| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347266
Identifier: 29347266
GI number: 29347266
Start: 2328407
End: 2329726
Strand: Reverse
Name: 29347266
Synonym: BT_1856
Alternate gene names: NA
Gene position: 2329726-2328407 (Counterclockwise)
Preceding gene: 29347267
Following gene: 29347262
Centisome position: 37.21
GC content: 43.79
Gene sequence:
>1320_bases ATGACAAAAAATTATCTATTCTTACTGTTGGGTTTGCTGCTTGCAGCGTGTAGTTCTGATGACAAGGACGAACAACCGAT TTTAGTAACCAATGTTGTAATGCCTGCTTCGGGAACAGTATTCAAGCCCGGTGAGAAGGTAACGATAATGGCGAAAGGAT TTCAAGACAATGATGAAATCATGTTCGATATTCGCTGGCCGCTTCAAGACGAAGTGCTGCATGAAGGATATGCTAAAGGA GGACGGGGTGTTATAACGGAAAAGACGGCTACGAGCATTACTTTTCTGGCTCCCGGACACTGGCCTGCTTCTACAACGGA AATCTTGTTACGCCGCTCCGGTCAAATGATGTCTTTAGGAAAGATTTCGGTGGCGGATGGACAGGCACCCAAAGATTTTC AGCTTTATGGTATCATTAATTCCCGTTCCAATACCCACCGTCCTCATGCTATCGAATACATCAATCTTGAAAAGCCTCAG ACGGCAGAGATAGTACGACTTGCAGACAATCAAGACTTCTCTTGTGTAGTCAACCTTCCCGGAAGCTGGAGCCTTAGTGG AGTATGGACGAAGGATGATCGCCGTACGACCGGACTTTATGATCTTTCTATGAACTATTGGGAAAAGCCGGGAGCTGATC AGCTTGTAACAATGGGGATAGCGACCGCTAACTCTGTATTTGGGGTATATCAAGGCGGAGACCGTTTATTTGTTAAAACA GTTAATGTGATGCCCTATACCAGAATGTATGTGCCGGAGAAACCTGATTATGGTTTTCTGCTGCCCGAAGGGATGAAGGC TGAAGCATTGTCACGTTATCCCTGTATACAAATGAGTGATGGAAATATACTCTGTTCGGCTGATAACGGCGATGGAACTT TTTCACCAGTAGTCTTGAACGGGCAAAATATAGAAGAGAAAAGTATATATGTTGGCGAACCGATAGAGGCTGTGGCATTG ATCCCTTTTTGGATAGTTAAGCCTGTAGAAGGTATGGGAACGGCTAAATATACACGTGTTGGCGGATATATCGTATCGAA GAGAAATGGTGCTACAATAACAGAGGGAGATGGAACAGAATTTAGGCTATGGAACCCGACTACAAAGATGCTGGATGAAC CTTTCACCACATTCCCTAATGCTGCGTGTTTAGTAGCCACACTTGTTTCGGATGATTTTAAGAAACAGGAGCTTTATGTA TTGTTTGATGGTAGTCGGAATGGAAGGCTGATTTATGTATATGATTTACTAAAAGGTAGCTGGGAGTCATTATATCCAGG GGGCGGATTTCCTTATTCAGAAATCGTATTAGCCCGATAA
Upstream 100 bases:
>100_bases TCCGTTGGGAGAAAAAACTAGTCGGACTGTTAAAAAGTAAAAGAGTAAGATATTTGCTAATGAAAAACAGTACATTTGCA CAGATTAATACACAAGTGCT
Downstream 100 bases:
>100_bases GGTTATTACTCAGCTCTTCTCCGGGCTACTATGCACAAAGGCCCTTTTTCATGCTTATATGAAGCAATGGAGACAAAGCC GGACTGCAAGAGTATGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTKNYLFLLLGLLLAACSSDDKDEQPILVTNVVMPASGTVFKPGEKVTIMAKGFQDNDEIMFDIRWPLQDEVLHEGYAKG GRGVITEKTATSITFLAPGHWPASTTEILLRRSGQMMSLGKISVADGQAPKDFQLYGIINSRSNTHRPHAIEYINLEKPQ TAEIVRLADNQDFSCVVNLPGSWSLSGVWTKDDRRTTGLYDLSMNYWEKPGADQLVTMGIATANSVFGVYQGGDRLFVKT VNVMPYTRMYVPEKPDYGFLLPEGMKAEALSRYPCIQMSDGNILCSADNGDGTFSPVVLNGQNIEEKSIYVGEPIEAVAL IPFWIVKPVEGMGTAKYTRVGGYIVSKRNGATITEGDGTEFRLWNPTTKMLDEPFTTFPNAACLVATLVSDDFKKQELYV LFDGSRNGRLIYVYDLLKGSWESLYPGGGFPYSEIVLAR
Sequences:
>Translated_439_residues MTKNYLFLLLGLLLAACSSDDKDEQPILVTNVVMPASGTVFKPGEKVTIMAKGFQDNDEIMFDIRWPLQDEVLHEGYAKG GRGVITEKTATSITFLAPGHWPASTTEILLRRSGQMMSLGKISVADGQAPKDFQLYGIINSRSNTHRPHAIEYINLEKPQ TAEIVRLADNQDFSCVVNLPGSWSLSGVWTKDDRRTTGLYDLSMNYWEKPGADQLVTMGIATANSVFGVYQGGDRLFVKT VNVMPYTRMYVPEKPDYGFLLPEGMKAEALSRYPCIQMSDGNILCSADNGDGTFSPVVLNGQNIEEKSIYVGEPIEAVAL IPFWIVKPVEGMGTAKYTRVGGYIVSKRNGATITEGDGTEFRLWNPTTKMLDEPFTTFPNAACLVATLVSDDFKKQELYV LFDGSRNGRLIYVYDLLKGSWESLYPGGGFPYSEIVLAR >Mature_438_residues TKNYLFLLLGLLLAACSSDDKDEQPILVTNVVMPASGTVFKPGEKVTIMAKGFQDNDEIMFDIRWPLQDEVLHEGYAKGG RGVITEKTATSITFLAPGHWPASTTEILLRRSGQMMSLGKISVADGQAPKDFQLYGIINSRSNTHRPHAIEYINLEKPQT AEIVRLADNQDFSCVVNLPGSWSLSGVWTKDDRRTTGLYDLSMNYWEKPGADQLVTMGIATANSVFGVYQGGDRLFVKTV NVMPYTRMYVPEKPDYGFLLPEGMKAEALSRYPCIQMSDGNILCSADNGDGTFSPVVLNGQNIEEKSIYVGEPIEAVALI PFWIVKPVEGMGTAKYTRVGGYIVSKRNGATITEGDGTEFRLWNPTTKMLDEPFTTFPNAACLVATLVSDDFKKQELYVL FDGSRNGRLIYVYDLLKGSWESLYPGGGFPYSEIVLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48570; Mature: 48439
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNYLFLLLGLLLAACSSDDKDEQPILVTNVVMPASGTVFKPGEKVTIMAKGFQDNDEI CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEEECCCCCCCE MFDIRWPLQDEVLHEGYAKGGRGVITEKTATSITFLAPGHWPASTTEILLRRSGQMMSLG EEEEECCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEC KISVADGQAPKDFQLYGIINSRSNTHRPHAIEYINLEKPQTAEIVRLADNQDFSCVVNLP EEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECC GSWSLSGVWTKDDRRTTGLYDLSMNYWEKPGADQLVTMGIATANSVFGVYQGGDRLFVKT CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCEEEEEE VNVMPYTRMYVPEKPDYGFLLPEGMKAEALSRYPCIQMSDGNILCSADNGDGTFSPVVLN EECCCEEEEECCCCCCCCEECCCCCCHHHHHCCCEEEECCCCEEEEECCCCCEEEEEEEC GQNIEEKSIYVGEPIEAVALIPFWIVKPVEGMGTAKYTRVGGYIVSKRNGATITEGDGTE CCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCEEEECCCCCEEECCCCCE FRLWNPTTKMLDEPFTTFPNAACLVATLVSDDFKKQELYVLFDGSRNGRLIYVYDLLKGS EEEECCHHHHHCCCCCCCCCHHHHHEEHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCC WESLYPGGGFPYSEIVLAR HHHCCCCCCCCHHHEEEEC >Mature Secondary Structure TKNYLFLLLGLLLAACSSDDKDEQPILVTNVVMPASGTVFKPGEKVTIMAKGFQDNDEI CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEEECCCCCCCE MFDIRWPLQDEVLHEGYAKGGRGVITEKTATSITFLAPGHWPASTTEILLRRSGQMMSLG EEEEECCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHCCCCEEEEC KISVADGQAPKDFQLYGIINSRSNTHRPHAIEYINLEKPQTAEIVRLADNQDFSCVVNLP EEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECC GSWSLSGVWTKDDRRTTGLYDLSMNYWEKPGADQLVTMGIATANSVFGVYQGGDRLFVKT CCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEECCCEEEEEE VNVMPYTRMYVPEKPDYGFLLPEGMKAEALSRYPCIQMSDGNILCSADNGDGTFSPVVLN EECCCEEEEECCCCCCCCEECCCCCCHHHHHCCCEEEECCCCEEEEECCCCCEEEEEEEC GQNIEEKSIYVGEPIEAVALIPFWIVKPVEGMGTAKYTRVGGYIVSKRNGATITEGDGTE CCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCEEEECCCCCEEECCCCCE FRLWNPTTKMLDEPFTTFPNAACLVATLVSDDFKKQELYVLFDGSRNGRLIYVYDLLKGS EEEECCHHHHHCCCCCCCCCHHHHHEEHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCC WESLYPGGGFPYSEIVLAR HHHCCCCCCCCHHHEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA