| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347387
Identifier: 29347387
GI number: 29347387
Start: 2487583
End: 2488572
Strand: Reverse
Name: 29347387
Synonym: BT_1977
Alternate gene names: NA
Gene position: 2488572-2487583 (Counterclockwise)
Preceding gene: 29347388
Following gene: 29347386
Centisome position: 39.75
GC content: 50.4
Gene sequence:
>990_bases ATGAAACAAGGGAAAATTTATATGAAAGCATGGCTGGATCTTCATGGCCGTGCAAAGGTGTTGGCGACGGATCACTGGTA TCTTGAATTTGCCAATCTTTTATTGCCTGTCGTCAGCGAATCTTATTTATATAAGTCGGAGACACAGGAAAGCCAGAATC AGGTGACTCTGATGCTGACTCTTTATCTGGAAGACTGTGTGACGGACGGAGGCAACTGGCGCCAGTTCATCCGTTGGCAT AAAAGGAATTACGGACGTTACCTGCCGTTTTATGAATTGTCGGAAGGTTATCTCACCGACGAGATCAATAAAGAGGATAT CGCTTTCTTGCTGTGGGGAATTAATTCGCCGGTAGGCGATGACTTTGACGGTGTGGAGAATCCCTTGGATGCGGACTTGC TGGAGTTTGCCGATGTGATCTATGCGCAGTTGGAGGATGTTTTCGAGAAAGCGCCTATCAGCGACGGACTTGCCGGAGAC TGGCTGATGGAATCGGAGCTGATGGAGAAGCAGCGGACTGCTTTGCCTGTTGCCTCGCCGGGCGATCAGTTGCCCGTGAA TGTGGAACGCTTTCTGAAAGCGAGTGGTGGCGAGCCGTTGATGTTCTTCGATTCGTATGAGGCTTTGAAACTGTTCTTTG TGCAGGCCCTGCAATGGGAGGACGAGGAAGATGCTCTGTTGCCCGACTTGAAGGAGTTTTCGGATTTCGTGATGTACGCT AATCCGAAAGGTTTGCTGATAGGTCCGGACGTAGCCCGCTACTTTGCCGACAAACGGAATCCGCTGTATAATGCGGAAAT GGCTGAGGAAGAGGCGTACGAACTTTTCTGCGAGGAAGGGCTGTGCCCGTTCGATCTGCTGAAGTACGGCATGGAACATG ACCTGCTGCCGGAAGCGCAATTCCCTTTCGAGAACGGGAAAGAGCTGCTGCACGAAAACTGGGACTTTATTGCCCGCTGG TTTTTGGGCGAGTATTACGAAGGAGAATGA
Upstream 100 bases:
>100_bases AAGTAATAAAACTGGCTTTGAAAAGACTGTAGAATAGGTAATAGGTAATAGGTAATAGGTAATAGGGCGTGGAGAAACTA AAACAAGCAACAGAATAATA
Downstream 100 bases:
>100_bases TACTTTGTTAAGTTATGCCAATCAAAAAAAGTAACAATCCGTTCGCCGGAAAGGCGAAGCCTGCTGCCGGAAAAAAGAAA GGGACGGGGAAACGGATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKQGKIYMKAWLDLHGRAKVLATDHWYLEFANLLLPVVSESYLYKSETQESQNQVTLMLTLYLEDCVTDGGNWRQFIRWH KRNYGRYLPFYELSEGYLTDEINKEDIAFLLWGINSPVGDDFDGVENPLDADLLEFADVIYAQLEDVFEKAPISDGLAGD WLMESELMEKQRTALPVASPGDQLPVNVERFLKASGGEPLMFFDSYEALKLFFVQALQWEDEEDALLPDLKEFSDFVMYA NPKGLLIGPDVARYFADKRNPLYNAEMAEEEAYELFCEEGLCPFDLLKYGMEHDLLPEAQFPFENGKELLHENWDFIARW FLGEYYEGE
Sequences:
>Translated_329_residues MKQGKIYMKAWLDLHGRAKVLATDHWYLEFANLLLPVVSESYLYKSETQESQNQVTLMLTLYLEDCVTDGGNWRQFIRWH KRNYGRYLPFYELSEGYLTDEINKEDIAFLLWGINSPVGDDFDGVENPLDADLLEFADVIYAQLEDVFEKAPISDGLAGD WLMESELMEKQRTALPVASPGDQLPVNVERFLKASGGEPLMFFDSYEALKLFFVQALQWEDEEDALLPDLKEFSDFVMYA NPKGLLIGPDVARYFADKRNPLYNAEMAEEEAYELFCEEGLCPFDLLKYGMEHDLLPEAQFPFENGKELLHENWDFIARW FLGEYYEGE >Mature_329_residues MKQGKIYMKAWLDLHGRAKVLATDHWYLEFANLLLPVVSESYLYKSETQESQNQVTLMLTLYLEDCVTDGGNWRQFIRWH KRNYGRYLPFYELSEGYLTDEINKEDIAFLLWGINSPVGDDFDGVENPLDADLLEFADVIYAQLEDVFEKAPISDGLAGD WLMESELMEKQRTALPVASPGDQLPVNVERFLKASGGEPLMFFDSYEALKLFFVQALQWEDEEDALLPDLKEFSDFVMYA NPKGLLIGPDVARYFADKRNPLYNAEMAEEEAYELFCEEGLCPFDLLKYGMEHDLLPEAQFPFENGKELLHENWDFIARW FLGEYYEGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38223; Mature: 38223
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQGKIYMKAWLDLHGRAKVLATDHWYLEFANLLLPVVSESYLYKSETQESQNQVTLMLT CCCCCEEHEEHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH LYLEDCVTDGGNWRQFIRWHKRNYGRYLPFYELSEGYLTDEINKEDIAFLLWGINSPVGD EEHHHHHCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCC DFDGVENPLDADLLEFADVIYAQLEDVFEKAPISDGLAGDWLMESELMEKQRTALPVASP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC GDQLPVNVERFLKASGGEPLMFFDSYEALKLFFVQALQWEDEEDALLPDLKEFSDFVMYA CCCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCEEEEE NPKGLLIGPDVARYFADKRNPLYNAEMAEEEAYELFCEEGLCPFDLLKYGMEHDLLPEAQ CCCCEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC FPFENGKELLHENWDFIARWFLGEYYEGE CCCCCCHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKQGKIYMKAWLDLHGRAKVLATDHWYLEFANLLLPVVSESYLYKSETQESQNQVTLMLT CCCCCEEHEEHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHH LYLEDCVTDGGNWRQFIRWHKRNYGRYLPFYELSEGYLTDEINKEDIAFLLWGINSPVGD EEHHHHHCCCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCC DFDGVENPLDADLLEFADVIYAQLEDVFEKAPISDGLAGDWLMESELMEKQRTALPVASP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC GDQLPVNVERFLKASGGEPLMFFDSYEALKLFFVQALQWEDEEDALLPDLKEFSDFVMYA CCCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCEEEEE NPKGLLIGPDVARYFADKRNPLYNAEMAEEEAYELFCEEGLCPFDLLKYGMEHDLLPEAQ CCCCEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCC FPFENGKELLHENWDFIARWFLGEYYEGE CCCCCCHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA