| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347366
Identifier: 29347366
GI number: 29347366
Start: 2457295
End: 2459076
Strand: Reverse
Name: 29347366
Synonym: BT_1956
Alternate gene names: NA
Gene position: 2459076-2457295 (Counterclockwise)
Preceding gene: 29347367
Following gene: 29347365
Centisome position: 39.28
GC content: 47.14
Gene sequence:
>1782_bases ATGCATCGTTTTCACTATTTTATTATTTCTGCCTGTATGCTGTTCACCTCCTGCAACAAGGATGAAGTCATTACCGAAGA AGTAGGAGGACAACCTATAATAGAACTTGACAGCGAGACCGGTATTTACACTGTCAAGGTCGATCACGAATTGACTATCG CCCCGACATACCAGAATGTTGAAGATGCTCTTTTTGCTTGGACGATAGACGGTACGCTGGTTTCTTCGGGTCCGTCTCTT CAACGTACATGGAATGAATGCGGGGATTTTTATGTCAAACTAAGAGTAGACAATGCGGAAGGTTATGCCGAAGAGGAACT GAAAGTAGAAGTGAAAGAACTCACCCCTCCGGTCATCTCACTGGCACTACCTTCGCAGGGGCTAAAAGTCGTCCGGAATA CCGATTACACATTTACTCCCGATATTCAGCATTCGGATGTCGAAGGGTTCAAAATCGAATGGGTACGGGAAGGAAAAATC GTTTCCACCGAGAATACTTATACTTTCAATGAAAAAGAACTCGGTGTTTATACGGTGACAATCAACGCTTCCAATATAGA TGGGACAACAACGAAAGACGTAAGCGTAGAGGTCGTGGAAACGATGCCCTACGTTGTCAAATTCCCGACCCCGTCTTACC TGCAAACATCCACGGACAGGTACACTTTTGCCGACCGTCCTGTTTTCCTGCGTCCGTTGTTGGAGTATTTCGACAATCCC CGTTTTGAGTGGAGTGTGGACGGTCAGGTCATGGAAGGAGAAGTGGAACGCATGTTCAAGTTCACGCCGTCCGCACCCGG AGAATACACCGTCTCCTGTACTGTGTCGGAAGACACACCGACGGAAAAAATAAGCAGGAATATCGACAAAGGGAAAACGG CTGTCACTGCCACCGTAAAAGTCGTTTGTGTGGACAAAAAGGAACAAGACGGCTTCCGGGCTTCGGGAAGTTCCAAGCTC TGGAATAAAGTCTATGAATATACCCCAGCTCCCGGCCAATTTATCAACGAGACGAGCACGATAGGCGGTATGACCGGCAA CGAAACATCCCCTGAAGCGGCTGTCGCATGGGCAACACAGCGTTTGAAAGACAAACTGCACGTCTCTTTAGGTTCTTTCG GGGGTTATATCATCGTCGGCTTCGACCACAGTATTCCCAATTCGGGTAACCAATATGATTTCTGTGTTCAGGGGAACGCC TTTGACGGCAGTTCCGAACCGGGTATCGTATGGGTCATGCAAGATATAAACGGAAACGGATTGCCGGATGACGAGTGGTA CGAACTGAAAGGATCTGAAGCAGGCAAGGAAGAAACAATACAGAATTTTGAAGTGACCTATTACCGTCCGGAAGGCAAAA AAATGGATGTCCAATGGATCAGTTCCGACGGTAGAAACGGCTGGGTAGACTATCTGTCCGCTTATCATACACAAGACTAT TATTATCCGGCTTGGATTTCGGAAAACAGTTATACCCTGACAGGCACTTGTCTGGCCGCCCGCAACACCCAAGATTCTCA AACCGGTTATTGGGATAATCAGAGTTATGACTGGGGGTACGTGGATAATTTCGGAAACGACCAGATAGAAGGCGGCAGTA CGGTGGATGGAAGCGGACAAAGGAACGGTTTCAAAATTTCCAATGCCATCCATGCCGATGGAACGGAAGCCAATCTGCAA TATATTGACTTTATCAAAATACAATGCGGTGTTCTGGCCAAAAGCGGCTGGCTGGGCGAAGTTTCTACGGAGGTATTTTC TTTTGAGGATCTAACCAAATAA
Upstream 100 bases:
>100_bases GCTTATATCTGTATTGATGATATCACCATACAATAAAAAGAATACAAGGATATCCCTTCTGTCGGGGGTATCCCTGTTAT TTTTCTAAAATCCACACATC
Downstream 100 bases:
>100_bases TAAAAATTACAAGTATGAAAATTTATTTTCTTCCCATGCTCCTATCCTTGTTCTTTTTGGGAGCGTGTGACAAAAACGAT GAAATTATACCTGAAGATGC
Product: putative cell surface protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MHRFHYFIISACMLFTSCNKDEVITEEVGGQPIIELDSETGIYTVKVDHELTIAPTYQNVEDALFAWTIDGTLVSSGPSL QRTWNECGDFYVKLRVDNAEGYAEEELKVEVKELTPPVISLALPSQGLKVVRNTDYTFTPDIQHSDVEGFKIEWVREGKI VSTENTYTFNEKELGVYTVTINASNIDGTTTKDVSVEVVETMPYVVKFPTPSYLQTSTDRYTFADRPVFLRPLLEYFDNP RFEWSVDGQVMEGEVERMFKFTPSAPGEYTVSCTVSEDTPTEKISRNIDKGKTAVTATVKVVCVDKKEQDGFRASGSSKL WNKVYEYTPAPGQFINETSTIGGMTGNETSPEAAVAWATQRLKDKLHVSLGSFGGYIIVGFDHSIPNSGNQYDFCVQGNA FDGSSEPGIVWVMQDINGNGLPDDEWYELKGSEAGKEETIQNFEVTYYRPEGKKMDVQWISSDGRNGWVDYLSAYHTQDY YYPAWISENSYTLTGTCLAARNTQDSQTGYWDNQSYDWGYVDNFGNDQIEGGSTVDGSGQRNGFKISNAIHADGTEANLQ YIDFIKIQCGVLAKSGWLGEVSTEVFSFEDLTK
Sequences:
>Translated_593_residues MHRFHYFIISACMLFTSCNKDEVITEEVGGQPIIELDSETGIYTVKVDHELTIAPTYQNVEDALFAWTIDGTLVSSGPSL QRTWNECGDFYVKLRVDNAEGYAEEELKVEVKELTPPVISLALPSQGLKVVRNTDYTFTPDIQHSDVEGFKIEWVREGKI VSTENTYTFNEKELGVYTVTINASNIDGTTTKDVSVEVVETMPYVVKFPTPSYLQTSTDRYTFADRPVFLRPLLEYFDNP RFEWSVDGQVMEGEVERMFKFTPSAPGEYTVSCTVSEDTPTEKISRNIDKGKTAVTATVKVVCVDKKEQDGFRASGSSKL WNKVYEYTPAPGQFINETSTIGGMTGNETSPEAAVAWATQRLKDKLHVSLGSFGGYIIVGFDHSIPNSGNQYDFCVQGNA FDGSSEPGIVWVMQDINGNGLPDDEWYELKGSEAGKEETIQNFEVTYYRPEGKKMDVQWISSDGRNGWVDYLSAYHTQDY YYPAWISENSYTLTGTCLAARNTQDSQTGYWDNQSYDWGYVDNFGNDQIEGGSTVDGSGQRNGFKISNAIHADGTEANLQ YIDFIKIQCGVLAKSGWLGEVSTEVFSFEDLTK >Mature_593_residues MHRFHYFIISACMLFTSCNKDEVITEEVGGQPIIELDSETGIYTVKVDHELTIAPTYQNVEDALFAWTIDGTLVSSGPSL QRTWNECGDFYVKLRVDNAEGYAEEELKVEVKELTPPVISLALPSQGLKVVRNTDYTFTPDIQHSDVEGFKIEWVREGKI VSTENTYTFNEKELGVYTVTINASNIDGTTTKDVSVEVVETMPYVVKFPTPSYLQTSTDRYTFADRPVFLRPLLEYFDNP RFEWSVDGQVMEGEVERMFKFTPSAPGEYTVSCTVSEDTPTEKISRNIDKGKTAVTATVKVVCVDKKEQDGFRASGSSKL WNKVYEYTPAPGQFINETSTIGGMTGNETSPEAAVAWATQRLKDKLHVSLGSFGGYIIVGFDHSIPNSGNQYDFCVQGNA FDGSSEPGIVWVMQDINGNGLPDDEWYELKGSEAGKEETIQNFEVTYYRPEGKKMDVQWISSDGRNGWVDYLSAYHTQDY YYPAWISENSYTLTGTCLAARNTQDSQTGYWDNQSYDWGYVDNFGNDQIEGGSTVDGSGQRNGFKISNAIHADGTEANLQ YIDFIKIQCGVLAKSGWLGEVSTEVFSFEDLTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66388; Mature: 66388
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRFHYFIISACMLFTSCNKDEVITEEVGGQPIIELDSETGIYTVKVDHELTIAPTYQNV CCEEHHHHHHHHHHHHCCCCCCEEHHHCCCCEEEEECCCCCEEEEEECCEEEEEECCCCC EDALFAWTIDGTLVSSGPSLQRTWNECGDFYVKLRVDNAEGYAEEELKVEVKELTPPVIS CCEEEEEEECCEEECCCCCHHHHHHCCCCEEEEEEEECCCCCCCHHHEEEHHHCCCCEEE LALPSQGLKVVRNTDYTFTPDIQHSDVEGFKIEWVREGKIVSTENTYTFNEKELGVYTVT EECCCCCCEEEECCCCEECCCCCCCCCCCEEEEEEECCEEEECCCEEEECCCCCEEEEEE INASNIDGTTTKDVSVEVVETMPYVVKFPTPSYLQTSTDRYTFADRPVFLRPLLEYFDNP EECCCCCCCCCCCEEEEEEECCCEEEECCCCCCEECCCCCEEECCCCCHHHHHHHHHCCC RFEWSVDGQVMEGEVERMFKFTPSAPGEYTVSCTVSEDTPTEKISRNIDKGKTAVTATVK CEEEEECCEEECCHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEEEEE VVCVDKKEQDGFRASGSSKLWNKVYEYTPAPGQFINETSTIGGMTGNETSPEAAVAWATQ EEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCHHCCCCCCCCCCCCHHHHHHHH RLKDKLHVSLGSFGGYIIVGFDHSIPNSGNQYDFCVQGNAFDGSSEPGIVWVMQDINGNG HHHHHEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC LPDDEWYELKGSEAGKEETIQNFEVTYYRPEGKKMDVQWISSDGRNGWVDYLSAYHTQDY CCCCCEEEECCCCCCCHHHHCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCCE YYPAWISENSYTLTGTCLAARNTQDSQTGYWDNQSYDWGYVDNFGNDQIEGGSTVDGSGQ EEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC RNGFKISNAIHADGTEANLQYIDFIKIQCGVLAKSGWLGEVSTEVFSFEDLTK CCCEEEECEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHEECHHHCCC >Mature Secondary Structure MHRFHYFIISACMLFTSCNKDEVITEEVGGQPIIELDSETGIYTVKVDHELTIAPTYQNV CCEEHHHHHHHHHHHHCCCCCCEEHHHCCCCEEEEECCCCCEEEEEECCEEEEEECCCCC EDALFAWTIDGTLVSSGPSLQRTWNECGDFYVKLRVDNAEGYAEEELKVEVKELTPPVIS CCEEEEEEECCEEECCCCCHHHHHHCCCCEEEEEEEECCCCCCCHHHEEEHHHCCCCEEE LALPSQGLKVVRNTDYTFTPDIQHSDVEGFKIEWVREGKIVSTENTYTFNEKELGVYTVT EECCCCCCEEEECCCCEECCCCCCCCCCCEEEEEEECCEEEECCCEEEECCCCCEEEEEE INASNIDGTTTKDVSVEVVETMPYVVKFPTPSYLQTSTDRYTFADRPVFLRPLLEYFDNP EECCCCCCCCCCCEEEEEEECCCEEEECCCCCCEECCCCCEEECCCCCHHHHHHHHHCCC RFEWSVDGQVMEGEVERMFKFTPSAPGEYTVSCTVSEDTPTEKISRNIDKGKTAVTATVK CEEEEECCEEECCHHHHHEEECCCCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEEEEE VVCVDKKEQDGFRASGSSKLWNKVYEYTPAPGQFINETSTIGGMTGNETSPEAAVAWATQ EEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCHHCCCCCCCCCCCCHHHHHHHH RLKDKLHVSLGSFGGYIIVGFDHSIPNSGNQYDFCVQGNAFDGSSEPGIVWVMQDINGNG HHHHHEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCC LPDDEWYELKGSEAGKEETIQNFEVTYYRPEGKKMDVQWISSDGRNGWVDYLSAYHTQDY CCCCCEEEECCCCCCCHHHHCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCCCE YYPAWISENSYTLTGTCLAARNTQDSQTGYWDNQSYDWGYVDNFGNDQIEGGSTVDGSGQ EEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC RNGFKISNAIHADGTEANLQYIDFIKIQCGVLAKSGWLGEVSTEVFSFEDLTK CCCEEEECEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA