| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347365
Identifier: 29347365
GI number: 29347365
Start: 2455190
End: 2457280
Strand: Reverse
Name: 29347365
Synonym: BT_1955
Alternate gene names: NA
Gene position: 2457280-2455190 (Counterclockwise)
Preceding gene: 29347366
Following gene: 29347364
Centisome position: 39.25
GC content: 43.23
Gene sequence:
>2091_bases ATGAAAATTTATTTTCTTCCCATGCTCCTATCCTTGTTCTTTTTGGGAGCGTGTGACAAAAACGATGAAATTATACCTGA AGATGCAGATGAAAATTTCATCACATCGGTCGTGATGACCGTGGACGGGAAATCGTACACGGCCGACATTACGGACAATA CAGTAACAATAACCGTTCCCTATACGGTATCGCTGAACAACGCCGAAGTGGAATTCAAGTACACAACTTCTGCAACAATC ATACCTGATCCTGAAACGGTAACGGACTGGGATAACGAACGAACCTTCCGGGTGACATCCTATAACGGAGATGCCCGCGA ATATACCTATAAGGTCGTGAAAAGCGAGATAGAATCTGACGGAGATGTGGAGTTGAAGACCACCGAGGAGGTAGCTTCTT TTGCCGCAACCAAAACAACCGTTGTCAAAGGGAACCTGATTATCGGCTCTGATGCGGAAGAGGCAGAAAAAATCACTGAC ATATCTGCATTGGCATCTTTGAAAGAGGTTACTGGCAACATTGTCATTCGTAACAGTTACAACGGTGCAGACTTGACAGG GTTGGATAATATCGTTTCTGCCGGAGGTTTACAGGTAGGTTCGACCGATGTCGCCTCGAAAGCTACGGAACTTCACATGA TTTCCATGAAAGCATTGGAAACGCTCTCCGGAGACATATCGGTATATAACGACCAAGTGACGTATGTCCTATTCGAGAAA CTGGCAACTATTGAAGGAAGCGTGATGTTCAATGCGTCGTCGTTACAGAGTTTTGAGTTTCCGGTTCTGACTACTGTAGG TCAGGATCTGAATCTTCAAGGACTCAATGAAGAGAACACAGCAGCCGGTTCGATTGCGTCTTTGGAAATACCGGAACTGA CAAGTGTCGGAGGGGTCTTGTCCGTAAACAATCTTGCCAAGCTGACTTCCATGAGCTTCCTTAAGCTGAAAGAGACCGGT GGCCTTGATTTCCATACCGTCCCCGTGATGTTGGAAACCATCAACCTTCCGGAAATCGAAACAGTAAACGGAAGTATTAT TATGGAAGCCAATATGGAAGCTCCTCCTACCGGTAGTTTTGTTCCCCAACGAAATGACGTGCTTCAGGCTTTCGGTGGAA TGGACAAACTGACAACGATAAAGGGACAGATAAAGATAAAGAATTTCACGGCACTCAAACAACTTCCCGACTGGAGCAAG ATCACCACACTTGGAAGCATCACGCTGGATTATCTTGAAGATGTGAGCGGAACACTGCTGTTGCCGAACGCCCGATTTGA AACCTTCGGAGAAACAGCGCCCCAGATTGAAATTATAAACAAGGTGCAGCTCTCCAAAATTGAAACAGCCGAAGATTTGT CAAATGTAAATTTTGTCATCACCAGTCTCACGAATAATAAGTTCCCTGAAATCACGTTCAAGAATATCAAAGACTTCACT TGTAAGCCAACCACCAACAATACCGATTATACCATATCGACAATTCAACATGTATATGGAAATCTAAATGTGACAGGCCA AATGCGAAGCAATGCCAAATTTCCCGACTTGGAAATCATAGATGGATATGGATATATCCAAATACCCATGTTTGCTTCAA TCACAATGCCAGTCTTGAAAGAAGTGGGAGGACAGTTCTATTTATCTGGAAATTTTACCAGTTGTAACTTGCCCTTACTA TCCAAAGTTTGTTGTTCAGCTTCTCCTGTATATTATAAAGAGGGAGAGGGTTCGTTAGCAATATCTTTACAAAGTAAATC GCTGGATATTCCGGAATTGCTTCACGTAGGAGGTGAAGGGTTGTTCGTTAATAAAGCAACAGGCATTACTTGTGATAAAT TACAGACTATAGATGGTACGCTACAGATAAAAAGTGCGACTTCTCTTTCTCAGGAAACACTTTCCATGGAGAAGTTGGAG ACCTTGCATGGGGTTGTTTTTGACGGTTTGACGAAATTTACCGACTACACTTTCTTCGGCAAGTTTATAGAAAACGGAAT GATTACGGGGGAAAGTTGGAGCGTGACGAAATGTGGGTATAACCCAACCTTCCAAAATATGAAGGACAAACAATATACGC AGCAGGATTAA
Upstream 100 bases:
>100_bases AAATACAATGCGGTGTTCTGGCCAAAAGCGGCTGGCTGGGCGAAGTTTCTACGGAGGTATTTTCTTTTGAGGATCTAACC AAATAATAAAAATTACAAGT
Downstream 100 bases:
>100_bases ACCTTATACCTTAACCAGAGTACCCGTAATGATTCGGGTACTCTTTTTTATCCGAATGACAATGAGCAGAACAATACAAC GGATTTGCCTTTTTCTTTTC
Product: putative cell wall biogenesis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 696; Mature: 696
Protein sequence:
>696_residues MKIYFLPMLLSLFFLGACDKNDEIIPEDADENFITSVVMTVDGKSYTADITDNTVTITVPYTVSLNNAEVEFKYTTSATI IPDPETVTDWDNERTFRVTSYNGDAREYTYKVVKSEIESDGDVELKTTEEVASFAATKTTVVKGNLIIGSDAEEAEKITD ISALASLKEVTGNIVIRNSYNGADLTGLDNIVSAGGLQVGSTDVASKATELHMISMKALETLSGDISVYNDQVTYVLFEK LATIEGSVMFNASSLQSFEFPVLTTVGQDLNLQGLNEENTAAGSIASLEIPELTSVGGVLSVNNLAKLTSMSFLKLKETG GLDFHTVPVMLETINLPEIETVNGSIIMEANMEAPPTGSFVPQRNDVLQAFGGMDKLTTIKGQIKIKNFTALKQLPDWSK ITTLGSITLDYLEDVSGTLLLPNARFETFGETAPQIEIINKVQLSKIETAEDLSNVNFVITSLTNNKFPEITFKNIKDFT CKPTTNNTDYTISTIQHVYGNLNVTGQMRSNAKFPDLEIIDGYGYIQIPMFASITMPVLKEVGGQFYLSGNFTSCNLPLL SKVCCSASPVYYKEGEGSLAISLQSKSLDIPELLHVGGEGLFVNKATGITCDKLQTIDGTLQIKSATSLSQETLSMEKLE TLHGVVFDGLTKFTDYTFFGKFIENGMITGESWSVTKCGYNPTFQNMKDKQYTQQD
Sequences:
>Translated_696_residues MKIYFLPMLLSLFFLGACDKNDEIIPEDADENFITSVVMTVDGKSYTADITDNTVTITVPYTVSLNNAEVEFKYTTSATI IPDPETVTDWDNERTFRVTSYNGDAREYTYKVVKSEIESDGDVELKTTEEVASFAATKTTVVKGNLIIGSDAEEAEKITD ISALASLKEVTGNIVIRNSYNGADLTGLDNIVSAGGLQVGSTDVASKATELHMISMKALETLSGDISVYNDQVTYVLFEK LATIEGSVMFNASSLQSFEFPVLTTVGQDLNLQGLNEENTAAGSIASLEIPELTSVGGVLSVNNLAKLTSMSFLKLKETG GLDFHTVPVMLETINLPEIETVNGSIIMEANMEAPPTGSFVPQRNDVLQAFGGMDKLTTIKGQIKIKNFTALKQLPDWSK ITTLGSITLDYLEDVSGTLLLPNARFETFGETAPQIEIINKVQLSKIETAEDLSNVNFVITSLTNNKFPEITFKNIKDFT CKPTTNNTDYTISTIQHVYGNLNVTGQMRSNAKFPDLEIIDGYGYIQIPMFASITMPVLKEVGGQFYLSGNFTSCNLPLL SKVCCSASPVYYKEGEGSLAISLQSKSLDIPELLHVGGEGLFVNKATGITCDKLQTIDGTLQIKSATSLSQETLSMEKLE TLHGVVFDGLTKFTDYTFFGKFIENGMITGESWSVTKCGYNPTFQNMKDKQYTQQD >Mature_696_residues MKIYFLPMLLSLFFLGACDKNDEIIPEDADENFITSVVMTVDGKSYTADITDNTVTITVPYTVSLNNAEVEFKYTTSATI IPDPETVTDWDNERTFRVTSYNGDAREYTYKVVKSEIESDGDVELKTTEEVASFAATKTTVVKGNLIIGSDAEEAEKITD ISALASLKEVTGNIVIRNSYNGADLTGLDNIVSAGGLQVGSTDVASKATELHMISMKALETLSGDISVYNDQVTYVLFEK LATIEGSVMFNASSLQSFEFPVLTTVGQDLNLQGLNEENTAAGSIASLEIPELTSVGGVLSVNNLAKLTSMSFLKLKETG GLDFHTVPVMLETINLPEIETVNGSIIMEANMEAPPTGSFVPQRNDVLQAFGGMDKLTTIKGQIKIKNFTALKQLPDWSK ITTLGSITLDYLEDVSGTLLLPNARFETFGETAPQIEIINKVQLSKIETAEDLSNVNFVITSLTNNKFPEITFKNIKDFT CKPTTNNTDYTISTIQHVYGNLNVTGQMRSNAKFPDLEIIDGYGYIQIPMFASITMPVLKEVGGQFYLSGNFTSCNLPLL SKVCCSASPVYYKEGEGSLAISLQSKSLDIPELLHVGGEGLFVNKATGITCDKLQTIDGTLQIKSATSLSQETLSMEKLE TLHGVVFDGLTKFTDYTFFGKFIENGMITGESWSVTKCGYNPTFQNMKDKQYTQQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76013; Mature: 76013
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYFLPMLLSLFFLGACDKNDEIIPEDADENFITSVVMTVDGKSYTADITDNTVTITVP CEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCEEEEEEE YTVSLNNAEVEFKYTTSATIIPDPETVTDWDNERTFRVTSYNGDAREYTYKVVKSEIESD EEEEECCCEEEEEEECCEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC GDVELKTTEEVASFAATKTTVVKGNLIIGSDAEEAEKITDISALASLKEVTGNIVIRNSY CCEEEEEHHHHHHHHHCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC NGADLTGLDNIVSAGGLQVGSTDVASKATELHMISMKALETLSGDISVYNDQVTYVLFEK CCCCCCCHHHHHHCCCEEECCCHHHCCHHHEEEEHHHHHHHCCCCEEEECCCCHHHHHHH LATIEGSVMFNASSLQSFEFPVLTTVGQDLNLQGLNEENTAAGSIASLEIPELTSVGGVL HHHCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCEE SVNNLAKLTSMSFLKLKETGGLDFHTVPVMLETINLPEIETVNGSIIMEANMEAPPTGSF EHHHHHHHHHCEEEEEECCCCCCEEEEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCC VPQRNDVLQAFGGMDKLTTIKGQIKIKNFTALKQLPDWSKITTLGSITLDYLEDVSGTLL CCCCHHHHHHHCCCCCEEEEEEEEEEECCHHHHHCCCCHHHEEEHHHHHHHHHCCCCEEE LPNARFETFGETAPQIEIINKVQLSKIETAEDLSNVNFVITSLTNNKFPEITFKNIKDFT ECCCCHHHCCCCCCCEEEECHHHHHHCCCHHHCCCCEEEEEEECCCCCCCEEECCCCCCE CKPTTNNTDYTISTIQHVYGNLNVTGQMRSNAKFPDLEIIDGYGYIQIPMFASITMPVLK ECCCCCCCCEEHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCEEEECHHHHHHHHHHH EVGGQFYLSGNFTSCNLPLLSKVCCSASPVYYKEGEGSLAISLQSKSLDIPELLHVGGEG HCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCHHHHHCCCCE LFVNKATGITCDKLQTIDGTLQIKSATSLSQETLSMEKLETLHGVVFDGLTKFTDYTFFG EEEECCCCCCHHHEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFIENGMITGESWSVTKCGYNPTFQNMKDKQYTQQD HHHHCCEEECCCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKIYFLPMLLSLFFLGACDKNDEIIPEDADENFITSVVMTVDGKSYTADITDNTVTITVP CEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCEEEEEEE YTVSLNNAEVEFKYTTSATIIPDPETVTDWDNERTFRVTSYNGDAREYTYKVVKSEIESD EEEEECCCEEEEEEECCEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC GDVELKTTEEVASFAATKTTVVKGNLIIGSDAEEAEKITDISALASLKEVTGNIVIRNSY CCEEEEEHHHHHHHHHCEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECC NGADLTGLDNIVSAGGLQVGSTDVASKATELHMISMKALETLSGDISVYNDQVTYVLFEK CCCCCCCHHHHHHCCCEEECCCHHHCCHHHEEEEHHHHHHHCCCCEEEECCCCHHHHHHH LATIEGSVMFNASSLQSFEFPVLTTVGQDLNLQGLNEENTAAGSIASLEIPELTSVGGVL HHHCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCEE SVNNLAKLTSMSFLKLKETGGLDFHTVPVMLETINLPEIETVNGSIIMEANMEAPPTGSF EHHHHHHHHHCEEEEEECCCCCCEEEEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCC VPQRNDVLQAFGGMDKLTTIKGQIKIKNFTALKQLPDWSKITTLGSITLDYLEDVSGTLL CCCCHHHHHHHCCCCCEEEEEEEEEEECCHHHHHCCCCHHHEEEHHHHHHHHHCCCCEEE LPNARFETFGETAPQIEIINKVQLSKIETAEDLSNVNFVITSLTNNKFPEITFKNIKDFT ECCCCHHHCCCCCCCEEEECHHHHHHCCCHHHCCCCEEEEEEECCCCCCCEEECCCCCCE CKPTTNNTDYTISTIQHVYGNLNVTGQMRSNAKFPDLEIIDGYGYIQIPMFASITMPVLK ECCCCCCCCEEHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCEEEECHHHHHHHHHHH EVGGQFYLSGNFTSCNLPLLSKVCCSASPVYYKEGEGSLAISLQSKSLDIPELLHVGGEG HCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCHHHHHCCCCE LFVNKATGITCDKLQTIDGTLQIKSATSLSQETLSMEKLETLHGVVFDGLTKFTDYTFFG EEEECCCCCCHHHEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KFIENGMITGESWSVTKCGYNPTFQNMKDKQYTQQD HHHHCCEEECCCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA