| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347357
Identifier: 29347357
GI number: 29347357
Start: 2447183
End: 2447599
Strand: Reverse
Name: 29347357
Synonym: BT_1947
Alternate gene names: NA
Gene position: 2447599-2447183 (Counterclockwise)
Preceding gene: 29347359
Following gene: 29347356
Centisome position: 39.1
GC content: 58.51
Gene sequence:
>417_bases ATGGATTCAGAAAAGGAAAAGAACCGGCTTTCCGATATCGTTCTCGAGAGGGTCGGACTCACGGGGAACCTTCTGTCAGC TCCCGTTTCCCCATCCCTGGAACCAGTGGTGGAGATACCAAGTCATGGAAGTCAGGTCCGGGCAGGGAAAGTGACAGGTC CGGAGGAATACAAGAGGAGGTTTCTGGTTCCCGCTCCCAGAGCCGCTGAGTGGAAGACCGCCTACATTGATGGGAGACTG CACCGCCGGATCGCCATGCTGGTCAGGGCCGCCGGCTGCGGCAGCATCTCCGGTTTTATCATCCGGTTGTTGGAACTCCA TATGGAGGAACACAGGGAGGACATCGCCTCCCTGCTCGGTGAGGTCTACCGTCCCTGGGATGAGGACGGACAGCCGGGAG GAACACCTCGCCGATAA
Upstream 100 bases:
>100_bases ACTATAAGTGACAGGTGGTTTCATCCTGTTCTCTTCTTCCTTTATTTTGTATTCCGAGACAATACCAGTTGTGTAATTTA ATAATTTAAGATTTTAAAAT
Downstream 100 bases:
>100_bases AACGTTGTCATTGTCCAAGAAGGCATATCATGACAGGAAAGAACGTAAAAGAGCGGATTGGTCTTGGCGGGATGGACGCG GACCGCATCCGTGAGATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MDSEKEKNRLSDIVLERVGLTGNLLSAPVSPSLEPVVEIPSHGSQVRAGKVTGPEEYKRRFLVPAPRAAEWKTAYIDGRL HRRIAMLVRAAGCGSISGFIIRLLELHMEEHREDIASLLGEVYRPWDEDGQPGGTPRR
Sequences:
>Translated_138_residues MDSEKEKNRLSDIVLERVGLTGNLLSAPVSPSLEPVVEIPSHGSQVRAGKVTGPEEYKRRFLVPAPRAAEWKTAYIDGRL HRRIAMLVRAAGCGSISGFIIRLLELHMEEHREDIASLLGEVYRPWDEDGQPGGTPRR >Mature_138_residues MDSEKEKNRLSDIVLERVGLTGNLLSAPVSPSLEPVVEIPSHGSQVRAGKVTGPEEYKRRFLVPAPRAAEWKTAYIDGRL HRRIAMLVRAAGCGSISGFIIRLLELHMEEHREDIASLLGEVYRPWDEDGQPGGTPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15366; Mature: 15366
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSEKEKNRLSDIVLERVGLTGNLLSAPVSPSLEPVVEIPSHGSQVRAGKVTGPEEYKRR CCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHEECCCCCCEECCCCCCCHHHHHHC FLVPAPRAAEWKTAYIDGRLHRRIAMLVRAAGCGSISGFIIRLLELHMEEHREDIASLLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EVYRPWDEDGQPGGTPRR HHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDSEKEKNRLSDIVLERVGLTGNLLSAPVSPSLEPVVEIPSHGSQVRAGKVTGPEEYKRR CCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHEECCCCCCEECCCCCCCHHHHHHC FLVPAPRAAEWKTAYIDGRLHRRIAMLVRAAGCGSISGFIIRLLELHMEEHREDIASLLG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EVYRPWDEDGQPGGTPRR HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA