Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347196

Identifier: 29347196

GI number: 29347196

Start: 2232996

End: 2234333

Strand: Reverse

Name: 29347196

Synonym: BT_1786

Alternate gene names: NA

Gene position: 2234333-2232996 (Counterclockwise)

Preceding gene: 29347200

Following gene: 29347195

Centisome position: 35.69

GC content: 40.36

Gene sequence:

>1338_bases
ATGAGACTATTCATTACACTTTTTTATTCATTACTCTTATTTTGTACAATATTCTCCTGTAGGGATGAATCTTCTTCCAT
TGGAAGTAAATGGGTAGAGAGTTCTTTTATAAATGTAGTGACAGATACATGTATGGTGACTCTGAGCACATTATTAGCCG
ATTCTCTGGCAACTTCGGGAGATACGATCTGTCAGATCGGGCGATTTAAGGATGATCTTTACGGAGAAATAAAAACTTCG
TTTTATGCAGAATATCAAGTACCTTCTCATTCACTTAATGAGACTACTGACTATCAGTTTGACTCTATCACGTTCAAATG
GTATACTTCCGGGGATTATCTGGGGGATACACTGGTCTATCATCGTATTGACTTATATAGTTTATCGCAAGGACTCTCTC
TGGAAGATAACGGTTACCTGTTTAATAAGACCAACGTTAGCTATAATCAGAATAATCATCTTGGTTCTGTTTCTATACGT
CCTACACCCGGCTATCGGAACGAGTTACATGAAACGCGCCTGCCTGACGAATGGGGAAAGAAGTGGTTTAATTTAATGCT
GGAAGATGATGAATGTATGGAGTCTCAGGATCGTTTCCGGGCTTTCTTCAAAGGAATAGCTTTTATTCCCGATGAAAACG
GGACGTGCATTAACGGCTTTCAGGTGAACGATTCGAGTTTTTGTATTACCCTTTATTATCATGAACTGAAAGAGAAGCCT
ACGGAACAGACCTTAGTGTTCAATGCCAGCACTTCACTGAACTACACCAAGGTGGAACATGACCGTACTAATACTCCTTT
GGAGAATCTCAAGGCAGGAACAGATTATGAACTGCCTTCTTCCGAGAGCGAACATCAGGTGTATCTGCAAGGGCTGACCG
GTATGTATATCAATGTCGAATTTCCCTATCTGAATAATCTGAATCAGACCGGAAGGCTTGTTTCCATTGAAAGTGCAGTA
CTCAAGCTATATCCTATCAAAGGTACGTATAACGGAAAGTATCCATTACCGAAATCGTTGTCTCTTTATACGGCAGACCA
GAATAACGCCACTCAGAGTGTCATTACTGACATCTCGGGAAATACCGTACAAACGGGAAGCCTGGTGGAAGATAATGTCT
ATTATGAAGATACTCACTATTCGTTTGATATCACCTCGTTTATTCAGAATAATCTGGGGACAGCGGGGGAGAGCCGTGAG
AAACTGCAAATATTCCTCTCTGACAATGCTTTTTATAATACCGTTCAGGGAGTGGTGCTGGGAGATAGCAAACACCCTGT
GAATGACCATGATAATAATGTATCACTCACTATTTATTATAAGACATATACGAAATGA

Upstream 100 bases:

>100_bases
ATCGAACAAAACCGAGTCTATAAATAGCGGGAAATAGTCGATTAATTTTGGGGATGCTTTCCTAAAGGGGTTCCTTTGCA
ACTCAAAAATAATATTCATT

Downstream 100 bases:

>100_bases
AAAGAAGAGTTTTATCTATCCTTATACTAGGTGCGAACTTATTGAATGTAGCTGCCCAAAATATGACGAGTTCTCCGGTT
TCCATGTTCGGACTCGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSGDTICQIGRFKDDLYGEIKTS
FYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVYHRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIR
PTPGYRNELHETRLPDEWGKKWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP
TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVEFPYLNNLNQTGRLVSIESAV
LKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISGNTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESRE
KLQIFLSDNAFYNTVQGVVLGDSKHPVNDHDNNVSLTIYYKTYTK

Sequences:

>Translated_445_residues
MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSGDTICQIGRFKDDLYGEIKTS
FYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVYHRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIR
PTPGYRNELHETRLPDEWGKKWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP
TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVEFPYLNNLNQTGRLVSIESAV
LKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISGNTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESRE
KLQIFLSDNAFYNTVQGVVLGDSKHPVNDHDNNVSLTIYYKTYTK
>Mature_445_residues
MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSGDTICQIGRFKDDLYGEIKTS
FYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVYHRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIR
PTPGYRNELHETRLPDEWGKKWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP
TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVEFPYLNNLNQTGRLVSIESAV
LKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISGNTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESRE
KLQIFLSDNAFYNTVQGVVLGDSKHPVNDHDNNVSLTIYYKTYTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50674; Mature: 50674

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSG
CEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTICQIGRFKDDLYGEIKTSFYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVY
CCEEEECCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCEECEEEEEEEECCCCCCCEEEE
HRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIRPTPGYRNELHETRLPDEWGK
EEEEHEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHH
KWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP
HHHEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCEEEEEEEEHHHCCC
TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVE
CCCEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCEEEEEEE
FPYLNNLNQTGRLVSIESAVLKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISG
CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHEECCC
NTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESREKLQIFLSDNAFYNTVQGVVL
CEEECCCEEECCEEEECCCEEEEHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEE
GDSKHPVNDHDNNVSLTIYYKTYTK
CCCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MRLFITLFYSLLLFCTIFSCRDESSSIGSKWVESSFINVVTDTCMVTLSTLLADSLATSG
CEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTICQIGRFKDDLYGEIKTSFYAEYQVPSHSLNETTDYQFDSITFKWYTSGDYLGDTLVY
CCEEEECCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCEECEEEEEEEECCCCCCCEEEE
HRIDLYSLSQGLSLEDNGYLFNKTNVSYNQNNHLGSVSIRPTPGYRNELHETRLPDEWGK
EEEEHEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCHHHHH
KWFNLMLEDDECMESQDRFRAFFKGIAFIPDENGTCINGFQVNDSSFCITLYYHELKEKP
HHHEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCEEEEEEEEHHHCCC
TEQTLVFNASTSLNYTKVEHDRTNTPLENLKAGTDYELPSSESEHQVYLQGLTGMYINVE
CCCEEEEECCCCCEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCEEEEEEE
FPYLNNLNQTGRLVSIESAVLKLYPIKGTYNGKYPLPKSLSLYTADQNNATQSVITDISG
CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHEECCC
NTVQTGSLVEDNVYYEDTHYSFDITSFIQNNLGTAGESREKLQIFLSDNAFYNTVQGVVL
CEEECCCEEECCEEEECCCEEEEHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEE
GDSKHPVNDHDNNVSLTIYYKTYTK
CCCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA