| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347346
Identifier: 29347346
GI number: 29347346
Start: 2432684
End: 2434831
Strand: Reverse
Name: 29347346
Synonym: BT_1936
Alternate gene names: NA
Gene position: 2434831-2432684 (Counterclockwise)
Preceding gene: 29347347
Following gene: 29347345
Centisome position: 38.89
GC content: 41.81
Gene sequence:
>2148_bases ATGCTCTGCAGCATATTATCTCTGCGGGCACAGACATTTGTTAAACCGGCTGTGAAAGTAAAGGACACCTCTTTTGCTGT AATTACAGATAAAGGGACATTTCAGGCTTGTGAAGCCGAGCTTAAAGCCTATCAGGAGATTCTAGGAATGGAAGGGTTGC CTACGTTCATCGTATACAATGAATGGAATAAACCGGAAGATGTAAAGAAAGTTATTGTTAAGCTCTACAAAAAGGATAAA TTGGAAGGAGTGGTATTTGTCGGTGATATCCCTATTCCAATGCTCCGCAAAGCCCAGCATATGACTTCCGCTTTTAAAAT GGATGAGAAAAACAATGACTGGAGAGATTCTTCAGTGCCCAGCGACCGTTTCTACGATGATTTCGACCTACAATTCGATT TTTTGAAACAGGACAGTGTCGAAAATAATTTCTTCTATTATAATTTGGCTATAAAATCTCCACAGCAAATTCGGTGTGAC ATATATTCTGCACGTGTCAAAGCTGTTGATAACGGCGAAGAACCGCATGCGCAAATCAGCCGCTATTTTAAAAAAGTGGT GGCTGAGCACCAGATAAACAATAAATTAGACCAATTCTTCTCCTATACAGGTGATGGCTCTTACTCTAACTCATTGACTG CATGGACACCGGAAACCTTTACTATTCGCGAACAAATGCCGGGCGTATTCGATAAAGAGGGACGGGCCCGTTTCATCCGT TATAATTTCAGCGATTATCCCAAGGACGATGTCATTAATATGCTGAAACGCACAGATCTGGACTTGTCTATTTTTCATGA GCATGGTATGCCCGAACGTCAATATCTTTCCGGTAGTCCCGCTACTAATAGGTGGAATGCTCATGTAGATGCAATGAAGT ACTATTATCGTGGTTTAGCGCGTAGAAAGCAAAACAACAAAAAGTCTTTCGACGAAATGCTGGATATGATGAAAAACACA TACGGTTTGGACACTACTTGGATTGCAGGCTATGATGATCCCAAAGTAATTGCAGAAGATTCTTTACTAGACCTGCGCAC CGGTATTATCCTGTCGGAAGTTACAGAGTTTAAGCCTAATAGCCGTATGGTAATTTTCGATGCATGCTATAATGGTGATT TCCGGGAAAAAGATTACATTGCCGGACGTTATATCATGTCGGAAGGAAAATGCGTAACTACTTTTGCCAATTCAGTCAAT GTACTGCAAGATAAAATGGCAAACGAGATGCTCGGCCTGTTAGGTATGGGAGCACGAGTGGGGCAATGGGCTAAATTGAC GAATATTCTCGAATCGCACATTACCGGTGACCCTACTCTACGTTTTCAATCTATCAATGAGGTAGATGCCAATGCTTTGT TCAAAGAACCATATAGCGAGTCCCGCATGTTGGAGTTATTACAGTCGCCCTATGCCGACATACAGAATTTTGCTTTGCAC AACCTTTATCGCAATGACTATCCGGGTATTTCTGATTTATTAAGAAAAACTTTTGAAACTTCCTCGTTCATGATGGTACG TTTCACCTGCTTGGCATTGCTTGAGAAGATTAGTGACAAAAACTTCCGGGAAGTCTTACACTTGGCCATTACGGATTCCT ATGAATTTATTCGTCGCACCTCTGTTCGTATGATGCAACATGTGGGACTGAACGAGTATGTTTATCCGCAAATCAAAGCC TATGTAGAAGACAACCTATCCGAGCGTGTGGCATTTAATGTGAGTTTGGGGCTTCAAGTCTTTGATCAGGCAGCCGTACA GGCGGCAATTGATAAAGTAATGGCTGAGACCTATGTGTTGCAAGACAAGGAGGAGATGCGTAAGGTTTTGGAGAATGCCA ATAATAGTCGTAGCATGCAAAAAGAGTTATTAAGCAAAGAAACTTCCGAACGTTGGCGCATCCTTTATTGCAATTCTCTG AAAAATCATATGGCACATGCCTGTGTAGACGGCCTCTTGGCTTTACTTACCGACTCCAGTGAAAGTGAAAAGCTAAAAAC CTGTTTATTGGAGGCTTTTGCTTGGTTCACTCATTCTTATCGGAAGCCTGACATCCTTCGGGTATGCGATCAACTGAGAA AAGATAAGAGCTTATCCGAGAACCTTCGTGAAGAAGCCGACCGTACATATTACAGACTTAAAAATTAA
Upstream 100 bases:
>100_bases TGGGCGTACTCATTTATCGATAAGTTTAGGATGTAATTTTTAATGCTACATAACGAAATCTATATTACAAAACATGCGTA AATTAATAACTGGAAGTTTG
Downstream 100 bases:
>100_bases TTGGCCATGATTAAAAAAATAATATATCTGGCATTTCTTTTGCCATTGGCAGGAAATGCACAAACAACAGTCATAAAGCC ATTGGTCAAACAACCTACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 715; Mature: 715
Protein sequence:
>715_residues MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYNEWNKPEDVKKVIVKLYKKDK LEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVPSDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCD IYSARVKAVDNGEEPHAQISRYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLARRKQNNKKSFDEMLDMMKNT YGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPNSRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVN VLQDKMANEMLGLLGMGARVGQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRTSVRMMQHVGLNEYVYPQIKA YVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVLQDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSL KNHMAHACVDGLLALLTDSSESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN
Sequences:
>Translated_715_residues MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYNEWNKPEDVKKVIVKLYKKDK LEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVPSDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCD IYSARVKAVDNGEEPHAQISRYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLARRKQNNKKSFDEMLDMMKNT YGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPNSRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVN VLQDKMANEMLGLLGMGARVGQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRTSVRMMQHVGLNEYVYPQIKA YVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVLQDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSL KNHMAHACVDGLLALLTDSSESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN >Mature_715_residues MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYNEWNKPEDVKKVIVKLYKKDK LEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVPSDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCD IYSARVKAVDNGEEPHAQISRYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLARRKQNNKKSFDEMLDMMKNT YGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPNSRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVN VLQDKMANEMLGLLGMGARVGQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRTSVRMMQHVGLNEYVYPQIKA YVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVLQDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSL KNHMAHACVDGLLALLTDSSESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82889; Mature: 82889
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYN CCCHHHHHHHHHHHCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE EWNKPEDVKKVIVKLYKKDKLEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVP CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCDIYSARVKAVDNGEEPHAQIS CCCCCCCCCCEEHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHH RYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEHHHCCCCCCCCCCEEEEE YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLA ECCCCCCHHHHHHHHHHCCCCEEEHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RRKQNNKKSFDEMLDMMKNTYGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPN HHHHCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC SRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVNVLQDKMANEMLGLLGMGARV CCEEEEEECCCCCCCCCCHHCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHH GQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH HHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRT HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH SVRMMQHVGLNEYVYPQIKAYVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVL HHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH QDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSLKNHMAHACVDGLLALLTDSS CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCC ESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLCSILSLRAQTFVKPAVKVKDTSFAVITDKGTFQACEAELKAYQEILGMEGLPTFIVYN CCCHHHHHHHHHHHCCCEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE EWNKPEDVKKVIVKLYKKDKLEGVVFVGDIPIPMLRKAQHMTSAFKMDEKNNDWRDSSVP CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SDRFYDDFDLQFDFLKQDSVENNFFYYNLAIKSPQQIRCDIYSARVKAVDNGEEPHAQIS CCCCCCCCCCEEHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHH RYFKKVVAEHQINNKLDQFFSYTGDGSYSNSLTAWTPETFTIREQMPGVFDKEGRARFIR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEHHHCCCCCCCCCCEEEEE YNFSDYPKDDVINMLKRTDLDLSIFHEHGMPERQYLSGSPATNRWNAHVDAMKYYYRGLA ECCCCCCHHHHHHHHHHCCCCEEEHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RRKQNNKKSFDEMLDMMKNTYGLDTTWIAGYDDPKVIAEDSLLDLRTGIILSEVTEFKPN HHHHCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCHHHHHHHHHHHHHHHCCCC SRMVIFDACYNGDFREKDYIAGRYIMSEGKCVTTFANSVNVLQDKMANEMLGLLGMGARV CCEEEEEECCCCCCCCCCHHCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHH GQWAKLTNILESHITGDPTLRFQSINEVDANALFKEPYSESRMLELLQSPYADIQNFALH HHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH NLYRNDYPGISDLLRKTFETSSFMMVRFTCLALLEKISDKNFREVLHLAITDSYEFIRRT HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH SVRMMQHVGLNEYVYPQIKAYVEDNLSERVAFNVSLGLQVFDQAAVQAAIDKVMAETYVL HHHHHHHCCCCCHHHHHHHHHHHCCCHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH QDKEEMRKVLENANNSRSMQKELLSKETSERWRILYCNSLKNHMAHACVDGLLALLTDSS CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCC ESEKLKTCLLEAFAWFTHSYRKPDILRVCDQLRKDKSLSENLREEADRTYYRLKN CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA