| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is melR [C]
Identifier: 29347257
GI number: 29347257
Start: 2319519
End: 2319983
Strand: Reverse
Name: melR [C]
Synonym: BT_1847
Alternate gene names: 29347257
Gene position: 2319983-2319519 (Counterclockwise)
Preceding gene: 29347260
Following gene: 29347256
Centisome position: 37.06
GC content: 39.78
Gene sequence:
>465_bases ATGAGTGATTTAGAGAACAAAAAAGCGGAGGAAGCTCCAAAGAAACGTCCCTACAATTTGAGGGAAAAGAAAGAAAAGAA GGCTGCATATCGGTCATTAATCAGACCGGAACTGGCAGACGAGTTGTATGACAAGATTCTGAACATTGTAGTAGTTCAGA AGAAGTATAAAGATCCTGACTATTCAGCTAAAGATTTGGCTAAAGAGTTGAAGACCAATACTCGCTACCTTTCTGCAGTA GTGAATTCTCGTTTTGGTATGAACTACTCTTGTTTGTTGAATGAGTACAGAGTGAAAGACGCTCTGCATTTGTTGACAGA CAAGCGTTATGCCGACAAGAATGTGGAAGAAATCAGTGCAATGGTTGGCTTTGCAAATCGTCAATCTTTTTACGCTGCAT TTTACAAGAACGTAGGTGAAACTCCTAACGGATATCGCAAGAAACACGCTGAAAGTAAGAAGTAA
Upstream 100 bases:
>100_bases AAATAATTGTGTGTTTAAAAAAAAAGTAAGACATTTGTAACATGTAACGTTGCGAATGAGCAATTAATAACAAATAAACA AACCCTAACCAGTTAATTCA
Downstream 100 bases:
>100_bases TTGCGTTTTCCGATACTGACCAAAAGGAATTACCTCTGAATGAAAAGTTCGGGGATAATTCCTTTTCTTATTTAATTAAT CAATATCAGTAATTATGAAA
Product: AraC/XylS family transcriptional regulator
Products: NA
Alternate protein names: Response Regulator; Transcriptional Regulator; Transcriptional Regulator AraC Family
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSDLENKKAEEAPKKRPYNLREKKEKKAAYRSLIRPELADELYDKILNIVVVQKKYKDPDYSAKDLAKELKTNTRYLSAV VNSRFGMNYSCLLNEYRVKDALHLLTDKRYADKNVEEISAMVGFANRQSFYAAFYKNVGETPNGYRKKHAESKK
Sequences:
>Translated_154_residues MSDLENKKAEEAPKKRPYNLREKKEKKAAYRSLIRPELADELYDKILNIVVVQKKYKDPDYSAKDLAKELKTNTRYLSAV VNSRFGMNYSCLLNEYRVKDALHLLTDKRYADKNVEEISAMVGFANRQSFYAAFYKNVGETPNGYRKKHAESKK >Mature_153_residues SDLENKKAEEAPKKRPYNLREKKEKKAAYRSLIRPELADELYDKILNIVVVQKKYKDPDYSAKDLAKELKTNTRYLSAVV NSRFGMNYSCLLNEYRVKDALHLLTDKRYADKNVEEISAMVGFANRQSFYAAFYKNVGETPNGYRKKHAESKK
Specific function: Transcription Activator For The Expression Of The Melab Operon. Melr Binds At Two Sites Located Upstream Of The Melab Transcription Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17969; Mature: 17838
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLENKKAEEAPKKRPYNLREKKEKKAAYRSLIRPELADELYDKILNIVVVQKKYKDPD CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC YSAKDLAKELKTNTRYLSAVVNSRFGMNYSCLLNEYRVKDALHLLTDKRYADKNVEEISA CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH MVGFANRQSFYAAFYKNVGETPNGYRKKHAESKK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC >Mature Secondary Structure SDLENKKAEEAPKKRPYNLREKKEKKAAYRSLIRPELADELYDKILNIVVVQKKYKDPD CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC YSAKDLAKELKTNTRYLSAVVNSRFGMNYSCLLNEYRVKDALHLLTDKRYADKNVEEISA CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH MVGFANRQSFYAAFYKNVGETPNGYRKKHAESKK HHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA