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The map label for this gene is ybfL [H]

Identifier: 29347303

GI number: 29347303

Start: 2380887

End: 2382080

Strand: Reverse

Name: ybfL [H]

Synonym: BT_1893

Alternate gene names: 29347303

Gene position: 2382080-2380887 (Counterclockwise)

Preceding gene: 29347309

Following gene: 29347299

Centisome position: 38.05

GC content: 36.01

Gene sequence:

>1194_bases
ATGAAGCAAGAAACTAAAAGAAGGATTGAGATCAGCAACCTACATGAATTTGCTGATTCATTAATATTGATAGATAACCG
GATAGAGCGTTGTAAAAAGCATCAGGCCAGTACCATTGTTCTTATTGCCATTTCTGCTGTTATATGTGGCGCTGATACTT
GGAATTCAATAGAAGACTTTGGTAAAAGTAAAGAATCTTTTTTTGCAGCCAAGCTTTCCAATTTTAATGGCATCCCTTCT
CATGATACATTTAATCGCTTTTTCTCGGCATTAGATCCTTTAAAATTTGAAGAATCTTATAGACAATGGGTCCAAAGCAT
TCTCAAATGTTATTCGGGTCATATAGCCATTGATGGTAAAACCATACGAGGAGCCTATGAATCCGAAGAGGACAAGCGTC
GTCGTAAACAAGGAGTACTTCCTGATTCGAATACGGGAAAATACAAATTGCATGTTATTAGTGCATTTGCAACAGAACTG
GGAATCTCCCTTGGACAGTTATGCACACAAGAAAAGGAAAATGAGATAGTTGTCATTCCTGAATTATTAGATATGTTGTG
TATAAAAGATTGTATTATTACAATTGACGCTTTAGGATGCCAGCGTACAATTGCAGAGAAAGTCATAAAGGGAGAAGGTG
ACTACATTTTTATAGTGAAAGATAATCAACCGAAATTAAAGGAAACAGTACTGTCAGCAACAGAAAGTATTGTATCAAAA
GGTACAACAGTACGATTTGACAAATATGAGACGCATGAGGAAGGACATGGCAGGAATGAGTCGAGAATCTGCTATTGCTG
CAACGATCCCGGTTTTCTGGGAGCAGATATTAGAAAGAAGTGGAAAAATATACGGTCTTTTGGATATATTGAGAATACCA
GAAATACAAACAAAGGCACTACAGTGGAAAAAAGATGTTTTATATCTTCCTTGGAACCTGATGCGCAGAAGATACTTAAA
AATAGTAGAGAACACTGGGAAATTGAGAATAATCTACATTGGCAGTTGGATGTCAATTTCCATGAAGACAATACCAGAAG
AAGAAATATATCAGCATTAAACTTCTCCGTACTGGCGAAAATTGCATTGGCCACATTGAGAAACAACAAAAGAGAGATAC
CAATCAATAGAAAAAGATTAATAGCAGGGTGGGATAATGAATTCTTATGGGAACTTATTTTACATGATTTATAA

Upstream 100 bases:

>100_bases
TCTTACATGAATATCGGCTTTTCATCTTATTAATAAGATATTTATCTTTCATTTACAATATTATTTAAGTACATTTACGT
GATTATAAATCACAATTAAA

Downstream 100 bases:

>100_bases
TGCGTTTTCCCTGCGGTTAGATAATACACAAACTTTTGTACTTCCCTAATAATGGTTGACTTGTTTATCTCTAATAGCTG
CTATGTGTTGACTAGAAATA

Product: putative receptor

Products: NA

Alternate protein names: H repeat-associated protein in rhsC-phrB intergenic region; ORF-H2 [H]

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKQETKRRIEISNLHEFADSLILIDNRIERCKKHQASTIVLIAISAVICGADTWNSIEDFGKSKESFFAAKLSNFNGIPS
HDTFNRFFSALDPLKFEESYRQWVQSILKCYSGHIAIDGKTIRGAYESEEDKRRRKQGVLPDSNTGKYKLHVISAFATEL
GISLGQLCTQEKENEIVVIPELLDMLCIKDCIITIDALGCQRTIAEKVIKGEGDYIFIVKDNQPKLKETVLSATESIVSK
GTTVRFDKYETHEEGHGRNESRICYCCNDPGFLGADIRKKWKNIRSFGYIENTRNTNKGTTVEKRCFISSLEPDAQKILK
NSREHWEIENNLHWQLDVNFHEDNTRRRNISALNFSVLAKIALATLRNNKREIPINRKRLIAGWDNEFLWELILHDL

Sequences:

>Translated_397_residues
MKQETKRRIEISNLHEFADSLILIDNRIERCKKHQASTIVLIAISAVICGADTWNSIEDFGKSKESFFAAKLSNFNGIPS
HDTFNRFFSALDPLKFEESYRQWVQSILKCYSGHIAIDGKTIRGAYESEEDKRRRKQGVLPDSNTGKYKLHVISAFATEL
GISLGQLCTQEKENEIVVIPELLDMLCIKDCIITIDALGCQRTIAEKVIKGEGDYIFIVKDNQPKLKETVLSATESIVSK
GTTVRFDKYETHEEGHGRNESRICYCCNDPGFLGADIRKKWKNIRSFGYIENTRNTNKGTTVEKRCFISSLEPDAQKILK
NSREHWEIENNLHWQLDVNFHEDNTRRRNISALNFSVLAKIALATLRNNKREIPINRKRLIAGWDNEFLWELILHDL
>Mature_397_residues
MKQETKRRIEISNLHEFADSLILIDNRIERCKKHQASTIVLIAISAVICGADTWNSIEDFGKSKESFFAAKLSNFNGIPS
HDTFNRFFSALDPLKFEESYRQWVQSILKCYSGHIAIDGKTIRGAYESEEDKRRRKQGVLPDSNTGKYKLHVISAFATEL
GISLGQLCTQEKENEIVVIPELLDMLCIKDCIITIDALGCQRTIAEKVIKGEGDYIFIVKDNQPKLKETVLSATESIVSK
GTTVRFDKYETHEEGHGRNESRICYCCNDPGFLGADIRKKWKNIRSFGYIENTRNTNKGTTVEKRCFISSLEPDAQKILK
NSREHWEIENNLHWQLDVNFHEDNTRRRNISALNFSVLAKIALATLRNNKREIPINRKRLIAGWDNEFLWELILHDL

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1787733, Length=382, Percent_Identity=37.9581151832461, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI1789896, Length=371, Percent_Identity=38.0053908355795, Blast_Score=214, Evalue=5e-57,
Organism=Escherichia coli, GI1786924, Length=253, Percent_Identity=41.1067193675889, Blast_Score=165, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 45645; Mature: 45645

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQETKRRIEISNLHEFADSLILIDNRIERCKKHQASTIVLIAISAVICGADTWNSIEDF
CCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCHHHHHH
GKSKESFFAAKLSNFNGIPSHDTFNRFFSALDPLKFEESYRQWVQSILKCYSGHIAIDGK
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCC
TIRGAYESEEDKRRRKQGVLPDSNTGKYKLHVISAFATELGISLGQLCTQEKENEIVVIP
EECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEH
ELLDMLCIKDCIITIDALGCQRTIAEKVIKGEGDYIFIVKDNQPKLKETVLSATESIVSK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
GTTVRFDKYETHEEGHGRNESRICYCCNDPGFLGADIRKKWKNIRSFGYIENTRNTNKGT
CCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCC
TVEKRCFISSLEPDAQKILKNSREHWEIENNLHWQLDVNFHEDNTRRRNISALNFSVLAK
CHHHHHHHHCCCHHHHHHHHCCCCCEEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH
IALATLRNNKREIPINRKRLIAGWDNEFLWELILHDL
HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCC
>Mature Secondary Structure
MKQETKRRIEISNLHEFADSLILIDNRIERCKKHQASTIVLIAISAVICGADTWNSIEDF
CCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCHHHHHH
GKSKESFFAAKLSNFNGIPSHDTFNRFFSALDPLKFEESYRQWVQSILKCYSGHIAIDGK
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCC
TIRGAYESEEDKRRRKQGVLPDSNTGKYKLHVISAFATELGISLGQLCTQEKENEIVVIP
EECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEH
ELLDMLCIKDCIITIDALGCQRTIAEKVIKGEGDYIFIVKDNQPKLKETVLSATESIVSK
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
GTTVRFDKYETHEEGHGRNESRICYCCNDPGFLGADIRKKWKNIRSFGYIENTRNTNKGT
CCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCC
TVEKRCFISSLEPDAQKILKNSREHWEIENNLHWQLDVNFHEDNTRRRNISALNFSVLAK
CHHHHHHHHCCCHHHHHHHHCCCCCEEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHH
IALATLRNNKREIPINRKRLIAGWDNEFLWELILHDL
HHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503 [H]