| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347249
Identifier: 29347249
GI number: 29347249
Start: 2309021
End: 2310448
Strand: Reverse
Name: 29347249
Synonym: BT_1839
Alternate gene names: NA
Gene position: 2310448-2309021 (Counterclockwise)
Preceding gene: 29347250
Following gene: 29347243
Centisome position: 36.91
GC content: 43.21
Gene sequence:
>1428_bases ATGAAAAACGACAAACTCCAAAGTAGTATGAAAACAATAAAAAACACGTTTTTTCTAAGCATAGTCTGTGCCGCCAGTGT TGTTTCTTCAGTAGCTCATGAACTCGAAGCAAATGAGAAATACCCCGGGAAGTCGGTGAAGGCACAGACAAGAAAAGAGA TTGTTACGTTCTTTTCTGAATCTCTTTCCGGTAAGACAACCACTTTTGACGCAGGAAAACCGTTGAAACTGTCAGAAGTA GAACACTATCGTGATGTCGTATGGCAGTTGTGGAAAGAGGCAAATGATGGTTTTAAAGAAGAAAAATTAATAGCTTTGGA TACACTCTCATCCGCTTCTACCGGCTACTGGAAACTTCCTGATAGTTTGGAACCCAATGCAGTGATGCCCTATTACTGGG GAATGAAAGGGACAGATGAAATAGGAAATGAACTTCCATTATTCCTCTATCTGCATGGTTCGGGACCCAAAGAGCGGGAA TGGAGTACCGGATTGAATATTTGCCGGAATTTTGATGATGCTCCTTCCGTTTACTTTATACCACAGATTCCGAACGAAGG CGAGTACTATCGTTGGTGGCAGAAAGCTAAACAGTTTGCCTGGGAGAAATTGCTGCGACAATCCTTACTCTTGGGAAAGA TTGATCCCAACAGAGTGTATGTTTTTGGAATCTCGGAAGGCGGATATGGCAGTCAGCGTCTGGCCTCATTTTATGCTGAT TATTGGGCTGCTGCGGGACCGATGGCAGGAGGGGAACCTTTAAAGAATGCTCCTGCGGAGAATTGTAGTAATATTGCTTT TTCTTTGCGGACAGGAGATAAGGATACTGGATTCTACCGGAATACACTGACCGGATATGTACGGGAAGCATTCGATAGTT TGGCGCATCAGCATCCCGGCTATTTCACTCACAAGATAGAACTGATTCCCGGAATGGGGCATAGTATTGATTATCGTCCG ACGACTCCCTGGCTGAAGCAATATGTCCGTAATCCTTATCCCAAATATGTAAGCTGGGAGAATTTTGAAATGGACGGACT CTACCGGAAAGGATTTTATAATCTGTATGTGAAGGAAAGATCCGATGAAGAGGGGAAGTCGCGTACTTATTATGAAATGA GTATTTCGGGAAATCATATTTCATTGAAAGTCGATGATGTTGTTTATGAAGCCACGGAGAAGGATCAACGATGGGGAATA GAGATGAAGTTTGCGAAGAAATATGCGCAGGCGCATAAAGGGAAAGTGGTCATTTATCTCTGCGACGAGCTGGTCGATTT AACTGAAAAGGTGACTCTGACGGTGAATGGCAAAAAGGTTTTCGAGGGAAAAGTAAAGGCTGATTTGAAGAATATGGTTA ATAGCTGTGCGGTGTTCTTCGATCCGCAACGACTTTATCCGGCAGCTATCGAGGTAGAATTAAAATAG
Upstream 100 bases:
>100_bases TAAAAACTTTGGATATTAGTTTTTAGATTAGACTGAAAAGGTAAGGAGAACCGGACAGTAATTTCTATCTTTGTGCATAC ATTAAATCGTTAGCAAATAT
Downstream 100 bases:
>100_bases ATGAGATTGCTCAAAAAAAAGTATCCCCGGTCGTATATCCAAGAATTACTCTTGTGTACGACCGGGGATACGTATTTATC ATAAATTATAAATGGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSESLSGKTTTFDAGKPLKLSEV EHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLPDSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKERE WSTGLNICRNFDDAPSVYFIPQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPGYFTHKIELIPGMGHSIDYRP TTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKERSDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGI EMKFAKKYAQAHKGKVVIYLCDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK
Sequences:
>Translated_475_residues MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSESLSGKTTTFDAGKPLKLSEV EHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLPDSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKERE WSTGLNICRNFDDAPSVYFIPQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPGYFTHKIELIPGMGHSIDYRP TTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKERSDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGI EMKFAKKYAQAHKGKVVIYLCDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK >Mature_475_residues MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSESLSGKTTTFDAGKPLKLSEV EHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLPDSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKERE WSTGLNICRNFDDAPSVYFIPQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPGYFTHKIELIPGMGHSIDYRP TTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKERSDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGI EMKFAKKYAQAHKGKVVIYLCDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54296; Mature: 54296
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH SLSGKTTTFDAGKPLKLSEVEHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLP HCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECC DSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKEREWSTGLNICRNFDDAPSVYFI CCCCCCEECCEECCCCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEE PQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHH YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPG HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC YFTHKIELIPGMGHSIDYRPTTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKER CEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEC SDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGIEMKFAKKYAQAHKGKVVIYL CCCCCCCCEEEEEEECCCEEEEEEHHHEEECCCCHHHCCCCHHHHHHHHHHHCCCEEEEE CDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK CHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHHEEEECCHHCCCEEEEEEEC >Mature Secondary Structure MKNDKLQSSMKTIKNTFFLSIVCAASVVSSVAHELEANEKYPGKSVKAQTRKEIVTFFSE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH SLSGKTTTFDAGKPLKLSEVEHYRDVVWQLWKEANDGFKEEKLIALDTLSSASTGYWKLP HCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECC DSLEPNAVMPYYWGMKGTDEIGNELPLFLYLHGSGPKEREWSTGLNICRNFDDAPSVYFI CCCCCCEECCEECCCCCCHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEE PQIPNEGEYYRWWQKAKQFAWEKLLRQSLLLGKIDPNRVYVFGISEGGYGSQRLASFYAD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHH YWAAAGPMAGGEPLKNAPAENCSNIAFSLRTGDKDTGFYRNTLTGYVREAFDSLAHQHPG HHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC YFTHKIELIPGMGHSIDYRPTTPWLKQYVRNPYPKYVSWENFEMDGLYRKGFYNLYVKER CEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEC SDEEGKSRTYYEMSISGNHISLKVDDVVYEATEKDQRWGIEMKFAKKYAQAHKGKVVIYL CCCCCCCCEEEEEEECCCEEEEEEHHHEEECCCCHHHCCCCHHHHHHHHHHHCCCEEEEE CDELVDLTEKVTLTVNGKKVFEGKVKADLKNMVNSCAVFFDPQRLYPAAIEVELK CHHHHCCCCEEEEEECCCEEECCHHHHHHHHHHHHHEEEECCHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA