| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347347
Identifier: 29347347
GI number: 29347347
Start: 2434889
End: 2436451
Strand: Reverse
Name: 29347347
Synonym: BT_1937
Alternate gene names: NA
Gene position: 2436451-2434889 (Counterclockwise)
Preceding gene: 29347348
Following gene: 29347346
Centisome position: 38.92
GC content: 39.67
Gene sequence:
>1563_bases ATGAAAAAACAATATATGAACTATATGAAAAGCTGCCTGCTGGTAATGATAGCCTGCCTTGTAAGTATGGTGGGAGCGGC ACAGGGCTTCTCTCCCGCCGCTATGGAACAATTGAAAACAAGACGACTATGGTCTCATTCACAGAATGCTGCCGGTATGC CATTCGATGATATTCAGAATTATTCGAATGTTATATTGGGATATGACTTACAGGACGGAAACTATTGCCGTCCGCAAGAG GGGCAGAAAGAGGCTATCGTAGGTGTATCCAGTGAAGGCTTTATCAATCTGAAAAATGCATATGTGTGGGGAGCATTTAA TTTTGCACAAAAAAATCTGACAGATGCCGGATATAACGCCTCCATTGCCGATCCATTCAGGGGAATGCCTTACTATGTCG CAGACCAGCACTTAAGCAAATGGAGAAATCAATATTACGATCTGAAGTTTCGTGCAGCTACTCCTTTACTTGGTAATCAT TGGGCATTGGGGTTGGAAGGTAATTATGTAGCTACATTAGCTGCCAAACAGCGCGACCCGCGTGTGGATACCCGTTTTTA TACGCTGGGACTGACGCCGGGGATTACTTACAAGTTGAATAATTCACACAAGTTTGGTGCAAGTTTCAAGTATAGTTCTA TCAAGGAAGACTCAAGAATGAGTAATGTCAACTCTTATGTGGATCAGGACTATTATATATTATACGGTTTGGGAACAGCC ATAAAAGGAATAGGCAGCGGTGTAACCAGCAATTATATTGGAGACCGTTTCGGTGGAGCTCTCCAGTACAACTTCAGTAT GCCCTCTTTCAATTTACTGCTTGAGGGCAGTTACGATGTAAAAGCGGAAACTGTTCAGCAGAGCTATACGACTCCTAAAA AAATAGCCGGTGTAAAAGATAAAACTGCTCATGTTTCTTTAACGATGATTCAGGAAGGAAAGGACTATACCAATTATATG AGAACCACATATACAAATCGTAACATCGATGGTATTCAGTATATTTCTCAACGCGATAACTCTGAATCACAAAGTGGCTG GGTGGAATTATATAATAACATCCGTTCTACGTACAAGGCACAAACCGCTTCTCTTAATTATGCATTAAGCAGAAACCGCG GGAATGAATATAGTTGGAAAGCAGAATTAAATGTGAATTATACCAAGCAAGACGATGAATATTTAATGCCTAATTCTGTA CAGAATGCAGAAAATTTATCTTTAGGCTTAGGTGGCAAAAAAAATTTTGTTTTAGGCAATAGTTTGAATCGCAGGCTTTT AATAGATGTTCATGTTGCGTATAACAATAATCTGGGAGGTGAATATGTATATGGTGGCAGCCATGCAGACTATCCAACTG TAACCGAATTACAACAAGGGCTGACTAATTATTATACCTGTGATTACTATCGTATTGGCGGGTCGATAACGTATTCGCAA CAAGTCAGAGAAAACAGACGTATGAACTTATTTGCAAAAGTTGTATTCGATCGTGTAAATACCTCTGACTATGATTATGA TGGGCGTACTCATTTATCGATAAGTTTAGGATGTAATTTTTAA
Upstream 100 bases:
>100_bases ATGACTTTGAACGTGGCGTTGTTCCTGTAATGCGTCGTAATGGAGCAAAAATGCCTTCATGGAATCACACATTGTAATAA TTAACTAAAAAGACAGAACA
Downstream 100 bases:
>100_bases TGCTACATAACGAAATCTATATTACAAAACATGCGTAAATTAATAACTGGAAGTTTGATGCTCTGCAGCATATTATCTCT GCGGGCACAGACATTTGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQNYSNVILGYDLQDGNYCRPQE GQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNASIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNH WALGLEGNYVATLAAKQRDPRVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKDKTAHVSLTMIQEGKDYTNYM RTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKAQTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSV QNAENLSLGLGGKKNFVLGNSLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF
Sequences:
>Translated_520_residues MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQNYSNVILGYDLQDGNYCRPQE GQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNASIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNH WALGLEGNYVATLAAKQRDPRVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKDKTAHVSLTMIQEGKDYTNYM RTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKAQTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSV QNAENLSLGLGGKKNFVLGNSLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF >Mature_520_residues MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQNYSNVILGYDLQDGNYCRPQE GQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNASIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNH WALGLEGNYVATLAAKQRDPRVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKDKTAHVSLTMIQEGKDYTNYM RTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKAQTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSV QNAENLSLGLGGKKNFVLGNSLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58782; Mature: 58782
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHC YSNVILGYDLQDGNYCRPQEGQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNA CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCEEEEEEEHHHHHCCCCCCCCC SIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNHWALGLEGNYVATLAAKQRDP CCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCC RVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA CCCEEEEEEECCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCHH IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKD HHHHCCCCHHCCCHHHCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCHHHHCCCCC KTAHVSLTMIQEGKDYTNYMRTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKA CCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH QTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSVQNAENLSLGLGGKKNFVLGN HHEEEEEEEECCCCCCEEEEEEEEEEEECCCCCEECCCCCCCCCCCEEECCCCCCEEECC SLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ CCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEEEECCEEEEHH QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF HHHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MKKQYMNYMKSCLLVMIACLVSMVGAAQGFSPAAMEQLKTRRLWSHSQNAAGMPFDDIQN CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHC YSNVILGYDLQDGNYCRPQEGQKEAIVGVSSEGFINLKNAYVWGAFNFAQKNLTDAGYNA CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCEEEEEEEHHHHHCCCCCCCCC SIADPFRGMPYYVADQHLSKWRNQYYDLKFRAATPLLGNHWALGLEGNYVATLAAKQRDP CCCCCCCCCCCEEHHHHHHHHHHHHEEEEEEECCCCCCCCEEEEECCCEEEEEEECCCCC RVDTRFYTLGLTPGITYKLNNSHKFGASFKYSSIKEDSRMSNVNSYVDQDYYILYGLGTA CCCEEEEEEECCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCEEEEECCHH IKGIGSGVTSNYIGDRFGGALQYNFSMPSFNLLLEGSYDVKAETVQQSYTTPKKIAGVKD HHHHCCCCHHCCCHHHCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCHHHHCCCCC KTAHVSLTMIQEGKDYTNYMRTTYTNRNIDGIQYISQRDNSESQSGWVELYNNIRSTYKA CCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH QTASLNYALSRNRGNEYSWKAELNVNYTKQDDEYLMPNSVQNAENLSLGLGGKKNFVLGN HHEEEEEEEECCCCCCEEEEEEEEEEEECCCCCEECCCCCCCCCCCEEECCCCCCEEECC SLNRRLLIDVHVAYNNNLGGEYVYGGSHADYPTVTELQQGLTNYYTCDYYRIGGSITYSQ CCCCEEEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEEEECCEEEEHH QVRENRRMNLFAKVVFDRVNTSDYDYDGRTHLSISLGCNF HHHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA