Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347527

Identifier: 29347527

GI number: 29347527

Start: 2663025

End: 2664392

Strand: Reverse

Name: 29347527

Synonym: BT_2117

Alternate gene names: NA

Gene position: 2664392-2663025 (Counterclockwise)

Preceding gene: 29347528

Following gene: 29347526

Centisome position: 42.56

GC content: 46.86

Gene sequence:

>1368_bases
ATGAAAAAAGAATTTCTCGTAGCTGTTAGTGTTTTGTTTGGAATGGCGGCTTCTCTTTCTGTTTCGGCACAAGAGAAGCT
CAGCCTGAAACAATGCCGTGAAATGGCTCTAAAATATAACAAGGAAATGGCTGCTGCCGATAAACAGACGGAGGCAGCCC
GGCTGCTGTCTCTCAGCTATAAAGCTAACTTCTTCCCCAATTTTACAGCAAGCGGAACCGGACTGTATAGTACGGCAGAC
GGCAGCTTGGGCATTCGGGGAGGAAATCTGCCGGTATTCCTGCCCGATCCCGTTACTGGAGAGTTGGCAACAAGCGGTTA
CGCTTATTTCCCCGGATTGAATCTGGACTATAAAGTCGGGACCGTCTATACAGGCGGAGTACAAGTGGAACAACCGCTTT
ATATGGGCGGAAAGATTCGCGCCGCCTATAAAATGTCATTGCTCGGCAAGGAAATGGCACATCTGAATGAGGAACTGACT
GCATCCGGAGTGATTCTGAATACAGACAAGGCTTATGTGCAACTAGTGAAAGCCAAAGAAATGAAGAAAGTAGCGGAGAA
ATATCATGTGTTGCTCAATGAGCTGTTTCGGAATGTGAAGAGTGCCCACCAGCATGGCATGAAACCTCAGAATGATGTGT
TGAAGGTACAAGTGAAACTTAATGAGAGTGAGCTGGCATTGCGCAAGGCGGATAATGCGCTCCGTCTTGCCGGCATGAAT
CTTTGCCATTATATCGGTCGGCCTCTGACAGCGGGGATTGATATCTCGGATGAATTTCCGGAAGTGGAGCAAGAGTGGAA
GACACAGGTTGCCGATATCAGTGCCCGTCCCGAATATGGTATTTTGAATAAACAGATCGCCATGGCCGAGCAGCAGGTAA
AGCTGAATCGGAGTGAACTGCTGCCACGTGTGGGAGTGAAGGGAAGTTATGACTATTTCCATGGATTGGAAATCAATGAC
GAAACTTTGATGAAAAAAGGATCATTCTCCGTCTTTCTGAATGTTTCAGTACCTCTGTTTCATTTTGGCGAACGTATGAA
TAAGGTGCGCTCTGCCAAGGTAAAACTGGAACAGACTCGTCTTGAACAGGAAAATGCCAATGAAAAGATGTTGCTTGAAT
TGACGCAGGCCACTAATAATTTGGATGAGGCCCGACTGGAATGCGAGCTTTCAGAACGTTCGCTGGAACAGGCGGAAGAG
AATATGAAAGTCAGCGGCAAACAGTATGAGGTGGGATTGGAAACTCTTTCGGATTATCTGGAAGCGCAAGTTATGTGGCA
ACAGGCGTATCAGACGAAAGTGGATGCCCATTTTCAGTTGTATGTAAACTATGTGGCTTACTTGAAAGCGGCGGGGCAAC
TGCAATAA

Upstream 100 bases:

>100_bases
CAGCTTCTATCATGGGAGGATTGCTGTTTGGCACGCTCATCACGTTGCTCTTTATCCCGATTCTGTATGCATTATTCTTT
CATATCAAAAAGACAGACAA

Downstream 100 bases:

>100_bases
AGTTCTCAAACTATTCTCATCGCCTTGAGAAAAAATTCTCACCACAGTGAGAAAAAATACTCATGCCTATGAGAATATTT
TCTCAAAGGGGTGAGAATAA

Product: outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Acriflavin Resistance Protein; Outer Membrane Protein-Like; Type I Secretion Outer Membrane Protein

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MKKEFLVAVSVLFGMAASLSVSAQEKLSLKQCREMALKYNKEMAAADKQTEAARLLSLSYKANFFPNFTASGTGLYSTAD
GSLGIRGGNLPVFLPDPVTGELATSGYAYFPGLNLDYKVGTVYTGGVQVEQPLYMGGKIRAAYKMSLLGKEMAHLNEELT
ASGVILNTDKAYVQLVKAKEMKKVAEKYHVLLNELFRNVKSAHQHGMKPQNDVLKVQVKLNESELALRKADNALRLAGMN
LCHYIGRPLTAGIDISDEFPEVEQEWKTQVADISARPEYGILNKQIAMAEQQVKLNRSELLPRVGVKGSYDYFHGLEIND
ETLMKKGSFSVFLNVSVPLFHFGERMNKVRSAKVKLEQTRLEQENANEKMLLELTQATNNLDEARLECELSERSLEQAEE
NMKVSGKQYEVGLETLSDYLEAQVMWQQAYQTKVDAHFQLYVNYVAYLKAAGQLQ

Sequences:

>Translated_455_residues
MKKEFLVAVSVLFGMAASLSVSAQEKLSLKQCREMALKYNKEMAAADKQTEAARLLSLSYKANFFPNFTASGTGLYSTAD
GSLGIRGGNLPVFLPDPVTGELATSGYAYFPGLNLDYKVGTVYTGGVQVEQPLYMGGKIRAAYKMSLLGKEMAHLNEELT
ASGVILNTDKAYVQLVKAKEMKKVAEKYHVLLNELFRNVKSAHQHGMKPQNDVLKVQVKLNESELALRKADNALRLAGMN
LCHYIGRPLTAGIDISDEFPEVEQEWKTQVADISARPEYGILNKQIAMAEQQVKLNRSELLPRVGVKGSYDYFHGLEIND
ETLMKKGSFSVFLNVSVPLFHFGERMNKVRSAKVKLEQTRLEQENANEKMLLELTQATNNLDEARLECELSERSLEQAEE
NMKVSGKQYEVGLETLSDYLEAQVMWQQAYQTKVDAHFQLYVNYVAYLKAAGQLQ
>Mature_455_residues
MKKEFLVAVSVLFGMAASLSVSAQEKLSLKQCREMALKYNKEMAAADKQTEAARLLSLSYKANFFPNFTASGTGLYSTAD
GSLGIRGGNLPVFLPDPVTGELATSGYAYFPGLNLDYKVGTVYTGGVQVEQPLYMGGKIRAAYKMSLLGKEMAHLNEELT
ASGVILNTDKAYVQLVKAKEMKKVAEKYHVLLNELFRNVKSAHQHGMKPQNDVLKVQVKLNESELALRKADNALRLAGMN
LCHYIGRPLTAGIDISDEFPEVEQEWKTQVADISARPEYGILNKQIAMAEQQVKLNRSELLPRVGVKGSYDYFHGLEIND
ETLMKKGSFSVFLNVSVPLFHFGERMNKVRSAKVKLEQTRLEQENANEKMLLELTQATNNLDEARLECELSERSLEQAEE
NMKVSGKQYEVGLETLSDYLEAQVMWQQAYQTKVDAHFQLYVNYVAYLKAAGQLQ

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50889; Mature: 50889

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEFLVAVSVLFGMAASLSVSAQEKLSLKQCREMALKYNKEMAAADKQTEAARLLSLSY
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHEEEE
KANFFPNFTASGTGLYSTADGSLGIRGGNLPVFLPDPVTGELATSGYAYFPGLNLDYKVG
CCCCCCCCCCCCCCEEEECCCCEEEECCCCCEECCCCCCCCHHCCCEEECCCCCCCEEEC
TVYTGGVQVEQPLYMGGKIRAAYKMSLLGKEMAHLNEELTASGVILNTDKAYVQLVKAKE
EEEECCEEECCCEECCCEEEHHHHHHHHHHHHHHHCHHHHHCCEEEECCHHHHHHHHHHH
MKKVAEKYHVLLNELFRNVKSAHQHGMKPQNDVLKVQVKLNESELALRKADNALRLAGMN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHCCCHHHHHHHH
LCHYIGRPLTAGIDISDEFPEVEQEWKTQVADISARPEYGILNKQIAMAEQQVKLNRSEL
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHC
LPRVGVKGSYDYFHGLEINDETLMKKGSFSVFLNVSVPLFHFGERMNKVRSAKVKLEQTR
CCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LEQENANEKMLLELTQATNNLDEARLECELSERSLEQAEENMKVSGKQYEVGLETLSDYL
HHHHCCCCCEEEEEHHHHCCHHHHHHEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH
EAQVMWQQAYQTKVDAHFQLYVNYVAYLKAAGQLQ
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKEFLVAVSVLFGMAASLSVSAQEKLSLKQCREMALKYNKEMAAADKQTEAARLLSLSY
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHEEEE
KANFFPNFTASGTGLYSTADGSLGIRGGNLPVFLPDPVTGELATSGYAYFPGLNLDYKVG
CCCCCCCCCCCCCCEEEECCCCEEEECCCCCEECCCCCCCCHHCCCEEECCCCCCCEEEC
TVYTGGVQVEQPLYMGGKIRAAYKMSLLGKEMAHLNEELTASGVILNTDKAYVQLVKAKE
EEEECCEEECCCEECCCEEEHHHHHHHHHHHHHHHCHHHHHCCEEEECCHHHHHHHHHHH
MKKVAEKYHVLLNELFRNVKSAHQHGMKPQNDVLKVQVKLNESELALRKADNALRLAGMN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHCCCHHHHHHHH
LCHYIGRPLTAGIDISDEFPEVEQEWKTQVADISARPEYGILNKQIAMAEQQVKLNRSEL
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHC
LPRVGVKGSYDYFHGLEINDETLMKKGSFSVFLNVSVPLFHFGERMNKVRSAKVKLEQTR
CCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LEQENANEKMLLELTQATNNLDEARLECELSERSLEQAEENMKVSGKQYEVGLETLSDYL
HHHHCCCCCEEEEEHHHHCCHHHHHHEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH
EAQVMWQQAYQTKVDAHFQLYVNYVAYLKAAGQLQ
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA