| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347386
Identifier: 29347386
GI number: 29347386
Start: 2486036
End: 2486689
Strand: Reverse
Name: 29347386
Synonym: BT_1976
Alternate gene names: NA
Gene position: 2486689-2486036 (Counterclockwise)
Preceding gene: 29347387
Following gene: 29347385
Centisome position: 39.72
GC content: 46.48
Gene sequence:
>654_bases ATGATGGATATTGCCGGCTCCGCAATAAATGGAAGTCATGCTCATAATTCCCTGCTCGCTCACTTGGAAGCGAAGGAAGG AACGATGGAGATTCTTCTCGATGGCTTGTGTAGGCCATATGTAGTTACCCACTTGCTGATATTCGGCATCTTTCTCCAGG GTGTACTTGCCTTTGATGGCGTCAAACGCTGCTTGCTTTGCCTGGAGAGCACTGTCCAGAAAGGCCAGAATCTCTTGTTG AGCCTTGAGTTCCACATCCAGCATCAATTCCTGACCGGCTTTGCGGGCCTCGAATGCTTTGGGATACAAAATCTTGATAC TGTCGATTTGTGTCTTTGCTTCTTCGTAGTCGCCACGTTCGTAGGCAGCACGGGCAATCGTCAGTTTTTCATTGGCTTTT TTCTCGATGCCGTTTCCGCAGGCTGTCAGTGCCAGCGTGCCGCAAAAGAAGATAATCAGTTTTTTCATCATACCATTTAC ATTTTACTATTAGACGATTTGCGATGGAGATGGGACGTGCAGTGTTCACGACTTACCGCCAACTGTTCGTTACTTGCGGT TTGCCGTTCGTGTTACTTGCCGTTTACCGTTCCTCGCCCGTTCATCGTTTACTTTATAGCGACAAAAATACAAATATATC CCTTATTTTTGTAA
Upstream 100 bases:
>100_bases CTTTTTCTATTTTCTCGTTCATATCCGATGTTTCGTAGCTGTCCTTCGAAGTCGGAGTTTCGGCAAAACTGCCGTCGGGA GTCATCACTTTGACGCCTAC
Downstream 100 bases:
>100_bases TTTTGCCCCCTCAAAACTTGTATTGGCAATAAGTGTTTGATGATTATGGACCGCCCGACCGGTGTTTTCATCAACTATTT AACTGTCTGTTGCCAGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MMDIAGSAINGSHAHNSLLAHLEAKEGTMEILLDGLCRPYVVTHLLIFGIFLQGVLAFDGVKRCLLCLESTVQKGQNLLL SLEFHIQHQFLTGFAGLECFGIQNLDTVDLCLCFFVVATFVGSTGNRQFFIGFFLDAVSAGCQCQRAAKEDNQFFHHTIY ILLLDDLRWRWDVQCSRLTANCSLLAVCRSCYLPFTVPRPFIVYFIATKIQIYPLFL
Sequences:
>Translated_217_residues MMDIAGSAINGSHAHNSLLAHLEAKEGTMEILLDGLCRPYVVTHLLIFGIFLQGVLAFDGVKRCLLCLESTVQKGQNLLL SLEFHIQHQFLTGFAGLECFGIQNLDTVDLCLCFFVVATFVGSTGNRQFFIGFFLDAVSAGCQCQRAAKEDNQFFHHTIY ILLLDDLRWRWDVQCSRLTANCSLLAVCRSCYLPFTVPRPFIVYFIATKIQIYPLFL >Mature_217_residues MMDIAGSAINGSHAHNSLLAHLEAKEGTMEILLDGLCRPYVVTHLLIFGIFLQGVLAFDGVKRCLLCLESTVQKGQNLLL SLEFHIQHQFLTGFAGLECFGIQNLDTVDLCLCFFVVATFVGSTGNRQFFIGFFLDAVSAGCQCQRAAKEDNQFFHHTIY ILLLDDLRWRWDVQCSRLTANCSLLAVCRSCYLPFTVPRPFIVYFIATKIQIYPLFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24413; Mature: 24413
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDIAGSAINGSHAHNSLLAHLEAKEGTMEILLDGLCRPYVVTHLLIFGIFLQGVLAFDG CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VKRCLLCLESTVQKGQNLLLSLEFHIQHQFLTGFAGLECFGIQNLDTVDLCLCFFVVATF HHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHH VGSTGNRQFFIGFFLDAVSAGCQCQRAAKEDNQFFHHTIYILLLDDLRWRWDVQCSRLTA HCCCCCCEEEHHHHHHHHHCCCHHHHHHHHCCHHHHHHEEEEEECCCCCEECCEEHHHHC NCSLLAVCRSCYLPFTVPRPFIVYFIATKIQIYPLFL CHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEECC >Mature Secondary Structure MMDIAGSAINGSHAHNSLLAHLEAKEGTMEILLDGLCRPYVVTHLLIFGIFLQGVLAFDG CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VKRCLLCLESTVQKGQNLLLSLEFHIQHQFLTGFAGLECFGIQNLDTVDLCLCFFVVATF HHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHH VGSTGNRQFFIGFFLDAVSAGCQCQRAAKEDNQFFHHTIYILLLDDLRWRWDVQCSRLTA HCCCCCCEEEHHHHHHHHHCCCHHHHHHHHCCHHHHHHEEEEEECCCCCEECCEEHHHHC NCSLLAVCRSCYLPFTVPRPFIVYFIATKIQIYPLFL CHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA