| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347431
Identifier: 29347431
GI number: 29347431
Start: 2537883
End: 2538410
Strand: Reverse
Name: 29347431
Synonym: BT_2021
Alternate gene names: NA
Gene position: 2538410-2537883 (Counterclockwise)
Preceding gene: 29347433
Following gene: 29347428
Centisome position: 40.55
GC content: 53.41
Gene sequence:
>528_bases ATGCCATTAATTTACAAACCTTACCAGGCGAATATCGCCAACAAAGCGGGACAGAAACTGTATTACCCCCGCCTCGTGAA ATTCTCGAAAATGGTCAACACGCAGAAGATGGCGGAGCTGATCGCCGAGAAGGCTTCTCTGACACCGGGTGATGTCCACA ACGTGATTCGAAACTTGATGTCCGTGATGCGTGAACAGTTGCTCAACAGCCGCACAGTACGTCTCGAAGGCTTGGGCACA TTTACGATGATCGCCAAAGCCGGAGGAAAGGGAGTCGTGTTGGAAAGTAAAGTCAGCAGTTCGCAGATCGTTTCGCTGCG CTGTCAGTTTACTCCCGAATATACCCGTTCTGCCGATGGCGTCACTACCCGTGCACTGACTTCCGGAGTAGAATTTGTCC ACGTCAAGGACGTAGCGGGCGGCTTTGTGGACGACGATGATAAAAATCATTCGGGAGGCGGAGACAACCCCGGCGGAGGA AGCACTCCCGGAGGCGACGACGATGAGGCTCCGGACCCAACCGTTTAA
Upstream 100 bases:
>100_bases TGTATCCGGACTTTTTTGCCATCGCCTACTTTTGTCACCGTAATCGATTGCACATAGAAAACTTACATCAACCATTAAAA AAAGAAAGGAAAACAACCTT
Downstream 100 bases:
>100_bases TGAGGCTGAATCGCTGACTCACTAATGCATGATCGGTTCCCTTATTAAATTGCTCCATTCACTCTGTTTTTTAACTCTAA AGAAGGAAGCTATGAAATTA
Product: putative non-specific DNA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPLIYKPYQANIANKAGQKLYYPRLVKFSKMVNTQKMAELIAEKASLTPGDVHNVIRNLMSVMREQLLNSRTVRLEGLGT FTMIAKAGGKGVVLESKVSSSQIVSLRCQFTPEYTRSADGVTTRALTSGVEFVHVKDVAGGFVDDDDKNHSGGGDNPGGG STPGGDDDEAPDPTV
Sequences:
>Translated_175_residues MPLIYKPYQANIANKAGQKLYYPRLVKFSKMVNTQKMAELIAEKASLTPGDVHNVIRNLMSVMREQLLNSRTVRLEGLGT FTMIAKAGGKGVVLESKVSSSQIVSLRCQFTPEYTRSADGVTTRALTSGVEFVHVKDVAGGFVDDDDKNHSGGGDNPGGG STPGGDDDEAPDPTV >Mature_174_residues PLIYKPYQANIANKAGQKLYYPRLVKFSKMVNTQKMAELIAEKASLTPGDVHNVIRNLMSVMREQLLNSRTVRLEGLGTF TMIAKAGGKGVVLESKVSSSQIVSLRCQFTPEYTRSADGVTTRALTSGVEFVHVKDVAGGFVDDDDKNHSGGGDNPGGGS TPGGDDDEAPDPTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18746; Mature: 18615
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIYKPYQANIANKAGQKLYYPRLVKFSKMVNTQKMAELIAEKASLTPGDVHNVIRNLM CCCEECCHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SVMREQLLNSRTVRLEGLGTFTMIAKAGGKGVVLESKVSSSQIVSLRCQFTPEYTRSADG HHHHHHHHCCCEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCHHCCCCC VTTRALTSGVEFVHVKDVAGGFVDDDDKNHSGGGDNPGGGSTPGGDDDEAPDPTV CHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PLIYKPYQANIANKAGQKLYYPRLVKFSKMVNTQKMAELIAEKASLTPGDVHNVIRNLM CCEECCHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SVMREQLLNSRTVRLEGLGTFTMIAKAGGKGVVLESKVSSSQIVSLRCQFTPEYTRSADG HHHHHHHHCCCEEEEECCCCEEEEECCCCCCEEEECCCCCCEEEEEEEECCCCHHCCCCC VTTRALTSGVEFVHVKDVAGGFVDDDDKNHSGGGDNPGGGSTPGGDDDEAPDPTV CHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA