Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347526

Identifier: 29347526

GI number: 29347526

Start: 2661984

End: 2662535

Strand: Reverse

Name: 29347526

Synonym: BT_2116

Alternate gene names: NA

Gene position: 2662535-2661984 (Counterclockwise)

Preceding gene: 29347527

Following gene: 29347524

Centisome position: 42.53

GC content: 36.05

Gene sequence:

>552_bases
ATGGATCGTCAGTTAATAGAGACAACGTATGAGATGCGTAAACTAGATACCTCAGAAAAAATAGAATCGTTCGATTGCGG
AGATACCGACTTGAACGATTTTATTTTGAATGAATCTTTCCTGTATCGGGAAGCTTTGCTGGCTGTCAGTTATGTACTTG
AGAATAAAGTTAATCAGCGATCGGTTGCTTATTTCAGTCTTGCCAATGACAGGATCTCTTTGTCTGATTTTGAAAATAAA
ACTGAATTCAATCGTTTCCGCAAACATCGGTTTGTGAATGAGAAGCGTTTAAAAAGCTATCCTGCTGCAAAGATTTGTCG
TTTGGGTGTTGACTTGTCTGTAAAAGGTCAATCAATAGGCTCATTCCTATTGAATTTTATTAAAAGTTATTTTATTATTG
AGAATAAAACAGGTTGCCGTTTTTTAACTGTTGATGCGTATGCGGCTGCTGTGCCTTTTTATATGAAAAACGGTTTTGTC
CCATTGAATGATGAAGATGTGGATTCTGCTACACGTTTGCTCTACTTTGATCTGAATGATATTGTGAAATAA

Upstream 100 bases:

>100_bases
TTGAAGAGCGGATGAAAGAAAAACGCAGGGAGACCTCCGAGCAGCGGGCAAAAAGATTGAAAGACTACGAACTGGCAATG
AAAATATTTAAAAAATAGAT

Downstream 100 bases:

>100_bases
TTCAGATTCTGTTCTACTTTTATATAATATAAAATGATGGATTGGTAATGTTAATTGTTACAACATAGTCTTTTGAATTT
ATATAATAGTGACGATTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDRQLIETTYEMRKLDTSEKIESFDCGDTDLNDFILNESFLYREALLAVSYVLENKVNQRSVAYFSLANDRISLSDFENK
TEFNRFRKHRFVNEKRLKSYPAAKICRLGVDLSVKGQSIGSFLLNFIKSYFIIENKTGCRFLTVDAYAAAVPFYMKNGFV
PLNDEDVDSATRLLYFDLNDIVK

Sequences:

>Translated_183_residues
MDRQLIETTYEMRKLDTSEKIESFDCGDTDLNDFILNESFLYREALLAVSYVLENKVNQRSVAYFSLANDRISLSDFENK
TEFNRFRKHRFVNEKRLKSYPAAKICRLGVDLSVKGQSIGSFLLNFIKSYFIIENKTGCRFLTVDAYAAAVPFYMKNGFV
PLNDEDVDSATRLLYFDLNDIVK
>Mature_183_residues
MDRQLIETTYEMRKLDTSEKIESFDCGDTDLNDFILNESFLYREALLAVSYVLENKVNQRSVAYFSLANDRISLSDFENK
TEFNRFRKHRFVNEKRLKSYPAAKICRLGVDLSVKGQSIGSFLLNFIKSYFIIENKTGCRFLTVDAYAAAVPFYMKNGFV
PLNDEDVDSATRLLYFDLNDIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21246; Mature: 21246

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQLIETTYEMRKLDTSEKIESFDCGDTDLNDFILNESFLYREALLAVSYVLENKVNQR
CCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCC
SVAYFSLANDRISLSDFENKTEFNRFRKHRFVNEKRLKSYPAAKICRLGVDLSVKGQSIG
CEEEEEECCCEEEHHCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCCEEECCHHHH
SFLLNFIKSYFIIENKTGCRFLTVDAYAAAVPFYMKNGFVPLNDEDVDSATRLLYFDLND
HHHHHHHHHHEEEECCCCCEEEEECHHHHHHHHHHHCCEECCCCCCCCCHHEEEEEEHHH
IVK
HCC
>Mature Secondary Structure
MDRQLIETTYEMRKLDTSEKIESFDCGDTDLNDFILNESFLYREALLAVSYVLENKVNQR
CCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCC
SVAYFSLANDRISLSDFENKTEFNRFRKHRFVNEKRLKSYPAAKICRLGVDLSVKGQSIG
CEEEEEECCCEEEHHCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHCCCEEECCHHHH
SFLLNFIKSYFIIENKTGCRFLTVDAYAAAVPFYMKNGFVPLNDEDVDSATRLLYFDLND
HHHHHHHHHHEEEECCCCCEEEEECHHHHHHHHHHHCCEECCCCCCCCCHHEEEEEEHHH
IVK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA