| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347359
Identifier: 29347359
GI number: 29347359
Start: 2448514
End: 2449080
Strand: Reverse
Name: 29347359
Synonym: BT_1949
Alternate gene names: NA
Gene position: 2449080-2448514 (Counterclockwise)
Preceding gene: 29347360
Following gene: 29347357
Centisome position: 39.12
GC content: 39.86
Gene sequence:
>567_bases ATGAGTATATACACTGTAGAAAATTTTACTTCAGACATCACTGTTGAAGGATACATCGCCGAATTTCGTGACGAACTACA TTTTCTTGAACTTTGCAAACAATGTACCAATTACGGTAAAAGTTGGGGGTGTCCTCCATTTGATTTTGATACGGAATCGT TTCTCCGACAATACAAGTATGCACATCTTATGGCAACGAAGATAATCCCTGAAGACAAAGATATTCCGATTGAATATACA CAAAAACTCATTTTACCGGAACGGATACGAATCGAGAGCGAATTATTGGATATGGAACGGAAATATGGAGGGCGTTCATT TGCCTATATAGGTAAATGTCTTCACTGCTCAGATAACGAGTGTACGCGTAACTGCGGCACACCATGCCGACACCCGGAAA AAGTGCGTCCGTCACTCGAAGCCTTCGGATTTGACATAGCCAAAACGCTTTCTGAACTTTTTAACATCGAACTTCTTTGG GGAAAGGATGGCAAATTACCTGAATATCTTGTTCTCGTAAGCGGATTTTTTCATAATGAATACGAACTTTGCAACATAGC ATACTAA
Upstream 100 bases:
>100_bases TGACCGCGTCTGAAATGCAGAAAAGCGGATACATTGACAGACTTTTCCAAAATGAAAACATCCGTTTCGACTCCTTATGC GGTACAATGATTTTGAAACA
Downstream 100 bases:
>100_bases TGATTCGGACATGAAATAAACAGACAAACTAACCACATTCGGTTCAATCTGTTTTGTGATTTCAAATGAATTATAGTTAG ATATGTAAAAAGCGACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSIYTVENFTSDITVEGYIAEFRDELHFLELCKQCTNYGKSWGCPPFDFDTESFLRQYKYAHLMATKIIPEDKDIPIEYT QKLILPERIRIESELLDMERKYGGRSFAYIGKCLHCSDNECTRNCGTPCRHPEKVRPSLEAFGFDIAKTLSELFNIELLW GKDGKLPEYLVLVSGFFHNEYELCNIAY
Sequences:
>Translated_188_residues MSIYTVENFTSDITVEGYIAEFRDELHFLELCKQCTNYGKSWGCPPFDFDTESFLRQYKYAHLMATKIIPEDKDIPIEYT QKLILPERIRIESELLDMERKYGGRSFAYIGKCLHCSDNECTRNCGTPCRHPEKVRPSLEAFGFDIAKTLSELFNIELLW GKDGKLPEYLVLVSGFFHNEYELCNIAY >Mature_187_residues SIYTVENFTSDITVEGYIAEFRDELHFLELCKQCTNYGKSWGCPPFDFDTESFLRQYKYAHLMATKIIPEDKDIPIEYTQ KLILPERIRIESELLDMERKYGGRSFAYIGKCLHCSDNECTRNCGTPCRHPEKVRPSLEAFGFDIAKTLSELFNIELLWG KDGKLPEYLVLVSGFFHNEYELCNIAY
Specific function: Unknown
COG id: COG5423
COG function: function code S; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21930; Mature: 21799
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYTVENFTSDITVEGYIAEFRDELHFLELCKQCTNYGKSWGCPPFDFDTESFLRQYKY CCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AHLMATKIIPEDKDIPIEYTQKLILPERIRIESELLDMERKYGGRSFAYIGKCLHCSDNE HHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC CTRNCGTPCRHPEKVRPSLEAFGFDIAKTLSELFNIELLWGKDGKLPEYLVLVSGFFHNE HHHHCCCCCCCCHHHCCHHHHHCHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHCCC YELCNIAY CCEEEECC >Mature Secondary Structure SIYTVENFTSDITVEGYIAEFRDELHFLELCKQCTNYGKSWGCPPFDFDTESFLRQYKY CEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AHLMATKIIPEDKDIPIEYTQKLILPERIRIESELLDMERKYGGRSFAYIGKCLHCSDNE HHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC CTRNCGTPCRHPEKVRPSLEAFGFDIAKTLSELFNIELLWGKDGKLPEYLVLVSGFFHNE HHHHCCCCCCCCHHHCCHHHHHCHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHCCC YELCNIAY CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA