Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347299

Identifier: 29347299

GI number: 29347299

Start: 2376377

End: 2376961

Strand: Reverse

Name: 29347299

Synonym: BT_1889

Alternate gene names: NA

Gene position: 2376961-2376377 (Counterclockwise)

Preceding gene: 29347303

Following gene: 29347297

Centisome position: 37.97

GC content: 43.59

Gene sequence:

>585_bases
ATGGATATCCTTGATGTTGCAAGACGAAATCAGCAGAAAGCATGGGAAATAATAGAGAAAGTCAATGTTATCCCGATATG
GGAAAGTATTGGTGCACAGGTTAATCTGGTTGGTTCTCTTCGTATGGGGTTGCTGATGAAACACCGGGATATTGATTTTC
ATATATATACGTCTTCTTTAAGTTTAGCCGATAGTTTCAGGGCGATGGCGAAGCTGGCGGAAAACACGTCAGTGAAGAAG
ATAGAGTGCGTGAATCTGCTGCATACTGTTGAGGCGTGTGTTGAATGGCATGCCTGGTATCAGGATTCGGATAATGCACT
CTGGCAAATTGATATGATACATATCCGGAAAGGTTCCCGATACGATGGGTATTTTGAGAAAGTAGCCGAACGTATTTCTT
CCGTCTTGACAGATGAGATTAAGCGGACAATTCTTCAATTGAAAAATGAGACACCCGAAAGTGAAAAGATTATGGGGGTA
GAATATTATCAGGCTGTCATACGGGATGGAGTGCGGACTTATGCCGGGTTTGAAGAATGGCGAAAAGAGCATCCGGTGGG
AGGAGTGCTGGAATGGATGCCTTAA

Upstream 100 bases:

>100_bases
GGCAAAGTTAGCTAGATCCGGTGGGGTATTAAATAGTTATTTATAGCTATATATCAAGCCTTTTTCTTATTTTTGCGTGC
TCATTTAATCTAGAAGAAAG

Downstream 100 bases:

>100_bases
TCAGCTTAATATCCCCGTCTCATATCCTATTCGGATGGCTTCAATGGAATTTTGTACTCCTAATTTCCGTAATAGATTCT
GTCGGTGAATATTGACGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSLSLADSFRAMAKLAENTSVKK
IECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSRYDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGV
EYYQAVIRDGVRTYAGFEEWRKEHPVGGVLEWMP

Sequences:

>Translated_194_residues
MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSLSLADSFRAMAKLAENTSVKK
IECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSRYDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGV
EYYQAVIRDGVRTYAGFEEWRKEHPVGGVLEWMP
>Mature_194_residues
MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSLSLADSFRAMAKLAENTSVKK
IECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSRYDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGV
EYYQAVIRDGVRTYAGFEEWRKEHPVGGVLEWMP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22541; Mature: 22541

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSL
CCHHHHHHCCHHHHHHHHHHCCCEEEHHHCCCEEEEHHHHHHHHHHHCCCCEEEEEECCH
SLADSFRAMAKLAENTSVKKIECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC
YDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGVEYYQAVIRDGVRTYAGFEEW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH
RKEHPVGGVLEWMP
HHHCCCCCCCCCCC
>Mature Secondary Structure
MDILDVARRNQQKAWEIIEKVNVIPIWESIGAQVNLVGSLRMGLLMKHRDIDFHIYTSSL
CCHHHHHHCCHHHHHHHHHHCCCEEEHHHCCCEEEEHHHHHHHHHHHCCCCEEEEEECCH
SLADSFRAMAKLAENTSVKKIECVNLLHTVEACVEWHAWYQDSDNALWQIDMIHIRKGSR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC
YDGYFEKVAERISSVLTDEIKRTILQLKNETPESEKIMGVEYYQAVIRDGVRTYAGFEEW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH
RKEHPVGGVLEWMP
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA