| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347256
Identifier: 29347256
GI number: 29347256
Start: 2317376
End: 2319403
Strand: Reverse
Name: 29347256
Synonym: BT_1846
Alternate gene names: NA
Gene position: 2319403-2317376 (Counterclockwise)
Preceding gene: 29347257
Following gene: 29347255
Centisome position: 37.05
GC content: 45.76
Gene sequence:
>2028_bases ATGGCAGTTACCGCTACGATCCTTGCATCCTGCGGTGGGGCCAAAACAACAACTGCCGAGGCAGATAAATTTGATTATAC AGTGGAACAATTTGCAGACTTACAAATATTGCGGTACAAGGTTCCCGAATTCGAAACCTTGACGCTGAAACAGAAAGAAC TGGTTTATTACCTGACTCAGGCTGCGCTGGAAGGACGCGACATCCTGTTTGATCAGAACGGAAAGTATAACCTGAGAATC CGTCGGATGCTCGAAGCCGTTTACACCAATTATAAAGGAGACAAGTCGGCTCCCGACTTCAAAAATATGGAAGTGTACCT CAAACGGGTATGGTTCTCCAATGGTATTCATCATCATTACGGCATGGAAAAGTTTGTGCCCGGTTTCTCGCAGGACTTCT TGAAACAGGCAGTGCTCGGAACGGACGCCCAATTACTTCCGTTATCAGAAGGACAGACTGCCGAACAACTCTGTGATGAG CTCTTCCCGGTTATGTTTGATCCGGCTATCCTGGCAAAGCGTGTAAATCAGGCGGACGGTGAAGACTTGGTGCTGACTTC TGCCTGCAATTATTACGACGGAGTCACTCAGCAGGAAGCGGAAAGCTTCTACGGAGCAATGAAAGACCCAAAAGATGAAA CTCCGGTTTCTTACGGACTCAACAGCCGATTAGTGAAAGAAGATGGGAAAATACAGGAAAAAGTCTGGAAGGTAGGCGGA CTTTATACTCAAGCGATTGAAAAGATTGTGTACTGGTTGAAGAAAGCGGAAACTGTTGCCGAAAATGATGCACAGAAAGC TGTGATCAGCAAACTGATTCAATTTTACGAAACAGGCAGCCTGAAAGACTTCGATGAATATGCTATCCTTTGGGTGAAAG ACCTTGATTCAAGAATTGACTTCGTTAATGGCTTTACAGAAAGTTACGGCGATCCGCTGGGAGTGAAAGCCAGCTGGGAA TCACTGGTCAACTTCAAAGACTTGGATGCTACGCACCGCACAGAGATTATCAGCAGCAATGCGCAATGGTTCGAAGATCA TTCGCCGGTTGATAAATCTTTCAAAAAGGAAAAGGTAAAAGGGGTATCTGCCAAGGTGATCACTGCCGCTATTCTTGCCG GCGACTTATATCCTGCAACTGCCATCGGTATCAATCTTCCGAACGCTAACTGGATTCGTGCCCATCACGGCTCTAAGTCA GTTACTATCGGCAATATCACAGATGCTTATAATAAAGCTGCCCACGGTAACGGATTCAATGAAGAGTTTGTCTGCAATGA CGAAGAGAGACAGCGGATCGACCAATATGGCGACCTGACAGGTGAACTTCATACAGACTTACATGAATGTCTGGGACATG GTTCGGGCAAATTGCTTCCGGGAGTAGACCCTGACGCTTTGAAAGCGTATGGTTCCACTATAGAAGAAGCACGTGCCGAC CTGTTCGGATTGTATTATGTGGCCGACCCGAAACTGGTGGAACTGAAACTTGTTCCGGATGCGGAGGCTTATAAAGCTGA ATATTATACTTTCCTGATGAACGGTCTGATGACTCAGCTTGTACGTATCGAACCGGGAAATAATATCGAAGAAGCTCATA TGCGCAACCGCCAGCTGATTGCCCGCTGGGTATTTGAGAAAGGTGCTCCTGACAAAGTGGTCGAAATGGTGAAGAAGGAT GGAAAGACCTATGTTGTAGTCAATGATTATGAGAAAGTCCGTCAGTTGTTTGGTGAACTGCTGGCTGAAATCCAGCGAAT CAAATCGACCGGTGATTTTGAGGGTGCCCGTACATTGGTCGAAAATTATGCCGTGAAGGTTGATCCTGCTTTGCACGCCG AAGTGTTGGCACGCTATAAGAAACTGAATCTGGCTCCTTACAAAGGTTTTATAAATCCGGTTTATGAACTGGTGACTGAC AAGGATGGAAATATCACGGACGTTACCGTGTCTTATAATGAAGACTATGTAGAACAAATGTTGCGCTACAGCAAAGATTA TTCTCCGTTGCCTTCCGTAAATAATTAA
Upstream 100 bases:
>100_bases CTGACCAAAAGGAATTACCTCTGAATGAAAAGTTCGGGGATAATTCCTTTTCTTATTTAATTAATCAATATCAGTAATTA TGAAAAAACATTTTATTTCG
Downstream 100 bases:
>100_bases TATTGAAAATGGATATAAAAGAACAACTGAAGGATATCAAAACACAGCTCCGTCTCTCTATGAACGGGGCTGTGTCCCAA AGTATGCGTGAGAAGGGATT
Product: putative dipeptidyl-peptidase III
Products: NA
Alternate protein names: Dipeptidyl-Peptidase III; Membrane Attached Peptidase; M49 Family Peptidase; Peptidase Family M; DipeptidyL-Peptidase III; MutT/Nudix Family Protein
Number of amino acids: Translated: 675; Mature: 674
Protein sequence:
>675_residues MAVTATILASCGGAKTTTAEADKFDYTVEQFADLQILRYKVPEFETLTLKQKELVYYLTQAALEGRDILFDQNGKYNLRI RRMLEAVYTNYKGDKSAPDFKNMEVYLKRVWFSNGIHHHYGMEKFVPGFSQDFLKQAVLGTDAQLLPLSEGQTAEQLCDE LFPVMFDPAILAKRVNQADGEDLVLTSACNYYDGVTQQEAESFYGAMKDPKDETPVSYGLNSRLVKEDGKIQEKVWKVGG LYTQAIEKIVYWLKKAETVAENDAQKAVISKLIQFYETGSLKDFDEYAILWVKDLDSRIDFVNGFTESYGDPLGVKASWE SLVNFKDLDATHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAILAGDLYPATAIGINLPNANWIRAHHGSKS VTIGNITDAYNKAAHGNGFNEEFVCNDEERQRIDQYGDLTGELHTDLHECLGHGSGKLLPGVDPDALKAYGSTIEEARAD LFGLYYVADPKLVELKLVPDAEAYKAEYYTFLMNGLMTQLVRIEPGNNIEEAHMRNRQLIARWVFEKGAPDKVVEMVKKD GKTYVVVNDYEKVRQLFGELLAEIQRIKSTGDFEGARTLVENYAVKVDPALHAEVLARYKKLNLAPYKGFINPVYELVTD KDGNITDVTVSYNEDYVEQMLRYSKDYSPLPSVNN
Sequences:
>Translated_675_residues MAVTATILASCGGAKTTTAEADKFDYTVEQFADLQILRYKVPEFETLTLKQKELVYYLTQAALEGRDILFDQNGKYNLRI RRMLEAVYTNYKGDKSAPDFKNMEVYLKRVWFSNGIHHHYGMEKFVPGFSQDFLKQAVLGTDAQLLPLSEGQTAEQLCDE LFPVMFDPAILAKRVNQADGEDLVLTSACNYYDGVTQQEAESFYGAMKDPKDETPVSYGLNSRLVKEDGKIQEKVWKVGG LYTQAIEKIVYWLKKAETVAENDAQKAVISKLIQFYETGSLKDFDEYAILWVKDLDSRIDFVNGFTESYGDPLGVKASWE SLVNFKDLDATHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAILAGDLYPATAIGINLPNANWIRAHHGSKS VTIGNITDAYNKAAHGNGFNEEFVCNDEERQRIDQYGDLTGELHTDLHECLGHGSGKLLPGVDPDALKAYGSTIEEARAD LFGLYYVADPKLVELKLVPDAEAYKAEYYTFLMNGLMTQLVRIEPGNNIEEAHMRNRQLIARWVFEKGAPDKVVEMVKKD GKTYVVVNDYEKVRQLFGELLAEIQRIKSTGDFEGARTLVENYAVKVDPALHAEVLARYKKLNLAPYKGFINPVYELVTD KDGNITDVTVSYNEDYVEQMLRYSKDYSPLPSVNN >Mature_674_residues AVTATILASCGGAKTTTAEADKFDYTVEQFADLQILRYKVPEFETLTLKQKELVYYLTQAALEGRDILFDQNGKYNLRIR RMLEAVYTNYKGDKSAPDFKNMEVYLKRVWFSNGIHHHYGMEKFVPGFSQDFLKQAVLGTDAQLLPLSEGQTAEQLCDEL FPVMFDPAILAKRVNQADGEDLVLTSACNYYDGVTQQEAESFYGAMKDPKDETPVSYGLNSRLVKEDGKIQEKVWKVGGL YTQAIEKIVYWLKKAETVAENDAQKAVISKLIQFYETGSLKDFDEYAILWVKDLDSRIDFVNGFTESYGDPLGVKASWES LVNFKDLDATHRTEIISSNAQWFEDHSPVDKSFKKEKVKGVSAKVITAAILAGDLYPATAIGINLPNANWIRAHHGSKSV TIGNITDAYNKAAHGNGFNEEFVCNDEERQRIDQYGDLTGELHTDLHECLGHGSGKLLPGVDPDALKAYGSTIEEARADL FGLYYVADPKLVELKLVPDAEAYKAEYYTFLMNGLMTQLVRIEPGNNIEEAHMRNRQLIARWVFEKGAPDKVVEMVKKDG KTYVVVNDYEKVRQLFGELLAEIQRIKSTGDFEGARTLVENYAVKVDPALHAEVLARYKKLNLAPYKGFINPVYELVTDK DGNITDVTVSYNEDYVEQMLRYSKDYSPLPSVNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI86792661, Length=649, Percent_Identity=24.191063174114, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI18491024, Length=649, Percent_Identity=24.191063174114, Blast_Score=132, Evalue=1e-30, Organism=Caenorhabditis elegans, GI193202526, Length=703, Percent_Identity=24.4665718349929, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI193202528, Length=703, Percent_Identity=24.4665718349929, Blast_Score=130, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324515, Length=422, Percent_Identity=26.7772511848341, Blast_Score=117, Evalue=4e-27, Organism=Drosophila melanogaster, GI24645049, Length=651, Percent_Identity=24.5775729646697, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24645047, Length=651, Percent_Identity=24.5775729646697, Blast_Score=130, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76092; Mature: 75960
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTATILASCGGAKTTTAEADKFDYTVEQFADLQILRYKVPEFETLTLKQKELVYYLTQ CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHEEECCCCCEEEEEHHHHHHHHHHH AALEGRDILFDQNGKYNLRIRRMLEAVYTNYKGDKSAPDFKNMEVYLKRVWFSNGIHHHY HHHCCCCEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHC GMEKFVPGFSQDFLKQAVLGTDAQLLPLSEGQTAEQLCDELFPVMFDPAILAKRVNQADG CHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCC EDLVLTSACNYYDGVTQQEAESFYGAMKDPKDETPVSYGLNSRLVKEDGKIQEKVWKVGG CCEEEEECCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCC LYTQAIEKIVYWLKKAETVAENDAQKAVISKLIQFYETGSLKDFDEYAILWVKDLDSRID HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHH FVNGFTESYGDPLGVKASWESLVNFKDLDATHRTEIISSNAQWFEDHSPVDKSFKKEKVK HHHHHHHHCCCCCCCCCCHHHHCCCHHCCCHHHHHHHCCCCHHCCCCCCHHHHHHHHHHC GVSAKVITAAILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN CCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCHHHHHHHCCCCCCC EEFVCNDEERQRIDQYGDLTGELHTDLHECLGHGSGKLLPGVDPDALKAYGSTIEEARAD CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LFGLYYVADPKLVELKLVPDAEAYKAEYYTFLMNGLMTQLVRIEPGNNIEEAHMRNRQLI HEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH ARWVFEKGAPDKVVEMVKKDGKTYVVVNDYEKVRQLFGELLAEIQRIKSTGDFEGARTLV HHHHHHCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ENYAVKVDPALHAEVLARYKKLNLAPYKGFINPVYELVTDKDGNITDVTVSYNEDYVEQM HHCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHH LRYSKDYSPLPSVNN HHHCCCCCCCCCCCC >Mature Secondary Structure AVTATILASCGGAKTTTAEADKFDYTVEQFADLQILRYKVPEFETLTLKQKELVYYLTQ CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHEEECCCCCEEEEEHHHHHHHHHHH AALEGRDILFDQNGKYNLRIRRMLEAVYTNYKGDKSAPDFKNMEVYLKRVWFSNGIHHHY HHHCCCCEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHC GMEKFVPGFSQDFLKQAVLGTDAQLLPLSEGQTAEQLCDELFPVMFDPAILAKRVNQADG CHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCC EDLVLTSACNYYDGVTQQEAESFYGAMKDPKDETPVSYGLNSRLVKEDGKIQEKVWKVGG CCEEEEECCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCC LYTQAIEKIVYWLKKAETVAENDAQKAVISKLIQFYETGSLKDFDEYAILWVKDLDSRID HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHH FVNGFTESYGDPLGVKASWESLVNFKDLDATHRTEIISSNAQWFEDHSPVDKSFKKEKVK HHHHHHHHCCCCCCCCCCHHHHCCCHHCCCHHHHHHHCCCCHHCCCCCCHHHHHHHHHHC GVSAKVITAAILAGDLYPATAIGINLPNANWIRAHHGSKSVTIGNITDAYNKAAHGNGFN CCHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCHHHHHHHCCCCCCC EEFVCNDEERQRIDQYGDLTGELHTDLHECLGHGSGKLLPGVDPDALKAYGSTIEEARAD CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LFGLYYVADPKLVELKLVPDAEAYKAEYYTFLMNGLMTQLVRIEPGNNIEEAHMRNRQLI HEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH ARWVFEKGAPDKVVEMVKKDGKTYVVVNDYEKVRQLFGELLAEIQRIKSTGDFEGARTLV HHHHHHCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ENYAVKVDPALHAEVLARYKKLNLAPYKGFINPVYELVTDKDGNITDVTVSYNEDYVEQM HHCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHH LRYSKDYSPLPSVNN HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA