| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347535
Identifier: 29347535
GI number: 29347535
Start: 2675474
End: 2676037
Strand: Reverse
Name: 29347535
Synonym: BT_2125
Alternate gene names: NA
Gene position: 2676037-2675474 (Counterclockwise)
Preceding gene: 29347543
Following gene: 29347531
Centisome position: 42.75
GC content: 41.13
Gene sequence:
>564_bases ATGATAATTTGTCGTTTAGAAGATAATATGTATTTTTGTAGCATGATAAAACTAGTCAATAGCATGAAAAAGAAAGTATT GTTTCTGCTGCCATTGTTTCTGGGTGCTTGTTCGGATAGCGGAGAAAGCCCTGTTATCACGATAGAAAAGCTATATGTGA AAGTAGATCAAGGCGATGGAGAAACCATCCGCGAAGACTATGCAAACCGGATGAGTGAAATGCCTGCTTTGAAAGTGGGA GATAAGGTGGATGCGTTTTTGATCTTGGACGGCAATGGAGCCGAACTGAAATCTTTCCAGCTTCAGAATGGGGAAGAGAT GAAGACTGAGCTCCGTTATGAAAAGACAGAAGTCACTACCGAAGGAAATCTGACAGACGAAGAAAAAGGGCAGTTGCGCT TCAAAGATGGCGTGACAAAGACTAAGGTGCTGGTTCATGCCACTATTGAGCATGTAGATAAAAATGGTGATGTACAATTA TCTTTTTATCTCTCTTCAAAAGCGGAGTGTGAAGGAGCGCAGGAAGTGATTGACTTGAAAACAGAAGTCGTTGAGAATGA ATGA
Upstream 100 bases:
>100_bases GGATAAAAAGAGATATACGAAGCAAAGATAGTCATAAAAAATGAGAGATATAACAGAATGGAGGAGATAGTTGCTGGTTG TGTTTTGGATGATAAATCGT
Downstream 100 bases:
>100_bases ATCCTGAAAGGGAGTGAGTCACTTTAACGTAACGAAGGAAATATAATAAAAAGAAGCGGTCTCCGGAGAGGCCGCTTCTT TTTATTGTCAGTTATTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDGETIREDYANRMSEMPALKVG DKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTTEGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQL SFYLSSKAECEGAQEVIDLKTEVVENE
Sequences:
>Translated_187_residues MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDGETIREDYANRMSEMPALKVG DKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTTEGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQL SFYLSSKAECEGAQEVIDLKTEVVENE >Mature_187_residues MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDGETIREDYANRMSEMPALKVG DKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTTEGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQL SFYLSSKAECEGAQEVIDLKTEVVENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21028; Mature: 21028
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDG CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCC ETIREDYANRMSEMPALKVGDKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTT HHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHEEEE EGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQLSFYLSSKAECEGAQEVIDLK CCCCCCCCCCCEEECCCCCCHHEEEEEEHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH TEVVENE HHHHCCC >Mature Secondary Structure MIICRLEDNMYFCSMIKLVNSMKKKVLFLLPLFLGACSDSGESPVITIEKLYVKVDQGDG CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCC ETIREDYANRMSEMPALKVGDKVDAFLILDGNGAELKSFQLQNGEEMKTELRYEKTEVTT HHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHEEEE EGNLTDEEKGQLRFKDGVTKTKVLVHATIEHVDKNGDVQLSFYLSSKAECEGAQEVIDLK CCCCCCCCCCCEEECCCCCCHHEEEEEEHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHH TEVVENE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA