| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is ilvH [H]
Identifier: 29347486
GI number: 29347486
Start: 2600932
End: 2601495
Strand: Reverse
Name: ilvH [H]
Synonym: BT_2076
Alternate gene names: 29347486
Gene position: 2601495-2600932 (Counterclockwise)
Preceding gene: 29347487
Following gene: 29347485
Centisome position: 41.56
GC content: 42.2
Gene sequence:
>564_bases ATGAGTGATAAGACATTATATACGATTATAGTTCATTCTGAAAATATAGCCGGATTGCTGAATCAGGTGACCGCTGTATT TACCCGTCGGCAAATAAACATCGAGAGTTTGAACGTTTCTGCTTCTTCCATTAAAGGAGTACATAAATATACGATTACAG CGTGGACTGATAAGGACACTATCGAAAAGGTGGTGAAGCAGATCGAAAAGAAGATTGATGTGATTCAGGCGCACTATTTT ACGGAAGACGAGATTTATTTCCATGAGATAGCCTTATATAAGGTATCTACTCCTGCTTTTCAGGAGACTCCGGAAGCATC TAAAGTGATCCGCAGATATAATGCCCGCATTGTAGAGGTGAATCCGGTATTCTCTATCGTCGAGAAGAACGGCATGAGTG AAGAGATTACTTCCCTTTACGAAGAACTTCGGGCTTTGAAATGTGTGCTGCAGTTTGTCCGTTCGGGCCGTGTGGCTATT ACTACCAGCTGTTTCGAACGTGTGAATGAGTTCCTGGACGGACAGGAAGCGAAGTATAAGCAAAGTAAAAAGGAACAGGA GTAA
Upstream 100 bases:
>100_bases AGCCTGTGTGGTAGAAGAAGGCAATGTCCTCCCGATGACCCCTCCGGGCGGTTCAGTCAATCAGATGTTGCTGGAATGTT AATCCTTAATTTAGAAAGTT
Downstream 100 bases:
>100_bases TGAGTGAAGAAAATAAAATAGGGACTTATCAGTTTGTGGCAGAGCCGTTTCACGTAGATTTTAACGGCCGTCTGACCATG GGCGTGCTGGGAAATCATCT
Product: acetohydroxyacid synthase small subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSDKTLYTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVVKQIEKKIDVIQAHYF TEDEIYFHEIALYKVSTPAFQETPEASKVIRRYNARIVEVNPVFSIVEKNGMSEEITSLYEELRALKCVLQFVRSGRVAI TTSCFERVNEFLDGQEAKYKQSKKEQE
Sequences:
>Translated_187_residues MSDKTLYTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVVKQIEKKIDVIQAHYF TEDEIYFHEIALYKVSTPAFQETPEASKVIRRYNARIVEVNPVFSIVEKNGMSEEITSLYEELRALKCVLQFVRSGRVAI TTSCFERVNEFLDGQEAKYKQSKKEQE >Mature_186_residues SDKTLYTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDTIEKVVKQIEKKIDVIQAHYFT EDEIYFHEIALYKVSTPAFQETPEASKVIRRYNARIVEVNPVFSIVEKNGMSEEITSLYEELRALKCVLQFVRSGRVAIT TSCFERVNEFLDGQEAKYKQSKKEQE
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=148, Percent_Identity=25.6756756756757, Blast_Score=64, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 21517; Mature: 21386
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKTLYTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDT CCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCEEEEEEEEECCHHH IEKVVKQIEKKIDVIQAHYFTEDEIYFHEIALYKVSTPAFQETPEASKVIRRYNARIVEV HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEE NPVFSIVEKNGMSEEITSLYEELRALKCVLQFVRSGRVAITTSCFERVNEFLDGQEAKYK CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHH QSKKEQE HHHCCCC >Mature Secondary Structure SDKTLYTIIVHSENIAGLLNQVTAVFTRRQINIESLNVSASSIKGVHKYTITAWTDKDT CCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCEEEEEEEEECCHHH IEKVVKQIEKKIDVIQAHYFTEDEIYFHEIALYKVSTPAFQETPEASKVIRRYNARIVEV HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCEEEEE NPVFSIVEKNGMSEEITSLYEELRALKCVLQFVRSGRVAITTSCFERVNEFLDGQEAKYK CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHH QSKKEQE HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]