| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347281
Identifier: 29347281
GI number: 29347281
Start: 2349872
End: 2351860
Strand: Reverse
Name: 29347281
Synonym: BT_1871
Alternate gene names: NA
Gene position: 2351860-2349872 (Counterclockwise)
Preceding gene: 29347282
Following gene: 29347278
Centisome position: 37.57
GC content: 44.9
Gene sequence:
>1989_bases ATGAAAAAACTTACATTTTTATTATTATGTGTCTTGTGTACGCTTTCGTTGCAAGCTCAGAAGCAATTTACACTAGCCTC ACCTGATGGAAATCTGAAAACGACAATAACCATTGGCGACCGGCTGACTTATGACATTACATGCAACGGCAGGCAGATTC TGACTCCTTCTCCCATATCAATGACGTTGGATAACGGGACTGTCTGGGGAGAAAATGCGAAATTATCCGGAACTTCCAGG AAGAGTGTGGACGAGATGATACCATCTCCTTTCTACCGTGCCAGCGAATTGAGAAATCATTATAATGGACTGACCTTGCG TTTCAAAAAAGACTGGAATGTAGAGTTTCGTGCATACAATGACGGTATCGCCTACCGTTTTGTGAATCAGGGGAAGAAGC CTTTTCGTGTGGTGACGGAAGTATCTGATTATTGTTTTCCATCGGATATGACTGCCTCCGTGCCTTATGTAAAAAGCGGT AAAGACGGTGATTATAACTCCCAGTTTTTTAATTCTTTCGAGAATACGTATACAACGGACAAACTGTCGAAGCTGAATAA ACAGCGCTTGATGTTCTTGCCGTTGGTAGTAGATGCGGGCGATGGAGTGAAAGTCTGTATCACAGAGTCCGATCTGGAAA ATTATCCGGGACTTTATCTTTCTGCTTCGGAAGGCGCGAATCGTCTGAGCAGTATGCATGCTCCTTATCCGAAGCGTACG GTACAGGGTGGTCACAACCAGCTTCAGATGTTGGTGAAGGAGCATGAAGACTATATTGCCAAAGTGGATAAGCCGAGAAA CTTCCCCTGGCGTATAGCCGTGGTTACTACCACCGATAAGGACCTTGCCGCTACCAATCTCAGCTACCTGTTAGGTGCGC CTTCACGTATGTCCGATCTTTCATGGATTAAACCGGGAAAGGTTGCTTGGGACTGGTGGAATGACTGGAATCTGGATGGC GTTGATTTTGTGACCGGAGTAAATAATCCGACTTATAAGGCATATATAGACTTTGCTTCTGCAAACGGTATCGAGTATGT GATACTTGACGAGGGATGGGCAGTGAACTTACAGGCGGATTTGATGCAGGTTGTCAAGGAGATTGACCTGAAAGAACTGG TAGATTACGCAGCTTCTAAAAATGTAGGTATCATCCTTTGGGCCGGTTATCATGCATTCGAGCGTGATATGGAAAATGTG TGCCGTCATTATGCCGAAATGGGAGTAAAGGGTTTCAAAGTGGACTTTATGGACCGTGACGATCAGGAAATGACTGCATT CAACTATCGTGCCGCTGAAATGTGTGCTAAATACAAGCTGATTCTCGACCTTCACGGCACTCATAAGCCTGCCGGATTGA ACCGTACTTATCCGAATGTGTTGAATTTCGAAGGAGTCAATGGGTTGGAGCAGATGAAATGGAGTTCACCGTCAGTAGAT CAGGTGAAGTATGATGTGATGATTCCTTTCATCCGTCAGGTTTCCGGTCCGATGGATTATACGCAGGGGGCGATGAGGAA TGCTTCCAAGGGTAACTATTATCCTTGTTATTCAGAACCGATGAGTCAGGGAACCCGTTGCCGCCAACTAGCCTTGTACG TGGTGTTTGAATCTCCTTTTAATATGTTGTGCGATACTCCGAGCAACTATATGCGCGAACCGGAATCAACGGCATTTATC GCAGAAATACCAACTGTATGGGATGAAAGTATCGTTCTTGACGGTAAAATGGGAGAGTATATTGTGACAGCACGCCGGAA AGGGGATGTCTGGTATGTAGGTGGAATTACAGATTGGAGTGCACGTGATATTGAAGTCGATTGTTCTTTCCTGGGTGATA AATCTTATCATGCTACTTTGTTTAAAGATGGTGTGAATGCTCATCGGGCAGGTCGTGATTATAAGTGTGAGTCCTTCCCG ATAAAGAAGGACGGTAAACTGAAAGTTCATCTGGCACCGGGAGGAGGTTTTGCCCTTAAGATAAAATAA
Upstream 100 bases:
>100_bases GAGAGTTTGACGTGATGATAGGTACGAACAGTCGTGATGTACAGACAAAGCGCTTTATTGCGGAATAATTATTTTGAAAT CTAATATATTAGTTACAACC
Downstream 100 bases:
>100_bases TTATTTTAGAGTTGAAACTATGTTTTTTATCGTCACCCGTCACTTTTTAGAATAAAGTATTAATATATAGACCAATAGCG GTGACGGCAAATGCTGATGG
Product: putative alpha-glucosidase
Products: NA
Alternate protein names: Glycoside Hydrolase; Glycoside Hydrolase Family; Alpha-Glucosidase Family Protein; Alpha-Glucosidase Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Esterase; Alpha-Glucosidase SusB; Alpha-Glucosidase-Like Protein; Secreted Protein
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MKKLTFLLLCVLCTLSLQAQKQFTLASPDGNLKTTITIGDRLTYDITCNGRQILTPSPISMTLDNGTVWGENAKLSGTSR KSVDEMIPSPFYRASELRNHYNGLTLRFKKDWNVEFRAYNDGIAYRFVNQGKKPFRVVTEVSDYCFPSDMTASVPYVKSG KDGDYNSQFFNSFENTYTTDKLSKLNKQRLMFLPLVVDAGDGVKVCITESDLENYPGLYLSASEGANRLSSMHAPYPKRT VQGGHNQLQMLVKEHEDYIAKVDKPRNFPWRIAVVTTTDKDLAATNLSYLLGAPSRMSDLSWIKPGKVAWDWWNDWNLDG VDFVTGVNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENV CRHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLILDLHGTHKPAGLNRTYPNVLNFEGVNGLEQMKWSSPSVD QVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCRQLALYVVFESPFNMLCDTPSNYMREPESTAFI AEIPTVWDESIVLDGKMGEYIVTARRKGDVWYVGGITDWSARDIEVDCSFLGDKSYHATLFKDGVNAHRAGRDYKCESFP IKKDGKLKVHLAPGGGFALKIK
Sequences:
>Translated_662_residues MKKLTFLLLCVLCTLSLQAQKQFTLASPDGNLKTTITIGDRLTYDITCNGRQILTPSPISMTLDNGTVWGENAKLSGTSR KSVDEMIPSPFYRASELRNHYNGLTLRFKKDWNVEFRAYNDGIAYRFVNQGKKPFRVVTEVSDYCFPSDMTASVPYVKSG KDGDYNSQFFNSFENTYTTDKLSKLNKQRLMFLPLVVDAGDGVKVCITESDLENYPGLYLSASEGANRLSSMHAPYPKRT VQGGHNQLQMLVKEHEDYIAKVDKPRNFPWRIAVVTTTDKDLAATNLSYLLGAPSRMSDLSWIKPGKVAWDWWNDWNLDG VDFVTGVNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENV CRHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLILDLHGTHKPAGLNRTYPNVLNFEGVNGLEQMKWSSPSVD QVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCRQLALYVVFESPFNMLCDTPSNYMREPESTAFI AEIPTVWDESIVLDGKMGEYIVTARRKGDVWYVGGITDWSARDIEVDCSFLGDKSYHATLFKDGVNAHRAGRDYKCESFP IKKDGKLKVHLAPGGGFALKIK >Mature_662_residues MKKLTFLLLCVLCTLSLQAQKQFTLASPDGNLKTTITIGDRLTYDITCNGRQILTPSPISMTLDNGTVWGENAKLSGTSR KSVDEMIPSPFYRASELRNHYNGLTLRFKKDWNVEFRAYNDGIAYRFVNQGKKPFRVVTEVSDYCFPSDMTASVPYVKSG KDGDYNSQFFNSFENTYTTDKLSKLNKQRLMFLPLVVDAGDGVKVCITESDLENYPGLYLSASEGANRLSSMHAPYPKRT VQGGHNQLQMLVKEHEDYIAKVDKPRNFPWRIAVVTTTDKDLAATNLSYLLGAPSRMSDLSWIKPGKVAWDWWNDWNLDG VDFVTGVNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENV CRHYAEMGVKGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLILDLHGTHKPAGLNRTYPNVLNFEGVNGLEQMKWSSPSVD QVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCRQLALYVVFESPFNMLCDTPSNYMREPESTAFI AEIPTVWDESIVLDGKMGEYIVTARRKGDVWYVGGITDWSARDIEVDCSFLGDKSYHATLFKDGVNAHRAGRDYKCESFP IKKDGKLKVHLAPGGGFALKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74851; Mature: 74851
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTFLLLCVLCTLSLQAQKQFTLASPDGNLKTTITIGDRLTYDITCNGRQILTPSPIS CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCEEEEEEEECCCEEECCCCCE MTLDNGTVWGENAKLSGTSRKSVDEMIPSPFYRASELRNHYNGLTLRFKKDWNVEFRAYN EEECCCEEECCCCEECCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEEEC DGIAYRFVNQGKKPFRVVTEVSDYCFPSDMTASVPYVKSGKDGDYNSQFFNSFENTYTTD CCEEEEEECCCCCCEEEEEHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHH KLSKLNKQRLMFLPLVVDAGDGVKVCITESDLENYPGLYLSASEGANRLSSMHAPYPKRT HHHHHCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHCCCCCCCHH VQGGHNQLQMLVKEHEDYIAKVDKPRNFPWRIAVVTTTDKDLAATNLSYLLGAPSRMSDL HCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHCCCHHHHCCCCCCCCC SWIKPGKVAWDWWNDWNLDGVDFVTGVNNPTYKAYIDFASANGIEYVILDEGWAVNLQAD CCCCCCCEEEECCCCCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCEEEEEHHH LMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRD HHHHHHHCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC DQEMTAFNYRAAEMCAKYKLILDLHGTHKPAGLNRTYPNVLNFEGVNGLEQMKWSSPSVD CCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHH QVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCRQLALYVVFESPF HEEEEEEHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEEEEEECCCC NMLCDTPSNYMREPESTAFIAEIPTVWDESIVLDGKMGEYIVTARRKGDVWYVGGITDWS HHCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCEEEECCCCCCC ARDIEVDCSFLGDKSYHATLFKDGVNAHRAGRDYKCESFPIKKDGKLKVHLAPGGGFALK CCEEEEEEEEECCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE IK EC >Mature Secondary Structure MKKLTFLLLCVLCTLSLQAQKQFTLASPDGNLKTTITIGDRLTYDITCNGRQILTPSPIS CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCEEEEEEEECCCEEECCCCCE MTLDNGTVWGENAKLSGTSRKSVDEMIPSPFYRASELRNHYNGLTLRFKKDWNVEFRAYN EEECCCEEECCCCEECCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEEEC DGIAYRFVNQGKKPFRVVTEVSDYCFPSDMTASVPYVKSGKDGDYNSQFFNSFENTYTTD CCEEEEEECCCCCCEEEEEHHHHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCHH KLSKLNKQRLMFLPLVVDAGDGVKVCITESDLENYPGLYLSASEGANRLSSMHAPYPKRT HHHHHCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHCCCCCCCHH VQGGHNQLQMLVKEHEDYIAKVDKPRNFPWRIAVVTTTDKDLAATNLSYLLGAPSRMSDL HCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHCCCHHHHCCCCCCCCC SWIKPGKVAWDWWNDWNLDGVDFVTGVNNPTYKAYIDFASANGIEYVILDEGWAVNLQAD CCCCCCCEEEECCCCCCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCEEEEEHHH LMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRD HHHHHHHCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC DQEMTAFNYRAAEMCAKYKLILDLHGTHKPAGLNRTYPNVLNFEGVNGLEQMKWSSPSVD CCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHH QVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCRQLALYVVFESPF HEEEEEEHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEEEEEEECCCC NMLCDTPSNYMREPESTAFIAEIPTVWDESIVLDGKMGEYIVTARRKGDVWYVGGITDWS HHCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCEEEECCCCCCC ARDIEVDCSFLGDKSYHATLFKDGVNAHRAGRDYKCESFPIKKDGKLKVHLAPGGGFALK CCEEEEEEEEECCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEE IK EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA