Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347278

Identifier: 29347278

GI number: 29347278

Start: 2345567

End: 2347219

Strand: Reverse

Name: 29347278

Synonym: BT_1868

Alternate gene names: NA

Gene position: 2347219-2345567 (Counterclockwise)

Preceding gene: 29347281

Following gene: 29347277

Centisome position: 37.49

GC content: 32.91

Gene sequence:

>1653_bases
ATGAAACATTTATCATATGTGTTAACACTAGTGCTAATATTTTTTGTAGCTTGTAGACGGCAACAATCAGTGTCTACTCC
GTTAAATGCTGCAGAGCGAATACTCAAAGACAATCCGGATAGTGCTTTTCGTATTATACAAAGTATTCCTTATCCTGATA
AACTGGATAAGGAAGATTTAGTGCGTTGGTGCTTGATAGCTGGTAAAGCTGCTGACAAATTGAATACGTCTCTTCCTCCT
TCTTACTATTTCGATCATGCATATTCTTGGCTGATTAAATATGGAATAACTAAAGATCAAGTAGATATAGGGTTGTTTTG
GGGGCGCTCTCTAGTGGCTGATGGGGAATATGATAAGGCAATGAGCATTTATGCAGAAGTATTGGCAATCGCAAAAGAGA
AAGAACTATATAATGAAGCAGGCTATATATGTACGTATATAGCTGATCTATATGATTTTAGGGATATGCAAAAGGAGGCC
AGACATCAATATGAAGAAGCTCAAGGACTGTTTAAGAAAGCGGGAAATATCAAAAGTCATGTATTTGCTTTACAAAATAT
AGCTCGTGAATGGGCCTTTTTCGATTCTCTGGAATGTGCTTTAAAATATATGGGAATAGCGGATTCTATTGCCCAGCAGT
TGAATGATAATGAGGTTAGCTCTTCTCTAGATAATGCTTTTGGTAACATTTATTTGGCAATGAACCAATACTCTAAAGCA
GAATATCATTTCCTTAAATCAACATCTTTGGATAAAGAAAATGAATTGTATAATACAAACTGTCTGATCAAGCTATATCT
GCAAGTAGGTGATATTTTAAAAGCTCGTGAGCTTTTGTATACACTACCTTTAGATAGCTCTGAATATGAATATGGTATAG
AGCGGGCTTTTTATCGGGTAACTAAAGCGGAAGGTAGCTATAAAGAAGCACTTAAACATTTAGAAACATGTGAATCCATT
AGTGACTCTATTACTATACTACAGAATAATACAAAAATACTGGAAGTAGAAAAGAAATTTAATAATTTGAGGCTTAAAGA
AAAGAATCATCAATTGGAACTCACTCAGCAAAAGTATATGATTATAATTTGTATATGTTTGATTTTTGGTATAGCTATCA
CATTACTCTATTTGCTGTACAGGCAAAAAACCAAAAATGAAATGAATAAGCAAGCCCTTGAGTTGAATAATATAAAACTA
GAGTTGGCTAATGCCTTTATAGAGTTGGATAAAAAGAAAAATCAATTAGTGGTTTCGCAAAAAGAGAATGAAAGTAGTCA
AAGTCGATTAGAAAATGAAATTAAAAACTTAACCTCTAATTATAAGAAATTGCAGCGAAGAAGAATTGTTACGTCAATAA
TTTTTAGAAAATTAGTGAATATCGCTGAACGTAGTACGAATTGCAATGAACCATTACTAACGGAGCAATTATGGTTCTCT
ATTGTTTCTGAAATAACAGAAACTTATCCGAATTTAAAAATGTATTTATTAGAACGATACCCAAATTTATCAAGTCAGGA
ATGGGAATATTGTTGTTTATGCATGTTTAATTTTGATTCGAAAACCGAAGCTAGATTGCTTGGTATTAATCCTAGTTCAG
TTTCTACAAAGCGATTAAGATTCAGACAAAAATTGGGAATCTCTGCTTTATAG

Upstream 100 bases:

>100_bases
TGTGTTTTCAAGGGTTCAACGGAAAAATGGGAAAAGAATTTTTTATCCCCTCGTTTAACTTACTTGTTTGTTTTTTATTC
ATATAAGCAAAACTATAATA

Downstream 100 bases:

>100_bases
GAAGAAGCTAACTTGTGTGAGTACCTGATTAACGAGCTTTTAAAATAATCCTATTTAAGTAGTTCTTTTCTGAATAAGGC
AATGCATGCTGCTATATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDLVRWCLIAGKAADKLNTSLPP
SYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKAMSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEA
RHQYEEAQGLFKKAGNIKSHVFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA
EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRVTKAEGSYKEALKHLETCESI
SDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYMIIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKL
ELANAFIELDKKKNQLVVSQKENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS
IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLRFRQKLGISAL

Sequences:

>Translated_550_residues
MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDLVRWCLIAGKAADKLNTSLPP
SYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKAMSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEA
RHQYEEAQGLFKKAGNIKSHVFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA
EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRVTKAEGSYKEALKHLETCESI
SDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYMIIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKL
ELANAFIELDKKKNQLVVSQKENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS
IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLRFRQKLGISAL
>Mature_550_residues
MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDLVRWCLIAGKAADKLNTSLPP
SYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKAMSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEA
RHQYEEAQGLFKKAGNIKSHVFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA
EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRVTKAEGSYKEALKHLETCESI
SDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYMIIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKL
ELANAFIELDKKKNQLVVSQKENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS
IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLRFRQKLGISAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63872; Mature: 63872

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDL
CCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH
VRWCLIAGKAADKLNTSLPPSYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKA
HHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCHHHH
MSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEARHQYEEAQGLFKKAGNIKSH
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCH
EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRV
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH
TKAEGSYKEALKHLETCESISDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYM
HHCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHHCCCCEECCCCCEEEHHHHHH
IIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKLELANAFIELDKKKNQLVVSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEC
KENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLR
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHH
FRQKLGISAL
HHHHCCCCCC
>Mature Secondary Structure
MKHLSYVLTLVLIFFVACRRQQSVSTPLNAAERILKDNPDSAFRIIQSIPYPDKLDKEDL
CCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHH
VRWCLIAGKAADKLNTSLPPSYYFDHAYSWLIKYGITKDQVDIGLFWGRSLVADGEYDKA
HHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCHHHH
MSIYAEVLAIAKEKELYNEAGYICTYIADLYDFRDMQKEARHQYEEAQGLFKKAGNIKSH
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VFALQNIAREWAFFDSLECALKYMGIADSIAQQLNDNEVSSSLDNAFGNIYLAMNQYSKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCH
EYHFLKSTSLDKENELYNTNCLIKLYLQVGDILKARELLYTLPLDSSEYEYGIERAFYRV
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH
TKAEGSYKEALKHLETCESISDSITILQNNTKILEVEKKFNNLRLKEKNHQLELTQQKYM
HHCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEHHHHCCCCEECCCCCEEEHHHHHH
IIICICLIFGIAITLLYLLYRQKTKNEMNKQALELNNIKLELANAFIELDKKKNQLVVSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEC
KENESSQSRLENEIKNLTSNYKKLQRRRIVTSIIFRKLVNIAERSTNCNEPLLTEQLWFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IVSEITETYPNLKMYLLERYPNLSSQEWEYCCLCMFNFDSKTEARLLGINPSSVSTKRLR
HHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHH
FRQKLGISAL
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA