| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347196
Identifier: 29347196
GI number: 29347196
Start: 2232996
End: 2234333
Strand: Reverse
Name: 29347196
Synonym: BT_1786
Alternate gene names: NA
Gene position: 2234333-2232996 (Counterclockwise)
Preceding gene: 29347200
Following gene: 29347195
Centisome position: 35.69
GC content: 40.36
Gene sequence:
>1338_bases ATGAGACTATTCATTACACTTTTTTATTCATTACTCTTATTTTGTACAATATTCTCCTGTAGGGATGAATCTTCTTCCAT TGGAAGTAAATGGGTAGAGAGTTCTTTTATAAATGTAGTGACAGATACATGTATGGTGACTCTGAGCACATTATTAGCCG ATTCTCTGGCAACTTCGGGAGATACGATCTGTCAGATCGGGCGATTTAAGGATGATCTTTACGGAGAAATAAAAACTTCG TTTTATGCAGAATATCAAGTACCTTCTCATTCACTTAATGAGACTACTGACTATCAGTTTGACTCTATCACGTTCAAATG GTATACTTCCGGGGATTATCTGGGGGATACACTGGTCTATCATCGTATTGACTTATATAGTTTATCGCAAGGACTCTCTC TGGAAGATAACGGTTACCTGTTTAATAAGACCAACGTTAGCTATAATCAGAATAATCATCTTGGTTCTGTTTCTATACGT CCTACACCCGGCTATCGGAACGAGTTACATGAAACGCGCCTGCCTGACGAATGGGGAAAGAAGTGGTTTAATTTAATGCT GGAAGATGATGAATGTATGGAGTCTCAGGATCGTTTCCGGGCTTTCTTCAAAGGAATAGCTTTTATTCCCGATGAAAACG GGACGTGCATTAACGGCTTTCAGGTGAACGATTCGAGTTTTTGTATTACCCTTTATTATCATGAACTGAAAGAGAAGCCT ACGGAACAGACCTTAGTGTTCAATGCCAGCACTTCACTGAACTACACCAAGGTGGAACATGACCGTACTAATACTCCTTT GGAGAATCTCAAGGCAGGAACAGATTATGAACTGCCTTCTTCCGAGAGCGAACATCAGGTGTATCTGCAAGGGCTGACCG GTATGTATATCAATGTCGAATTTCCCTATCTGAATAATCTGAATCAGACCGGAAGGCTTGTTTCCATTGAAAGTGCAGTA CTCAAGCTATATCCTATCAAAGGTACGTATAACGGAAAGTATCCATTACCGAAATCGTTGTCTCTTTATACGGCAGACCA GAATAACGCCACTCAGAGTGTCATTACTGACATCTCGGGAAATACCGTACAAACGGGAAGCCTGGTGGAAGATAATGTCT ATTATGAAGATACTCACTATTCGTTTGATATCACCTCGTTTATTCAGAATAATCTGGGGACAGCGGGGGAGAGCCGTGAG AAACTGCAAATATTCCTCTCTGACAATGCTTTTTATAATACCGTTCAGGGAGTGGTGCTGGGAGATAGCAAACACCCTGT GAATGACCATGATAATAATGTATCACTCACTATTTATTATAAGACATATACGAAATGA
Upstream 100 bases:
>100_bases ATCGAACAAAACCGAGTCTATAAATAGCGGGAAATAGTCGATTAATTTTGGGGATGCTTTCCTAAAGGGGTTCCTTTGCA ACTCAAAAATAATATTCATT
Downstream 100 bases:
>100_bases AAAGAAGAGTTTTATCTATCCTTATACTAGGTGCGAACTTATTGAATGTAGCTGCCCAAAATATGACGAGTTCTCCGGTT TCCATGTTCGGACTCGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSGDTICQIGRFKDDLYGEIKTS FYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVYHRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIR PTPGYRNELHETRLPDEWGKKWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVEFPYLNNLNQTGRLVSIESAV LKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISGNTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESRE KLQIFLSDNAFYNTVQGVVLGDSKHPVNDHDNNVSLTIYYKTYTK
Sequences:
>Translated_445_residues MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSGDTICQIGRFKDDLYGEIKTS FYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVYHRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIR PTPGYRNELHETRLPDEWGKKWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVEFPYLNNLNQTGRLVSIESAV LKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISGNTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESRE KLQIFLSDNAFYNTVQGVVLGDSKHPVNDHDNNVSLTIYYKTYTK >Mature_445_residues MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSGDTICQIGRFKDDLYGEIKTS FYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVYHRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIR PTPGYRNELHETRLPDEWGKKWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVEFPYLNNLNQTGRLVSIESAV LKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISGNTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESRE KLQIFLSDNAFYNTVQGVVLGDSKHPVNDHDNNVSLTIYYKTYTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50674; Mature: 50674
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSG CEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DTICQIGRFKDDLYGEIKTSFYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVY CCEEEECCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCEECEEEEEEEECCCCCCCEEEE HRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIRPTPGYRNELHETRLPDEWGK EEEEHEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHH KWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP HHHEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCEEEEEEEEHHHCCC TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVE CCCEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCEEEEEEE FPYLNNLNQTGRLVSIESAVLKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISG CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHEECCC NTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESREKLQIFLSDNAFYNTVQGVVL CEEECCCEEECCEEEECCCEEEEHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEE GDSKHPVNDHDNNVSLTIYYKTYTK CCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSG CEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DTICQIGRFKDDLYGEIKTSFYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVY CCEEEECCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCEECEEEEEEEECCCCCCCEEEE HRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIRPTPGYRNELHETRLPDEWGK EEEEHEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHH KWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP HHHEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCEEEEEEEEHHHCCC TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVE CCCEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCEEEEEEE FPYLNNLNQTGRLVSIESAVLKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISG CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHEECCC NTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESREKLQIFLSDNAFYNTVQGVVL CEEECCCEEECCEEEECCCEEEEHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEE GDSKHPVNDHDNNVSLTIYYKTYTK CCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA