| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347195
Identifier: 29347195
GI number: 29347195
Start: 2231794
End: 2232999
Strand: Reverse
Name: 29347195
Synonym: BT_1785
Alternate gene names: NA
Gene position: 2232999-2231794 (Counterclockwise)
Preceding gene: 29347196
Following gene: 29347193
Centisome position: 35.67
GC content: 43.03
Gene sequence:
>1206_bases ATGAAAAGAAGAGTTTTATCTATCCTTATACTAGGTGCGAACTTATTGAATGTAGCTGCCCAAAATATGACGAGTTCTCC GGTTTCCATGTTCGGACTCGGTGAATTGTCCACCGGAGAAGGCGGAATTTATTCCGGTTTGGGTGGAGTCGGCATTGCAT TGCGTGGAGAAAATGTGATTAATAGTGCCAATCCGGCTTCTTTAACGGGATTATTGCCGCAGTATTTCTTTTTCGATTTG GGTGTCAGCGGGTCTTATCTGAAATATTCACAGTCAGGAGCGAGCAATCATTCTCTGAATGGTAATCTTAATAATTTGGC TGTTGGATTCCGTATAGCCCCCCGTTGGTATGGAGCTATTTTTATGGCTCCTGTCAGTAGTGTAGGGTATGCCATCTCGC TCGATCAGGATGTGGCGGGTACGGACGGAAGTACGGTGACTTCACTTTTCCAAGGTGAGGGAGGGTTATCCAAAATGGGT ATCAGCGTTGCGCACGAACTGTGGAAAGGGCTTTCACTGGGTGCAAACTTTTCTTATGTGGGAGGAAGTATTTCACAAAC AGAAACTCAAGGGAGTGCAACAGAAAGTAATAGTTCGCATAAACATACGATTTATGCCGATTTCGGATTACAGTATACCT ATAAGTTGGATCATTACCGTTCGGCGGTAGCAGGAGTCGTATATGGATATTCTCAAGACTTGATGCAGGATAATGATCAT GTGGTGAGCAGTAGCAGTTCCAGCGGAAGCATTGAAGAAAAAGGAAAAAAGTATCGTACTTGTTTGCCGCAGTTTATCGG ATTCGGAGCGTCTTATACTACGTTGCGCTGGATGGCTTCCATCGACTATAAATTTGTTGACTGGAGCCGGCTGGAGTCTT CGCATTCCAGTATAAGTTTTCGTAATCAACATCGTTTGATGTTGGGAGGCAGCTATACATTGGGGAACCCTTATAGTAAA CCGGTACGCTTATTGCTTGGAGCAGGTATGGGCAACTCATATATTTCAGTGCATGATAAGACGACAACGAATTATTATCT GAGTACCGGACTTAATTTTGAGTTTCGTAGCCGCAGTACGCTTTCTTTAGGAGTGAAATATACAGATCAACTGAAGGTGA ATTCGGGGAGATTTAAAGAGCAGAAACTTTCTTTTTTTCTGAATCTGACTTTCTCGGAAAAGACTTATAAGGCAAAATTG AAGTAA
Upstream 100 bases:
>100_bases ATAATACCGTTCAGGGAGTGGTGCTGGGAGATAGCAAACACCCTGTGAATGACCATGATAATAATGTATCACTCACTATT TATTATAAGACATATACGAA
Downstream 100 bases:
>100_bases CTGGCGGGGTGTTTTCTTTATCTGGCGGATAGGGAGAGCATTTATAATATAGAAAAGGGTACCCTCAGCGGTACCCTTTT CTATTATTTATTGCCTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKRRVLSILILGANLLNVAAQNMTSSPVSMFGLGELSTGEGGIYSGLGGVGIALRGENVINSANPASLTGLLPQYFFFDL GVSGSYLKYSQSGASNHSLNGNLNNLAVGFRIAPRWYGAIFMAPVSSVGYAISLDQDVAGTDGSTVTSLFQGEGGLSKMG ISVAHELWKGLSLGANFSYVGGSISQTETQGSATESNSSHKHTIYADFGLQYTYKLDHYRSAVAGVVYGYSQDLMQDNDH VVSSSSSSGSIEEKGKKYRTCLPQFIGFGASYTTLRWMASIDYKFVDWSRLESSHSSISFRNQHRLMLGGSYTLGNPYSK PVRLLLGAGMGNSYISVHDKTTTNYYLSTGLNFEFRSRSTLSLGVKYTDQLKVNSGRFKEQKLSFFLNLTFSEKTYKAKL K
Sequences:
>Translated_401_residues MKRRVLSILILGANLLNVAAQNMTSSPVSMFGLGELSTGEGGIYSGLGGVGIALRGENVINSANPASLTGLLPQYFFFDL GVSGSYLKYSQSGASNHSLNGNLNNLAVGFRIAPRWYGAIFMAPVSSVGYAISLDQDVAGTDGSTVTSLFQGEGGLSKMG ISVAHELWKGLSLGANFSYVGGSISQTETQGSATESNSSHKHTIYADFGLQYTYKLDHYRSAVAGVVYGYSQDLMQDNDH VVSSSSSSGSIEEKGKKYRTCLPQFIGFGASYTTLRWMASIDYKFVDWSRLESSHSSISFRNQHRLMLGGSYTLGNPYSK PVRLLLGAGMGNSYISVHDKTTTNYYLSTGLNFEFRSRSTLSLGVKYTDQLKVNSGRFKEQKLSFFLNLTFSEKTYKAKL K >Mature_401_residues MKRRVLSILILGANLLNVAAQNMTSSPVSMFGLGELSTGEGGIYSGLGGVGIALRGENVINSANPASLTGLLPQYFFFDL GVSGSYLKYSQSGASNHSLNGNLNNLAVGFRIAPRWYGAIFMAPVSSVGYAISLDQDVAGTDGSTVTSLFQGEGGLSKMG ISVAHELWKGLSLGANFSYVGGSISQTETQGSATESNSSHKHTIYADFGLQYTYKLDHYRSAVAGVVYGYSQDLMQDNDH VVSSSSSSGSIEEKGKKYRTCLPQFIGFGASYTTLRWMASIDYKFVDWSRLESSHSSISFRNQHRLMLGGSYTLGNPYSK PVRLLLGAGMGNSYISVHDKTTTNYYLSTGLNFEFRSRSTLSLGVKYTDQLKVNSGRFKEQKLSFFLNLTFSEKTYKAKL K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43496; Mature: 43496
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRVLSILILGANLLNVAAQNMTSSPVSMFGLGELSTGEGGIYSGLGGVGIALRGENVI CCCCEEEEEEECHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEECCCCCEEEEEECCCCC NSANPASLTGLLPQYFFFDLGVSGSYLKYSQSGASNHSLNGNLNNLAVGFRIAPRWYGAI CCCCCCHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHCEE FMAPVSSVGYAISLDQDVAGTDGSTVTSLFQGEGGLSKMGISVAHELWKGLSLGANFSYV EEEEHHHCCEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC GGSISQTETQGSATESNSSHKHTIYADFGLQYTYKLDHYRSAVAGVVYGYSQDLMQDNDH CCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHHHCCCHHHHCCCCC VVSSSSSSGSIEEKGKKYRTCLPQFIGFGASYTTLRWMASIDYKFVDWSRLESSHSSISF EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCEEEECHHHHHCCCCCEEE RNQHRLMLGGSYTLGNPYSKPVRLLLGAGMGNSYISVHDKTTTNYYLSTGLNFEFRSRST CCCEEEEEECCEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEECCCCE LSLGVKYTDQLKVNSGRFKEQKLSFFLNLTFSEKTYKAKLK EEEEEEEEEEEEECCCCCHHEEEEEEEEEEECCCEEEEECC >Mature Secondary Structure MKRRVLSILILGANLLNVAAQNMTSSPVSMFGLGELSTGEGGIYSGLGGVGIALRGENVI CCCCEEEEEEECHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEECCCCCEEEEEECCCCC NSANPASLTGLLPQYFFFDLGVSGSYLKYSQSGASNHSLNGNLNNLAVGFRIAPRWYGAI CCCCCCHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCHHHCEE FMAPVSSVGYAISLDQDVAGTDGSTVTSLFQGEGGLSKMGISVAHELWKGLSLGANFSYV EEEEHHHCCEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC GGSISQTETQGSATESNSSHKHTIYADFGLQYTYKLDHYRSAVAGVVYGYSQDLMQDNDH CCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHHHHHHHHHCCCHHHHCCCCC VVSSSSSSGSIEEKGKKYRTCLPQFIGFGASYTTLRWMASIDYKFVDWSRLESSHSSISF EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCEEEECHHHHHCCCCCEEE RNQHRLMLGGSYTLGNPYSKPVRLLLGAGMGNSYISVHDKTTTNYYLSTGLNFEFRSRST CCCEEEEEECCEECCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCEEECCCCE LSLGVKYTDQLKVNSGRFKEQKLSFFLNLTFSEKTYKAKLK EEEEEEEEEEEEECCCCCHHEEEEEEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA