| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347277
Identifier: 29347277
GI number: 29347277
Start: 2344913
End: 2345278
Strand: Reverse
Name: 29347277
Synonym: BT_1867
Alternate gene names: NA
Gene position: 2345278-2344913 (Counterclockwise)
Preceding gene: 29347278
Following gene: 29347276
Centisome position: 37.46
GC content: 31.42
Gene sequence:
>366_bases ATGAAAAAGTTTGAGCTTGTATTATTAGTGATGTTATTAATACATAGTTTTTCAGTTATGATTGAAGCTAAACAGCATGT TAAAACTAAAAGTGATTGGGTTATACAAAGAACTCCTGTTGACCCCGAATGGCTTAAAGTGTATGTGGATGATGAAAGCA AAAGACTTTGTCTTAATTTTAAAGACAGTTTTGCTCCTATAACTGTTGAAGTAAAAGATATCGAAAAACAAATCGTATTT CAATCTATAATATTCCCTGTTGCGGCAGGAGAGTATACTCTTTATTTAGGTGATCTATCATTAGGTCAATATGAGTTGTA TATGTACAATGCGAGTGTTAAGGTTGTAGGAAACTTTACTCTTTAA
Upstream 100 bases:
>100_bases TTGTTGATAATCAAGTTCTGCCTGTCTATTTTGATATTGTTTTGAATATAACAAACGAATCATCTATCCCCTATATTTGC AAAAAACAAAATTAATAAAT
Downstream 100 bases:
>100_bases GGATTGATATATAGATATTTCAGAAGAATAGTATTATCAATGCAATAATTATTTAAATCTAAAGTTATGAGAGCAAACAC AATGTCTAATTTAAGGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKKFELVLLVMLLIHSFSVMIEAKQHVKTKSDWVIQRTPVDPEWLKVYVDDESKRLCLNFKDSFAPITVEVKDIEKQIVF QSIIFPVAAGEYTLYLGDLSLGQYELYMYNASVKVVGNFTL
Sequences:
>Translated_121_residues MKKFELVLLVMLLIHSFSVMIEAKQHVKTKSDWVIQRTPVDPEWLKVYVDDESKRLCLNFKDSFAPITVEVKDIEKQIVF QSIIFPVAAGEYTLYLGDLSLGQYELYMYNASVKVVGNFTL >Mature_121_residues MKKFELVLLVMLLIHSFSVMIEAKQHVKTKSDWVIQRTPVDPEWLKVYVDDESKRLCLNFKDSFAPITVEVKDIEKQIVF QSIIFPVAAGEYTLYLGDLSLGQYELYMYNASVKVVGNFTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13997; Mature: 13997
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFELVLLVMLLIHSFSVMIEAKQHVKTKSDWVIQRTPVDPEWLKVYVDDESKRLCLNF CCHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCEEEEECCCCHHHEEEEECCCCCEEEEEE KDSFAPITVEVKDIEKQIVFQSIIFPVAAGEYTLYLGDLSLGQYELYMYNASVKVVGNFT CCCCCEEEEEHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCEEEEEEEECEEEEEEEEC L C >Mature Secondary Structure MKKFELVLLVMLLIHSFSVMIEAKQHVKTKSDWVIQRTPVDPEWLKVYVDDESKRLCLNF CCHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCEEEEECCCCHHHEEEEECCCCCEEEEEE KDSFAPITVEVKDIEKQIVFQSIIFPVAAGEYTLYLGDLSLGQYELYMYNASVKVVGNFT CCCCCEEEEEHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCEEEEEEEECEEEEEEEEC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA