| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347150
Identifier: 29347150
GI number: 29347150
Start: 2147175
End: 2147660
Strand: Reverse
Name: 29347150
Synonym: BT_1740
Alternate gene names: NA
Gene position: 2147660-2147175 (Counterclockwise)
Preceding gene: 29347151
Following gene: 29347148
Centisome position: 34.31
GC content: 46.71
Gene sequence:
>486_bases ATGAAGAAATTAGCTTTAGCTATTTGTCTGCTGGTGGTATCAATAGCTGCCCAGGCACAATTTGAGAAAGGAAAAATGAT TCTTAATCCTTCTGTAACGGGATTGGATTTTTCGTATAGTAAAAACGATAAGGCGAAGTTTGGTATTGGTGCGCAAGCCG GTACATTCCTTGCCGACGGTATCGCATTGATGGTTAATGTCGGTGCTGATTGGTCAAAACCCGTAGACGAATACACATTA GGAACAGGAATGCGTTTCTACTTTAATTCCACCGGTGTTTATCTGGGCGGAGGTCTCGACTGGAACCGCTTCCGTTGGAG CGGAGGACATCACCAGACTGACTGGGGGCTAGGCATCGAAGCCGGATACGCTTACTTCCTTTCCCGCACCGTAACCATCG AACCCGCCGTATATTACAAATGGCGCTTCAACGATAGCGACATGTCACGTTTCGGCGTTAAGGTCGGATTCGGATTCTAC TTTTAA
Upstream 100 bases:
>100_bases GTCATCGTACTCTTGCTTTGGCTCGTGCTCCGGAAGAAGGAACAAATGCGTGAACGCCGTAAAAAAGACGAACAATCTAT TCACTTAAAAAAGTAAATTT
Downstream 100 bases:
>100_bases CAATGGATAATGGATAATTGAAAATGGATAATGAGCTGCGCTGTTTACTGCATAGCCATTATCCATTATTCATTAAGCAA GCTTTTCTTTCAGAAACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKKLALAICLLVVSIAAQAQFEKGKMILNPSVTGLDFSYSKNDKAKFGIGAQAGTFLADGIALMVNVGADWSKPVDEYTL GTGMRFYFNSTGVYLGGGLDWNRFRWSGGHHQTDWGLGIEAGYAYFLSRTVTIEPAVYYKWRFNDSDMSRFGVKVGFGFY F
Sequences:
>Translated_161_residues MKKLALAICLLVVSIAAQAQFEKGKMILNPSVTGLDFSYSKNDKAKFGIGAQAGTFLADGIALMVNVGADWSKPVDEYTL GTGMRFYFNSTGVYLGGGLDWNRFRWSGGHHQTDWGLGIEAGYAYFLSRTVTIEPAVYYKWRFNDSDMSRFGVKVGFGFY F >Mature_161_residues MKKLALAICLLVVSIAAQAQFEKGKMILNPSVTGLDFSYSKNDKAKFGIGAQAGTFLADGIALMVNVGADWSKPVDEYTL GTGMRFYFNSTGVYLGGGLDWNRFRWSGGHHQTDWGLGIEAGYAYFLSRTVTIEPAVYYKWRFNDSDMSRFGVKVGFGFY F
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17851; Mature: 17851
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLALAICLLVVSIAAQAQFEKGKMILNPSVTGLDFSYSKNDKAKFGIGAQAGTFLADG CHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCEECCCCCCCHHHHCC IALMVNVGADWSKPVDEYTLGTGMRFYFNSTGVYLGGGLDWNRFRWSGGHHQTDWGLGIE EEEEEECCCCCCCCCCCEECCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCHH AGYAYFLSRTVTIEPAVYYKWRFNDSDMSRFGVKVGFGFYF HHHEEEEEEEEEECCEEEEEEEECCCCHHHCEEEEEEEECC >Mature Secondary Structure MKKLALAICLLVVSIAAQAQFEKGKMILNPSVTGLDFSYSKNDKAKFGIGAQAGTFLADG CHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEECCCCCCCEECCCCCCCHHHHCC IALMVNVGADWSKPVDEYTLGTGMRFYFNSTGVYLGGGLDWNRFRWSGGHHQTDWGLGIE EEEEEECCCCCCCCCCCEECCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCCCHH AGYAYFLSRTVTIEPAVYYKWRFNDSDMSRFGVKVGFGFYF HHHEEEEEEEEEECCEEEEEEEECCCCHHHCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA