| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347428
Identifier: 29347428
GI number: 29347428
Start: 2532274
End: 2532765
Strand: Reverse
Name: 29347428
Synonym: BT_2018
Alternate gene names: NA
Gene position: 2532765-2532274 (Counterclockwise)
Preceding gene: 29347431
Following gene: 29347427
Centisome position: 40.46
GC content: 51.02
Gene sequence:
>492_bases ATGACAAGAATTGGATTATTGTCCGATACCCACGCTTATTGGGACGAAAAATATCTCGAATATTTTGAATCGTGCGACGA AATCTGGCATGCCGGAGATATCGGTTCGGTAGAAGTAGCCGAGAAGTTGGCGGCTTTCCGGCCCCTGCGGGCAGTTTACG GCAACATAGACGGGCAAGAAATACGGAAGATGTTCCCGCAGGTGAACCGCTTCACGGTGGACGGAGCGGAAGTGCTGATC AAGCATATCGGCGGGTATCCGGGCAAGTACGACCCTTCGGTTATCGGCAGTTTGATGGCCCGTCCGCCGAAACTTTTCAT CAGCGGACACTCCCATATATTAAAGGTGAAATACGACAAAACGTTGGACATGCTGCACATCAATCCCGGAGCCGCAGGGA TGTCCGGTTTCCATAAAGTGCGGACAATGGTGCGCTTTGTCATCGACAACGGAACGTTCAAAGACCTCGAAGTTATTGAA CTGGCAGGATAG
Upstream 100 bases:
>100_bases GAGCCAGCTGATATCACGTTTGAAATAATTATATTTGCTTTCCATGTGCTTTAAGATTTTCCCAAATATAGTATCTTTGC AGGACTAAACAAAGAAAATT
Downstream 100 bases:
>100_bases ATTTCTTACAATTCATTTTGTCACGTCAGATTTCTTTCCGACCTTTGCACACAGTAAAATGAATAACTCAGACGACAATG AAAGGAATTATTCTGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoesterase; Phosphoesterase Subfamily; Metallophosphoesterase Superfamily Protein; Metallophosphoesterase; Phosphodiesterase Family Protein; Phosphoesterase Protein; Calcineurin-Like Phosphoesterase
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTRIGLLSDTHAYWDEKYLEYFESCDEIWHAGDIGSVEVAEKLAAFRPLRAVYGNIDGQEIRKMFPQVNRFTVDGAEVLI KHIGGYPGKYDPSVIGSLMARPPKLFISGHSHILKVKYDKTLDMLHINPGAAGMSGFHKVRTMVRFVIDNGTFKDLEVIE LAG
Sequences:
>Translated_163_residues MTRIGLLSDTHAYWDEKYLEYFESCDEIWHAGDIGSVEVAEKLAAFRPLRAVYGNIDGQEIRKMFPQVNRFTVDGAEVLI KHIGGYPGKYDPSVIGSLMARPPKLFISGHSHILKVKYDKTLDMLHINPGAAGMSGFHKVRTMVRFVIDNGTFKDLEVIE LAG >Mature_162_residues TRIGLLSDTHAYWDEKYLEYFESCDEIWHAGDIGSVEVAEKLAAFRPLRAVYGNIDGQEIRKMFPQVNRFTVDGAEVLIK HIGGYPGKYDPSVIGSLMARPPKLFISGHSHILKVKYDKTLDMLHINPGAAGMSGFHKVRTMVRFVIDNGTFKDLEVIEL AG
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18299; Mature: 18168
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIGLLSDTHAYWDEKYLEYFESCDEIWHAGDIGSVEVAEKLAAFRPLRAVYGNIDGQE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH IRKMFPQVNRFTVDGAEVLIKHIGGYPGKYDPSVIGSLMARPPKLFISGHSHILKVKYDK HHHHHHHHCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEEEECC TLDMLHINPGAAGMSGFHKVRTMVRFVIDNGTFKDLEVIELAG CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC >Mature Secondary Structure TRIGLLSDTHAYWDEKYLEYFESCDEIWHAGDIGSVEVAEKLAAFRPLRAVYGNIDGQE CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH IRKMFPQVNRFTVDGAEVLIKHIGGYPGKYDPSVIGSLMARPPKLFISGHSHILKVKYDK HHHHHHHHCEEEECHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEEEECC TLDMLHINPGAAGMSGFHKVRTMVRFVIDNGTFKDLEVIELAG CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA