| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is yeiH [C]
Identifier: 29347329
GI number: 29347329
Start: 2409425
End: 2410435
Strand: Reverse
Name: yeiH [C]
Synonym: BT_1919
Alternate gene names: 29347329
Gene position: 2410435-2409425 (Counterclockwise)
Preceding gene: 29347331
Following gene: 29347324
Centisome position: 38.5
GC content: 45.7
Gene sequence:
>1011_bases ATGCTGCACGGTGTCCTGTTGATAGCATTATTTTCTTGTGCTGCGTTTTATATTGGCGAGATGTCTTTTGTAAGAAGTAT TTCTTTCAGTCCGATGATTGTCGGTATCATTTTGGGTATGCTTTATGCCAATAGTCTGCGAAATCACCTTCCGGAAACGT GGGTGCCGGGTATCCAGTTTTGCTCGAAGAAGATTCTGCGTATCGGTATCATTTTATATGGCTTCAGATTGACTTTTCAG GATGTGATGGCTATCGGGTTGCCGGCTATGCTGATCGATGTGATTATTGTGGCGGTGACTATTTGTGGCGGTATCTATCT TGGTAAATTGCTGAAGATGGACCGTGGAATCGCATTACTTACTTCCATCGGAAGTGGAATTTGTGGAGCCGCCGCCATTC TGGGGGCTGAATCGACCATCAAGGCAAAGCCATATAAAACGGCTGTATCCGTGTCTACTGTCGTGATTTTCGGTACTATT TCCATGTTTCTGTATCCTTTCTTGTACCGGAACGGATTTTGTGCACTGACTCCCGATCAGATGGGAATTTATACGGGGGC TACCCTGCATGAGGTTGCCCATGTAGTAGGTGCCGGAGACGCGATGGGAAACGGTATTTCGGATTCTGCCATCATAGTGA AAATGATTCGTGTGATGATGTTGGTTCCTGTGCTTCTGATTACTACCTATCTGGTGGCGAGAGCGCGGAAAAGACAAGTG CAGAAAGGGCAGAAGTTTCAGAAGATTGCAGTGCCCTGGTTTGCAATAGGTTTTATGGGTGTCATCGCTTTCAATTCTTT TGATTTGCTTCCTGCGCAGTTGGTGGCAGGTATTAACACACTGGATACCTTTCTGCTGACAATGGCTATGACGGCACTCG GAACAGAAACAAGCATCGATAAATTCAGAAAGGCCGGAGCCAAACCTTTCGTACTGGCTCTTTTACTTTATGTGTGGCTG GTGGTCGGAGGATATTTCCTTGTGAAGTATCTCACTCCTTATCTGATGTAA
Upstream 100 bases:
>100_bases CTGTGATTCAGTCTGCCGGAAAATGTCTTCCTTTGCAAAAAAGAAATAATTTAGTATCACTTAAATCAAATCATTTATGT TCAATGAAAAGAGAAGCAGC
Downstream 100 bases:
>100_bases GGGAAAAACGTCTTCTTGCAAAATACTTATTATCACTTTCACCGCAAATTGTACAATCTTAGACGGATAAATTAAGTGTC AGTCATTGAGAACTTCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MLHGVLLIALFSCAAFYIGEMSFVRSISFSPMIVGIILGMLYANSLRNHLPETWVPGIQFCSKKILRIGIILYGFRLTFQ DVMAIGLPAMLIDVIIVAVTICGGIYLGKLLKMDRGIALLTSIGSGICGAAAILGAESTIKAKPYKTAVSVSTVVIFGTI SMFLYPFLYRNGFCALTPDQMGIYTGATLHEVAHVVGAGDAMGNGISDSAIIVKMIRVMMLVPVLLITTYLVARARKRQV QKGQKFQKIAVPWFAIGFMGVIAFNSFDLLPAQLVAGINTLDTFLLTMAMTALGTETSIDKFRKAGAKPFVLALLLYVWL VVGGYFLVKYLTPYLM
Sequences:
>Translated_336_residues MLHGVLLIALFSCAAFYIGEMSFVRSISFSPMIVGIILGMLYANSLRNHLPETWVPGIQFCSKKILRIGIILYGFRLTFQ DVMAIGLPAMLIDVIIVAVTICGGIYLGKLLKMDRGIALLTSIGSGICGAAAILGAESTIKAKPYKTAVSVSTVVIFGTI SMFLYPFLYRNGFCALTPDQMGIYTGATLHEVAHVVGAGDAMGNGISDSAIIVKMIRVMMLVPVLLITTYLVARARKRQV QKGQKFQKIAVPWFAIGFMGVIAFNSFDLLPAQLVAGINTLDTFLLTMAMTALGTETSIDKFRKAGAKPFVLALLLYVWL VVGGYFLVKYLTPYLM >Mature_336_residues MLHGVLLIALFSCAAFYIGEMSFVRSISFSPMIVGIILGMLYANSLRNHLPETWVPGIQFCSKKILRIGIILYGFRLTFQ DVMAIGLPAMLIDVIIVAVTICGGIYLGKLLKMDRGIALLTSIGSGICGAAAILGAESTIKAKPYKTAVSVSTVVIFGTI SMFLYPFLYRNGFCALTPDQMGIYTGATLHEVAHVVGAGDAMGNGISDSAIIVKMIRVMMLVPVLLITTYLVARARKRQV QKGQKFQKIAVPWFAIGFMGVIAFNSFDLLPAQLVAGINTLDTFLLTMAMTALGTETSIDKFRKAGAKPFVLALLLYVWL VVGGYFLVKYLTPYLM
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family
Homologues:
Organism=Escherichia coli, GI1788482, Length=322, Percent_Identity=43.4782608695652, Blast_Score=247, Evalue=7e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1919_BACTN (Q8A6G5)
Other databases:
- EMBL: AE015928 - RefSeq: NP_810832.1 - GeneID: 1076191 - GenomeReviews: AE015928_GR - KEGG: bth:BT_1919 - NMPDR: fig|226186.1.peg.1919 - HOGENOM: HBG669767 - OMA: VAIVAIM - PhylomeDB: Q8A6G5 - ProtClustDB: CLSK822938 - BioCyc: BTHE226186:BT_1919-MONOMER - InterPro: IPR004630 - InterPro: IPR018383 - TIGRFAMs: TIGR00698
Pfam domain/function: PF03601 Cons_hypoth698
EC number: NA
Molecular weight: Translated: 36453; Mature: 36453
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xb4315e8)-; HASH(0xfbaae7c)-; HASH(0xfe0f388)-; HASH(0xfe19ec4)-; HASH(0xfda3608)-; HASH(0xf41bed8)-; HASH(0xfda9840)-; HASH(0xefeb520)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHGVLLIALFSCAAFYIGEMSFVRSISFSPMIVGIILGMLYANSLRNHLPETWVPGIQF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH CSKKILRIGIILYGFRLTFQDVMAIGLPAMLIDVIIVAVTICGGIYLGKLLKMDRGIALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TSIGSGICGAAAILGAESTIKAKPYKTAVSVSTVVIFGTISMFLYPFLYRNGFCALTPDQ HHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCH MGIYTGATLHEVAHVVGAGDAMGNGISDSAIIVKMIRVMMLVPVLLITTYLVARARKRQV HCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKGQKFQKIAVPWFAIGFMGVIAFNSFDLLPAQLVAGINTLDTFLLTMAMTALGTETSID HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KFRKAGAKPFVLALLLYVWLVVGGYFLVKYLTPYLM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure MLHGVLLIALFSCAAFYIGEMSFVRSISFSPMIVGIILGMLYANSLRNHLPETWVPGIQF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH CSKKILRIGIILYGFRLTFQDVMAIGLPAMLIDVIIVAVTICGGIYLGKLLKMDRGIALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TSIGSGICGAAAILGAESTIKAKPYKTAVSVSTVVIFGTISMFLYPFLYRNGFCALTPDQ HHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCH MGIYTGATLHEVAHVVGAGDAMGNGISDSAIIVKMIRVMMLVPVLLITTYLVARARKRQV HCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKGQKFQKIAVPWFAIGFMGVIAFNSFDLLPAQLVAGINTLDTFLLTMAMTALGTETSID HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KFRKAGAKPFVLALLLYVWLVVGGYFLVKYLTPYLM HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12663928