| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347543
Identifier: 29347543
GI number: 29347543
Start: 2684368
End: 2687076
Strand: Reverse
Name: 29347543
Synonym: BT_2133
Alternate gene names: NA
Gene position: 2687076-2684368 (Counterclockwise)
Preceding gene: 29347544
Following gene: 29347535
Centisome position: 42.92
GC content: 43.08
Gene sequence:
>2709_bases ATGGCGCCATTGAGAGCAAAAATAATTATATCATTCATATTGCTGATTGTCTTGCTGATGCTTCCTGATGAGGCTACGTC TCAGCGTCGAAGAAGAGGGATGATTGCCTCCAACACTGCACAAACGGATTCCCTTAACAGGAAAGATTCGTTAGGGGCGG ATACAGTTGTGGTACGCGTTGACTCTGTAGCACCGACAAAGAAACAACCGTTCGATGCACCGGTTATTTATGAATCTAAC GACTCCACCACTTTTACATTGGGAGGTGCCGCTACGCTTTATGGTAGCGGCAAAGTCAACTATCAGAACATTGAGCTGGC AGCGGAAGTGATTTCCATGAATCTGGACAGTAGTACAGTACACGCCTATGGTATTAAAGACACGACGGGAACGATCAAAG GTAAACCTGTCTTTAAAGAAGGTGAAACTGCATACGATACAGAAACAATCAGCTATAACTTCAAGAGCAAAAAAGCGGGA ATCACCGATATTATCACTCAACAGGGTGAAGGTTATGTGACCGGTAGCAGAGCCAAGAAAGGAGCAAATGATGAAATCTT TATGGAGCACGGTCGCTACACGACTTGTGATCATCATGACCATCCTCACTTCTATATGCAGTTGACAAGAGCCAAAGTGC GCCCCAAGAAGAATGTAGTGACAGGACCTGCCTATCTTGTGGTGGAAGATGTTCCCCTGCCGCTGGCTGTGCCGTTTTTC TTCTTCCCTTTCTCCAGCAGCTATTCTTCGGGTTTCATTATGCCGACGTATATGGATGATTCAAGCCGTGGTTTCGGTCT GGCGGAAGGCGGATATTACTTTGCTATGAGTGACATCATGGACTTGAAGCTGACAGGAGATATATTCACGAAAGGTTCAT GGCGGCTTTCCGGATTGACCAATTATAATAAGAGGTACAAATACTCCGGTACATTGCAGGCGGATTATCAGGTGACCAAG ACCGGAGACAAAGGAATGCCGGATTATACGGTTGCCAAAGACTTCAAGGTAGTGTGGAACCACCGTCAGGATGCCAAGGC AAGTCCGAACAGTACTTTCTCCGCCAGTGTGAACTTCTCTACCAGTAGTTACGAACGATCTAACATCAACAACCTTTATA ACTCCCAGTTGTTGACTCAGAATACAAAGACATCAAGTATCAGTTACTCCCGTAGTTTCCCCGATATCGGTCTGACCTTG TCTGGAACGACCAATATTGCGCAGACCATGCGTGACTCATCCATTGCAGTAACGCTTCCTGACCTTAATATTACATTGAG CCGTCTGTTTCCCTTCAAGCGGAAGAAGGCTGCCGGAGCCGAGCGTTGGTATGAGAAGATTTCTGTCAGCTATACAGGAC GTCTGACGAACAGTATCCGTACTAAAGACGACCGTCTGTTCAAGACCGGCATCAGCGGATGGGAAAATGCGATGAACCAT AATATTCCTGTCAGTGCTACTTTTACACTGTTCAAGTATTTGCAGGTCAATCCTTCGGTGAATTATACGGAGCGTTGGTA CACCCGCAAGATAAATCAGACGTATAATGAGGAAACAGGGCGTTTGGAACAGAATCTGAATGATACTATTAATGGCTTTT ATCGTGTTTCCAACTATTCAGCCAGTTTGTCTTTAAGTACTAAACTGTATGGTATGTACAAACCTCTTTTCATGAAGAAG AAAGAGATACAGATTCGCCACGTTGTCACTCCGCAGGTTGGTATCAGTGGTGCTCCTGCATTTAGTAAATACTGGGAAGA GTATACGGATAATAACGGAAATACTCAGTATTATTCACCCTATACGGGACAGCCTTTTGGAGTCCCTTCACGTGAGGGTT CGGGAACGGTTAGTTTCTCGATTGCTAATAATCTGGAGATGAAATATTATGATGCTAAGAAGGATACATTAAAGAAAGTC AGCTTGATTGATGATTTGAGTGTGAATATGTCATATAATATGGCTGCAAAGGAAAAGCCATGGAGCCCCTTGAGTATGAA TCTTCGACTGAAACTGACAAAGAATTATACTTTCAATATGAATGCATCATTTGCTACTTACGCTTATACGTTTGATAAAA GTGGTAATGTGGTCGAAGGTAATCGAACTGAATGGTCGTATGGACGTTTCGGACGTTTTCAGGGGTATGGTTCTTCTTTT AACTATACCTTTAATAACGATACCTGGAAAAAGTGGTTCGGTCCGAAGGAAGACGAGAAGGATAAAGACAAGAAGGAGTC AGAAGATGGAGACGGAGAAGATTCTGAAGGTACGGAAGATGGAACTACGACCAAGAAAGTAGAGAAGGCGCAAGCCGACC CGGATGGTTATCAAGTATTCAAGATGCCTTGGTCTTTAAGTTTCAGTTATTCATTTAATATTCGTGAAGATAGGACTAAG CCTATTAATCGCTATTCGATGAGATATCCGTTTACTTATACTCACAATATCAATATGAATGGTAATGTGAAGATTTCCAA TAACTGGTCGCTTTCGTTCAATTCGGGTTACGATTTCCAAGCGAAGGAAATAACGCAGACTTCCTGTACGATTTCTCGTG ATTTGCACTGCTTTAACTTGTCTGCCAGTCTTTCACCATTTGGACGTTGGAAATACTATAATGTTACGATTCGTGCTAAT GCAAGTATTCTTCAAGACTTGAAATATGAGCAGAGAAGTCAGACGCAAAGTAATATTCAGTGGTATTAG
Upstream 100 bases:
>100_bases GTTTTTATAGCACTAAAAAATAATTAAATAACGGAGATTCTCACGCATTATTGATGAAGATTGTGTACTTTTGCCACTTC AAGCGTAAAACTATTAGTTA
Downstream 100 bases:
>100_bases GGTGTTATTAGTAAACGCTTTCTAATTCTGCATAAAGCTTGGGGAGTGATTCCTAAAAATGACGCAATGTATTTTAATGG GACCGTCAGAAATATGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 902; Mature: 901
Protein sequence:
>902_residues MAPLRAKIIISFILLIVLLMLPDEATSQRRRRGMIASNTAQTDSLNRKDSLGADTVVVRVDSVAPTKKQPFDAPVIYESN DSTTFTLGGAATLYGSGKVNYQNIELAAEVISMNLDSSTVHAYGIKDTTGTIKGKPVFKEGETAYDTETISYNFKSKKAG ITDIITQQGEGYVTGSRAKKGANDEIFMEHGRYTTCDHHDHPHFYMQLTRAKVRPKKNVVTGPAYLVVEDVPLPLAVPFF FFPFSSSYSSGFIMPTYMDDSSRGFGLAEGGYYFAMSDIMDLKLTGDIFTKGSWRLSGLTNYNKRYKYSGTLQADYQVTK TGDKGMPDYTVAKDFKVVWNHRQDAKASPNSTFSASVNFSTSSYERSNINNLYNSQLLTQNTKTSSISYSRSFPDIGLTL SGTTNIAQTMRDSSIAVTLPDLNITLSRLFPFKRKKAAGAERWYEKISVSYTGRLTNSIRTKDDRLFKTGISGWENAMNH NIPVSATFTLFKYLQVNPSVNYTERWYTRKINQTYNEETGRLEQNLNDTINGFYRVSNYSASLSLSTKLYGMYKPLFMKK KEIQIRHVVTPQVGISGAPAFSKYWEEYTDNNGNTQYYSPYTGQPFGVPSREGSGTVSFSIANNLEMKYYDAKKDTLKKV SLIDDLSVNMSYNMAAKEKPWSPLSMNLRLKLTKNYTFNMNASFATYAYTFDKSGNVVEGNRTEWSYGRFGRFQGYGSSF NYTFNNDTWKKWFGPKEDEKDKDKKESEDGDGEDSEGTEDGTTTKKVEKAQADPDGYQVFKMPWSLSFSYSFNIREDRTK PINRYSMRYPFTYTHNINMNGNVKISNNWSLSFNSGYDFQAKEITQTSCTISRDLHCFNLSASLSPFGRWKYYNVTIRAN ASILQDLKYEQRSQTQSNIQWY
Sequences:
>Translated_902_residues MAPLRAKIIISFILLIVLLMLPDEATSQRRRRGMIASNTAQTDSLNRKDSLGADTVVVRVDSVAPTKKQPFDAPVIYESN DSTTFTLGGAATLYGSGKVNYQNIELAAEVISMNLDSSTVHAYGIKDTTGTIKGKPVFKEGETAYDTETISYNFKSKKAG ITDIITQQGEGYVTGSRAKKGANDEIFMEHGRYTTCDHHDHPHFYMQLTRAKVRPKKNVVTGPAYLVVEDVPLPLAVPFF FFPFSSSYSSGFIMPTYMDDSSRGFGLAEGGYYFAMSDIMDLKLTGDIFTKGSWRLSGLTNYNKRYKYSGTLQADYQVTK TGDKGMPDYTVAKDFKVVWNHRQDAKASPNSTFSASVNFSTSSYERSNINNLYNSQLLTQNTKTSSISYSRSFPDIGLTL SGTTNIAQTMRDSSIAVTLPDLNITLSRLFPFKRKKAAGAERWYEKISVSYTGRLTNSIRTKDDRLFKTGISGWENAMNH NIPVSATFTLFKYLQVNPSVNYTERWYTRKINQTYNEETGRLEQNLNDTINGFYRVSNYSASLSLSTKLYGMYKPLFMKK KEIQIRHVVTPQVGISGAPAFSKYWEEYTDNNGNTQYYSPYTGQPFGVPSREGSGTVSFSIANNLEMKYYDAKKDTLKKV SLIDDLSVNMSYNMAAKEKPWSPLSMNLRLKLTKNYTFNMNASFATYAYTFDKSGNVVEGNRTEWSYGRFGRFQGYGSSF NYTFNNDTWKKWFGPKEDEKDKDKKESEDGDGEDSEGTEDGTTTKKVEKAQADPDGYQVFKMPWSLSFSYSFNIREDRTK PINRYSMRYPFTYTHNINMNGNVKISNNWSLSFNSGYDFQAKEITQTSCTISRDLHCFNLSASLSPFGRWKYYNVTIRAN ASILQDLKYEQRSQTQSNIQWY >Mature_901_residues APLRAKIIISFILLIVLLMLPDEATSQRRRRGMIASNTAQTDSLNRKDSLGADTVVVRVDSVAPTKKQPFDAPVIYESND STTFTLGGAATLYGSGKVNYQNIELAAEVISMNLDSSTVHAYGIKDTTGTIKGKPVFKEGETAYDTETISYNFKSKKAGI TDIITQQGEGYVTGSRAKKGANDEIFMEHGRYTTCDHHDHPHFYMQLTRAKVRPKKNVVTGPAYLVVEDVPLPLAVPFFF FPFSSSYSSGFIMPTYMDDSSRGFGLAEGGYYFAMSDIMDLKLTGDIFTKGSWRLSGLTNYNKRYKYSGTLQADYQVTKT GDKGMPDYTVAKDFKVVWNHRQDAKASPNSTFSASVNFSTSSYERSNINNLYNSQLLTQNTKTSSISYSRSFPDIGLTLS GTTNIAQTMRDSSIAVTLPDLNITLSRLFPFKRKKAAGAERWYEKISVSYTGRLTNSIRTKDDRLFKTGISGWENAMNHN IPVSATFTLFKYLQVNPSVNYTERWYTRKINQTYNEETGRLEQNLNDTINGFYRVSNYSASLSLSTKLYGMYKPLFMKKK EIQIRHVVTPQVGISGAPAFSKYWEEYTDNNGNTQYYSPYTGQPFGVPSREGSGTVSFSIANNLEMKYYDAKKDTLKKVS LIDDLSVNMSYNMAAKEKPWSPLSMNLRLKLTKNYTFNMNASFATYAYTFDKSGNVVEGNRTEWSYGRFGRFQGYGSSFN YTFNNDTWKKWFGPKEDEKDKDKKESEDGDGEDSEGTEDGTTTKKVEKAQADPDGYQVFKMPWSLSFSYSFNIREDRTKP INRYSMRYPFTYTHNINMNGNVKISNNWSLSFNSGYDFQAKEITQTSCTISRDLHCFNLSASLSPFGRWKYYNVTIRANA SILQDLKYEQRSQTQSNIQWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102262; Mature: 102131
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLRAKIIISFILLIVLLMLPDEATSQRRRRGMIASNTAQTDSLNRKDSLGADTVVVRV CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEEE DSVAPTKKQPFDAPVIYESNDSTTFTLGGAATLYGSGKVNYQNIELAAEVISMNLDSSTV ECCCCCCCCCCCCCEEEECCCCEEEEECCEEEEECCCCEEECHHHEEEEEHEECCCCCEE HAYGIKDTTGTIKGKPVFKEGETAYDTETISYNFKSKKAGITDIITQQGEGYVTGSRAKK EEEECCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEECCCCCC GANDEIFMEHGRYTTCDHHDHPHFYMQLTRAKVRPKKNVVTGPAYLVVEDVPLPLAVPFF CCCCCEEEECCCEEECCCCCCCEEEEEEEHHHCCCCCCEECCCEEEEEECCCCCEECCEE FFPFSSSYSSGFIMPTYMDDSSRGFGLAEGGYYFAMSDIMDLKLTGDIFTKGSWRLSGLT EEECCCCCCCCEEEEEEECCCCCCCEEECCCEEEEECCEEEEEEECCEEECCCEEEECCC NYNKRYKYSGTLQADYQVTKTGDKGMPDYTVAKDFKVVWNHRQDAKASPNSTFSASVNFS CCCCEEEECCEEEECEEEEECCCCCCCCCCHHCCEEEEECCCCCCCCCCCCEEEEEEECC TSSYERSNINNLYNSQLLTQNTKTSSISYSRSFPDIGLTLSGTTNIAQTMRDSSIAVTLP CCCCCHHCHHHHHCCHHEECCCCCCEEEECCCCCCCCEEECCCCHHHHHHCCCEEEEEEC DLNITLSRLFPFKRKKAAGAERWYEKISVSYTGRLTNSIRTKDDRLFKTGISGWENAMNH CCCEEHHHHCCCHHHHHCCHHHHHHHEEEEEEEEECCCCCCCCCHHHHHCCCHHHHHHCC NIPVSATFTLFKYLQVNPSVNYTERWYTRKINQTYNEETGRLEQNLNDTINGFYRVSNYS CCCCEEHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHCCEEEEEECCE ASLSLSTKLYGMYKPLFMKKKEIQIRHVVTPQVGISGAPAFSKYWEEYTDNNGNTQYYSP EEEEEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECC YTGQPFGVPSREGSGTVSFSIANNLEMKYYDAKKDTLKKVSLIDDLSVNMSYNMAAKEKP CCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHEECCCCCEEECCCCCCCC WSPLSMNLRLKLTKNYTFNMNASFATYAYTFDKSGNVVEGNRTEWSYGRFGRFQGYGSSF CCCCEEEEEEEEEECEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCE NYTFNNDTWKKWFGPKEDEKDKDKKESEDGDGEDSEGTEDGTTTKKVEKAQADPDGYQVF EEEECCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEE KMPWSLSFSYSFNIREDRTKPINRYSMRYPFTYTHNINMNGNVKISNNWSLSFNSGYDFQ EECEEEEEEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCEEEECCCEEEEECCCCCCC AKEITQTSCTISRDLHCFNLSASLSPFGRWKYYNVTIRANASILQDLKYEQRSQTQSNIQ HHHEECCEEEEECCEEEEEECCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCCCC WY CC >Mature Secondary Structure APLRAKIIISFILLIVLLMLPDEATSQRRRRGMIASNTAQTDSLNRKDSLGADTVVVRV CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEEE DSVAPTKKQPFDAPVIYESNDSTTFTLGGAATLYGSGKVNYQNIELAAEVISMNLDSSTV ECCCCCCCCCCCCCEEEECCCCEEEEECCEEEEECCCCEEECHHHEEEEEHEECCCCCEE HAYGIKDTTGTIKGKPVFKEGETAYDTETISYNFKSKKAGITDIITQQGEGYVTGSRAKK EEEECCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCCEEECCCCCC GANDEIFMEHGRYTTCDHHDHPHFYMQLTRAKVRPKKNVVTGPAYLVVEDVPLPLAVPFF CCCCCEEEECCCEEECCCCCCCEEEEEEEHHHCCCCCCEECCCEEEEEECCCCCEECCEE FFPFSSSYSSGFIMPTYMDDSSRGFGLAEGGYYFAMSDIMDLKLTGDIFTKGSWRLSGLT EEECCCCCCCCEEEEEEECCCCCCCEEECCCEEEEECCEEEEEEECCEEECCCEEEECCC NYNKRYKYSGTLQADYQVTKTGDKGMPDYTVAKDFKVVWNHRQDAKASPNSTFSASVNFS CCCCEEEECCEEEECEEEEECCCCCCCCCCHHCCEEEEECCCCCCCCCCCCEEEEEEECC TSSYERSNINNLYNSQLLTQNTKTSSISYSRSFPDIGLTLSGTTNIAQTMRDSSIAVTLP CCCCCHHCHHHHHCCHHEECCCCCCEEEECCCCCCCCEEECCCCHHHHHHCCCEEEEEEC DLNITLSRLFPFKRKKAAGAERWYEKISVSYTGRLTNSIRTKDDRLFKTGISGWENAMNH CCCEEHHHHCCCHHHHHCCHHHHHHHEEEEEEEEECCCCCCCCCHHHHHCCCHHHHHHCC NIPVSATFTLFKYLQVNPSVNYTERWYTRKINQTYNEETGRLEQNLNDTINGFYRVSNYS CCCCEEHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHCCEEEEEECCE ASLSLSTKLYGMYKPLFMKKKEIQIRHVVTPQVGISGAPAFSKYWEEYTDNNGNTQYYSP EEEEEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEECC YTGQPFGVPSREGSGTVSFSIANNLEMKYYDAKKDTLKKVSLIDDLSVNMSYNMAAKEKP CCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHEECCCCCEEECCCCCCCC WSPLSMNLRLKLTKNYTFNMNASFATYAYTFDKSGNVVEGNRTEWSYGRFGRFQGYGSSF CCCCEEEEEEEEEECEEEECCCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCE NYTFNNDTWKKWFGPKEDEKDKDKKESEDGDGEDSEGTEDGTTTKKVEKAQADPDGYQVF EEEECCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEE KMPWSLSFSYSFNIREDRTKPINRYSMRYPFTYTHNINMNGNVKISNNWSLSFNSGYDFQ EECEEEEEEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCEEEECCCEEEEECCCCCCC AKEITQTSCTISRDLHCFNLSASLSPFGRWKYYNVTIRANASILQDLKYEQRSQTQSNIQ HHHEECCEEEEECCEEEEEECCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCCCC WY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA