTTGTTTGTATCTCTCTTTTCCTTTGTTTTTCCTATTTTCCTACTTATAT AGAGGAGCGTATAGATAGCT
Product: putative sodium-dependent transporter
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLKFLKNWTLPIAMLVGAVGYPIFIYFSFLTPYLIFTMLLLTFCKVSPHDLKPKPLHAWLLLIQIGGAFLAYLLLYRFNK IVAEGVMVCIICPTATAAAVITSKLGGSAASLTTYTLLGNIGAAIAVPILFPLIEVNPDVSFWGAFWVILSKVFPLLICP FLAAWLLSKFLPKVHQKLLGYHELAFYLWAVSLAIVTAQTLYSLLNDPADGFTEIMIAVGALIACCLQFFLGKTIGSVYN DRISGGQALGQKNTILAIWMAHTYLNPLSSVAPGSYVLWQNIINSWQLWKKRKKEIK
Sequences:
>Translated_297_residues MLKFLKNWTLPIAMLVGAVGYPIFIYFSFLTPYLIFTMLLLTFCKVSPHDLKPKPLHAWLLLIQIGGAFLAYLLLYRFNK IVAEGVMVCIICPTATAAAVITSKLGGSAASLTTYTLLGNIGAAIAVPILFPLIEVNPDVSFWGAFWVILSKVFPLLICP FLAAWLLSKFLPKVHQKLLGYHELAFYLWAVSLAIVTAQTLYSLLNDPADGFTEIMIAVGALIACCLQFFLGKTIGSVYN DRISGGQALGQKNTILAIWMAHTYLNPLSSVAPGSYVLWQNIINSWQLWKKRKKEIK >Mature_297_residues MLKFLKNWTLPIAMLVGAVGYPIFIYFSFLTPYLIFTMLLLTFCKVSPHDLKPKPLHAWLLLIQIGGAFLAYLLLYRFNK IVAEGVMVCIICPTATAAAVITSKLGGSAASLTTYTLLGNIGAAIAVPILFPLIEVNPDVSFWGAFWVILSKVFPLLICP FLAAWLLSKFLPKVHQKLLGYHELAFYLWAVSLAIVTAQTLYSLLNDPADGFTEIMIAVGALIACCLQFFLGKTIGSVYN DRISGGQALGQKNTILAIWMAHTYLNPLSSVAPGSYVLWQNIINSWQLWKKRKKEIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32894; Mature: 32894
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKFLKNWTLPIAMLVGAVGYPIFIYFSFLTPYLIFTMLLLTFCKVSPHDLKPKPLHAWL CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LLIQIGGAFLAYLLLYRFNKIVAEGVMVCIICPTATAAAVITSKLGGSAASLTTYTLLGN HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH IGAAIAVPILFPLIEVNPDVSFWGAFWVILSKVFPLLICPFLAAWLLSKFLPKVHQKLLG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHELAFYLWAVSLAIVTAQTLYSLLNDPADGFTEIMIAVGALIACCLQFFLGKTIGSVYN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRISGGQALGQKNTILAIWMAHTYLNPLSSVAPGSYVLWQNIINSWQLWKKRKKEIK HHCCCCHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLKFLKNWTLPIAMLVGAVGYPIFIYFSFLTPYLIFTMLLLTFCKVSPHDLKPKPLHAWL CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LLIQIGGAFLAYLLLYRFNKIVAEGVMVCIICPTATAAAVITSKLGGSAASLTTYTLLGN HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH IGAAIAVPILFPLIEVNPDVSFWGAFWVILSKVFPLLICPFLAAWLLSKFLPKVHQKLLG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YHELAFYLWAVSLAIVTAQTLYSLLNDPADGFTEIMIAVGALIACCLQFFLGKTIGSVYN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRISGGQALGQKNTILAIWMAHTYLNPLSSVAPGSYVLWQNIINSWQLWKKRKKEIK HHCCCCHHCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA