Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347347

Identifier: 29347347

GI number: 29347347

Start: 2434889

End: 2436451

Strand: Reverse

Name: 29347347

Synonym: BT_1937

Alternate gene names: NA

Gene position: 2436451-2434889 (Counterclockwise)

Preceding gene: 29347348

Following gene: 29347346

Centisome position: 38.92

GC content: 39.67

Gene sequence:

>1563_bases
ATGAAAAAACAATATATGAACTATATGAAAAGCTGCCTGCTGGTAATGATAGCCTGCCTTGTAAGTATGGTGGGAGCGGC
ACAGGGCTTCTCTCCCGCCGCTATGGAACAATTGAAAACAAGACGACTATGGTCTCATTCACAGAATGCTGCCGGTATGC
CATTCGATGATATTCAGAATTATTCGAATGTTATATTGGGATATGACTTACAGGACGGAAACTATTGCCGTCCGCAAGAG
GGGCAGAAAGAGGCTATCGTAGGTGTATCCAGTGAAGGCTTTATCAATCTGAAAAATGCATATGTGTGGGGAGCATTTAA
TTTTGCACAAAAAAATCTGACAGATGCCGGATATAACGCCTCCATTGCCGATCCATTCAGGGGAATGCCTTACTATGTCG
CAGACCAGCACTTAAGCAAATGGAGAAATCAATATTACGATCTGAAGTTTCGTGCAGCTACTCCTTTACTTGGTAATCAT
TGGGCATTGGGGTTGGAAGGTAATTATGTAGCTACATTAGCTGCCAAACAGCGCGACCCGCGTGTGGATACCCGTTTTTA
TACGCTGGGACTGACGCCGGGGATTACTTACAAGTTGAATAATTCACACAAGTTTGGTGCAAGTTTCAAGTATAGTTCTA
TCAAGGAAGACTCAAGAATGAGTAATGTCAACTCTTATGTGGATCAGGACTATTATATATTATACGGTTTGGGAACAGCC
ATAAAAGGAATAGGCAGCGGTGTAACCAGCAATTATATTGGAGACCGTTTCGGTGGAGCTCTCCAGTACAACTTCAGTAT
GCCCTCTTTCAATTTACTGCTTGAGGGCAGTTACGATGTAAAAGCGGAAACTGTTCAGCAGAGCTATACGACTCCTAAAA
AAATAGCCGGTGTAAAAGATAAAACTGCTCATGTTTCTTTAACGATGATTCAGGAAGGAAAGGACTATACCAATTATATG
AGAACCACATATACAAATCGTAACATCGATGGTATTCAGTATATTTCTCAACGCGATAACTCTGAATCACAAAGTGGCTG
GGTGGAATTATATAATAACATCCGTTCTACGTACAAGGCACAAACCGCTTCTCTTAATTATGCATTAAGCAGAAACCGCG
GGAATGAATATAGTTGGAAAGCAGAATTAAATGTGAATTATACCAAGCAAGACGATGAATATTTAATGCCTAATTCTGTA
CAGAATGCAGAAAATTTATCTTTAGGCTTAGGTGGCAAAAAAAATTTTGTTTTAGGCAATAGTTTGAATCGCAGGCTTTT
AATAGATGTTCATGTTGCGTATAACAATAATCTGGGAGGTGAATATGTATATGGTGGCAGCCATGCAGACTATCCAACTG
TAACCGAATTACAACAAGGGCTGACTAATTATTATACCTGTGATTACTATCGTATTGGCGGGTCGATAACGTATTCGCAA
CAAGTCAGAGAAAACAGACGTATGAACTTATTTGCAAAAGTTGTATTCGATCGTGTAAATACCTCTGACTATGATTATGA
TGGGCGTACTCATTTATCGATAAGTTTAGGATGTAATTTTTAA

Upstream 100 bases:

>100_bases
ATGACTTTGAACGTGGCGTTGTTCCTGTAATGCGTCGTAATGGAGCAAAAATGCCTTCATGGAATCACACATTGTAATAA
TTAACTAAAAAGACAGAACA

Downstream 100 bases:

>100_bases
TGCTACATAACGAAATCTATATTACAAAACATGCGTAAATTAATAACTGGAAGTTTGATGCTCTGCAGCATATTATCTCT
GCGGGCACAGACATTTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQNYSNVILGYDLQDGNYCRPQE
GQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNASIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNH
WALGLEGNYVATLAAKQRDPRVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA
IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKDKTAHVSLTMIQEGKDYTNYM
RTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKAQTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSV
QNAENLSLGLGGKKNFVLGNSLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ
QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF

Sequences:

>Translated_520_residues
MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQNYSNVILGYDLQDGNYCRPQE
GQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNASIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNH
WALGLEGNYVATLAAKQRDPRVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA
IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKDKTAHVSLTMIQEGKDYTNYM
RTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKAQTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSV
QNAENLSLGLGGKKNFVLGNSLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ
QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF
>Mature_520_residues
MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQNYSNVILGYDLQDGNYCRPQE
GQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNASIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNH
WALGLEGNYVATLAAKQRDPRVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA
IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKDKTAHVSLTMIQEGKDYTNYM
RTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKAQTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSV
QNAENLSLGLGGKKNFVLGNSLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ
QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58782; Mature: 58782

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHC
YSNVILGYDLQDGNYCRPQEGQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNA
CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCEEEEEEEHHHHHCCCCCCCCC
SIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNHWALGLEGNYVATLAAKQRDP
CCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCC
RVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA
CCCEEEEEEECCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCHH
IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKD
HHHHCCCCHHCCCHHHCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCHHHHCCCCC
KTAHVSLTMIQEGKDYTNYMRTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKA
CCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSVQNAENLSLGLGGKKNFVLGN
HHEEEEEEEECCCCCCEEEEEEEEEEEECCCCCEECCCCCCCCCCCEEECCCCCCEEECC
SLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ
CCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEEEECCEEEEHH
QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF
HHHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHC
YSNVILGYDLQDGNYCRPQEGQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNA
CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCEEEEEEEHHHHHCCCCCCCCC
SIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNHWALGLEGNYVATLAAKQRDP
CCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCC
RVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA
CCCEEEEEEECCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCHH
IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKD
HHHHCCCCHHCCCHHHCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCHHHHCCCCC
KTAHVSLTMIQEGKDYTNYMRTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKA
CCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSVQNAENLSLGLGGKKNFVLGN
HHEEEEEEEECCCCCCEEEEEEEEEEEECCCCCEECCCCCCCCCCCEEECCCCCCEEECC
SLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ
CCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEEEECCEEEEHH
QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF
HHHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA