| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is trxA [C]
Identifier: 29347324
GI number: 29347324
Start: 2403142
End: 2403465
Strand: Reverse
Name: trxA [C]
Synonym: BT_1914
Alternate gene names: 29347324
Gene position: 2403465-2403142 (Counterclockwise)
Preceding gene: 29347329
Following gene: 29347322
Centisome position: 38.39
GC content: 43.83
Gene sequence:
>324_bases ATGAAAGAAAAGAAAATAGCTCGTGATACGAGAAACAGAGAGAAACTGGCGGGTGATGACTGGGTAATGGCAGAATTTTA TGCAACGTGGTGTCCTCACTGCCAGCGTATGCAGCCTTTGATAAAAGAGTTCAAGAAAGAGATGGAAGGGATAGTCGAGG TAGTACAGGTAGACGTAGACGAGGAAAGTGATCTCGCTAATTTCTATACCATTGAATCCACTCCCACATTCATTCTTTTC AGAAAAGGTGAACAGCTCTGGAGACAATCCGGCGAACTGACGCTGGAAAGATTGGGAAGAGCAGTCAAGGAGTTTAAATC TTGA
Upstream 100 bases:
>100_bases TCCAATAGAACTAAATCTCTGTGTATTAATGTTTATGTGTTAAACCTTCCCCTTTTTGTATTGTTAAGACTCCCACTAAT TAATTAAAAGGAGAATCGAT
Downstream 100 bases:
>100_bases AAAAGTATTAATAAAAAGGGATGTTTTTCTATGAAAGTTTTAAATCGTGTTATAAAACATACTTTTTTATTTGGATAATT TGCTAATAACACAGAAGTAC
Product: thioredoxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MKEKKIARDTRNREKLAGDDWVMAEFYATWCPHCQRMQPLIKEFKKEMEGIVEVVQVDVDEESDLANFYTIESTPTFILF RKGEQLWRQSGELTLERLGRAVKEFKS
Sequences:
>Translated_107_residues MKEKKIARDTRNREKLAGDDWVMAEFYATWCPHCQRMQPLIKEFKKEMEGIVEVVQVDVDEESDLANFYTIESTPTFILF RKGEQLWRQSGELTLERLGRAVKEFKS >Mature_107_residues MKEKKIARDTRNREKLAGDDWVMAEFYATWCPHCQRMQPLIKEFKKEMEGIVEVVQVDVDEESDLANFYTIESTPTFILF RKGEQLWRQSGELTLERLGRAVKEFKS
Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 12676; Mature: 12676
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKKIARDTRNREKLAGDDWVMAEFYATWCPHCQRMQPLIKEFKKEMEGIVEVVQVDVD CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC EESDLANFYTIESTPTFILFRKGEQLWRQSGELTLERLGRAVKEFKS CCCCCCCEEEECCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKEKKIARDTRNREKLAGDDWVMAEFYATWCPHCQRMQPLIKEFKKEMEGIVEVVQVDVD CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC EESDLANFYTIESTPTFILFRKGEQLWRQSGELTLERLGRAVKEFKS CCCCCCCEEEECCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]