| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347200
Identifier: 29347200
GI number: 29347200
Start: 2237705
End: 2238013
Strand: Reverse
Name: 29347200
Synonym: BT_1790
Alternate gene names: NA
Gene position: 2238013-2237705 (Counterclockwise)
Preceding gene: 29347201
Following gene: 29347196
Centisome position: 35.75
GC content: 40.78
Gene sequence:
>309_bases ATGGGGAATTTAATTTCATTTATGAAGGGAGTAGCCGATGGGCTACGGGAAAGTGGGAATTATGGGACCGCCCATATTTA CAGGAGTAGCTTGAATGCCTGGCTTGCATTCCATGGGAGTGATAATCTTCCTTTTCGGAGGATGCAGGATTTTCTTCTGG CTATAGATGCATATTCTGCTGCTTGTACGGATAAGCCAGTGGAACAGATAAAATCCGGATTCTCGGAATTACTAAAGAGA TATATCGAGATGAATAATGACAATGTAATTGGTACTTATATTCAGACAGTTTACCGGTCATCACTATAA
Upstream 100 bases:
>100_bases GGCAATGGAAAGCGAAAGGCTCTGTTTCAAGAGGAATTTTGGGAAAAGGGAATAACTTCTTGGGAACCACCTTTTAAAGT ATTATTTAAATCAATAGACG
Downstream 100 bases:
>100_bases TACGAAAAATATTCTTTTTCATTTCTATAACAAATAAGATATACGAATACAGAGATAATTAAATAAACAAGAGCTCAATC ATAATAATCCTTCTCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MGNLISFMKGVADGLRESGNYGTAHIYRSSLNAWLAFHGSDNLPFRRMQDFLLAIDAYSAACTDKPVEQIKSGFSELLKR YIEMNNDNVIGTYIQTVYRSSL
Sequences:
>Translated_102_residues MGNLISFMKGVADGLRESGNYGTAHIYRSSLNAWLAFHGSDNLPFRRMQDFLLAIDAYSAACTDKPVEQIKSGFSELLKR YIEMNNDNVIGTYIQTVYRSSL >Mature_101_residues GNLISFMKGVADGLRESGNYGTAHIYRSSLNAWLAFHGSDNLPFRRMQDFLLAIDAYSAACTDKPVEQIKSGFSELLKRY IEMNNDNVIGTYIQTVYRSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11476; Mature: 11345
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLISFMKGVADGLRESGNYGTAHIYRSSLNAWLAFHGSDNLPFRRMQDFLLAIDAYSA CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHH ACTDKPVEQIKSGFSELLKRYIEMNNDNVIGTYIQTVYRSSL HCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure GNLISFMKGVADGLRESGNYGTAHIYRSSLNAWLAFHGSDNLPFRRMQDFLLAIDAYSA CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHH ACTDKPVEQIKSGFSELLKRYIEMNNDNVIGTYIQTVYRSSL HCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA