| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is luxQ [H]
Identifier: 29347148
GI number: 29347148
Start: 2142214
End: 2144133
Strand: Reverse
Name: luxQ [H]
Synonym: BT_1738
Alternate gene names: 29347148
Gene position: 2144133-2142214 (Counterclockwise)
Preceding gene: 29347150
Following gene: 29347147
Centisome position: 34.25
GC content: 44.27
Gene sequence:
>1920_bases ATGGTTATTAGCTTATTCATTCTGTGTTTTGCATCTACTTTAGCCTTTAGTAGCACAAACAAAGAAAAACAGTTGGAAGC CCTTTCCGACAGTGTCTCAAATAAAATAGGTCAGAAAGATTTTATACCTTTCTATCAGGAATATATGCGATTGGCAAGGC AGCAGAATGATACTGCTAAAATCGACGATGCTTATTCTCAGATTGCTTCCCATTATTACCGGTTGAGAAATACGGATAGC CTGAAAGTGGTTGCATATGAATATATGGACTGGTGCCTGAAGCGTGGTAATATCAATAATCGCTATACGCAGTGGCGCCA GTATATTCAGTTGCTTACCGAGAAAGGTTTGCAGGATGAGGCCATGCGTGAGACTGGACTTCTTCAGAAGGATGCGGATG CGGCCAAAAGTGCTTTCGGAATGGCTTGCAGCGAGATGTGTATCGGATATAATCATCGGGTGTTCAGCAACAACGTCAAG CTCTGTCTTGAATACTATTCTTCCGCACTGAAAAAATTTAGTGATGCGGGTTTTTATGAAGATGCCTATGTGGTGTCACT GAATATCATCCAGACTTATCTGGCTAGAGGGGAGTATGCCAATGCGATGGAATACTTGAACCGTATGCCGGGACTGATTG AGAAAATGAAGCGTAAGGATATCCCTGTCCGACCGGAGCTTACCATGCGTTATTATCAGTTTCAAGTGATTGCTACGCTG GCATTGAAAGGGAAGAAGGAGGCGCAACCGTTTATTGCAGAAGCGGATAAGTTTTATCACGAAAATATGAATGCTTTTCC CCGTGAAGGATGGTTGGGATATAAAATTCTTTGTGCGCGGACGTTGAATGACAATCAGATGGCACTCAACTATCTGGACT CATTGATGGATTATCATCATTCGGTGGGGAGCTGTTATCCTGCCAATCACCTGTTGAAAGCCCAGTTTATGGAGCAGATG GGACGCTTTGAAGATGCCTGCGAGGTTTATAAATCTTATGCGCATATTAATGATTCCATTCGTTCGGCAGAGCTGGACGA GCAATTAAGCAAATATACTGTGCAATTCGAAGTGGACAAGCTGGAGCACGATAAGCTGGAATTGCGGGCGGAGGTCAACC GCAATCTCTTTATAACTTCCGTGATTGTCGGATGCCTGGTGTTGATATTGTTGATTGTTATCACGTTCTACTATATGCGC TCCTTGTCGTTGAACCGGAAACTGGATGCGGCAAATAAGGCCGTTATCAAGGCCAGCCATATGAAAAGCTCTTTTATCCA GCATATCACACATGAAATCCGTACTCCGCTCAATTCGATTATCGGTTTTTCATCCTTGATGGCTGCCGGTGGGCTGACAC AGGAAGAGATGGAAGAATATGCCCGTCAGATGGAGAGCAGCAACGCATATCTGCTTGATTTGGTAAATAATGTGATTGAT ATAGCCGACATGGACTCTCAGACGGATGATATACCGAAGAAGCCAGTGAGTGTAGATGCGTGTTGTCAGGAATGTTTAGG ATTGATTCGTCAGAATCTGAAAGAAGGAATCAAGTTGCAATATATGCCTTCTTCCACTCCGGTCGAAGTGTGTACGGTTG AAATCTGGATGAAGCGTGTGCTACTCGGTTTGCTGAACAATGCCAATAAATTCACGGAAACCGGATTTATACGTCTGAGT TATGAAGAAGACAAACCGAATCGTCTGGTACGTTTCATTATCGAAGATTCCGGTCCCGGAATTGAAGAGCACTTTCGGGA TGCGATTTTCGAACGCTTTGCAAAGGCGGATACCTTCACTCAGGGCACCGGGCTGGGATTGTCTATTATCCGTCAGATCA TGGAATTAGTGGATGGAAATGTCTATCTGGACACCAGCTACGCGGGTGGTGCAAGATTTGTTGTCGAATGGCCTCAATAA
Upstream 100 bases:
>100_bases AAAGAAATTGCTTCGGGATAATTGGCGTATCTTGGTCCGGAATTTACAACAAACATTTCAAAATAATAACAAATTGACTT GAATCGTGAAAAACATCCGG
Downstream 100 bases:
>100_bases TAGTTGGAGATAGTATCTGCATCTATTATCTTTGCACCACATTATTTTATGACTCAAGAACATTATGAATCTGAAAAACT ATCTTTTCTTATTAGTTCTG
Product: two-component system sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 639; Mature: 639
Protein sequence:
>639_residues MVISLFILCFASTLAFSSTNKEKQLEALSDSVSNKIGQKDFIPFYQEYMRLARQQNDTAKIDDAYSQIASHYYRLRNTDS LKVVAYEYMDWCLKRGNINNRYTQWRQYIQLLTEKGLQDEAMRETGLLQKDADAAKSAFGMACSEMCIGYNHRVFSNNVK LCLEYYSSALKKFSDAGFYEDAYVVSLNIIQTYLARGEYANAMEYLNRMPGLIEKMKRKDIPVRPELTMRYYQFQVIATL ALKGKKEAQPFIAEADKFYHENMNAFPREGWLGYKILCARTLNDNQMALNYLDSLMDYHHSVGSCYPANHLLKAQFMEQM GRFEDACEVYKSYAHINDSIRSAELDEQLSKYTVQFEVDKLEHDKLELRAEVNRNLFITSVIVGCLVLILLIVITFYYMR SLSLNRKLDAANKAVIKASHMKSSFIQHITHEIRTPLNSIIGFSSLMAAGGLTQEEMEEYARQMESSNAYLLDLVNNVID IADMDSQTDDIPKKPVSVDACCQECLGLIRQNLKEGIKLQYMPSSTPVEVCTVEIWMKRVLLGLLNNANKFTETGFIRLS YEEDKPNRLVRFIIEDSGPGIEEHFRDAIFERFAKADTFTQGTGLGLSIIRQIMELVDGNVYLDTSYAGGARFVVEWPQ
Sequences:
>Translated_639_residues MVISLFILCFASTLAFSSTNKEKQLEALSDSVSNKIGQKDFIPFYQEYMRLARQQNDTAKIDDAYSQIASHYYRLRNTDS LKVVAYEYMDWCLKRGNINNRYTQWRQYIQLLTEKGLQDEAMRETGLLQKDADAAKSAFGMACSEMCIGYNHRVFSNNVK LCLEYYSSALKKFSDAGFYEDAYVVSLNIIQTYLARGEYANAMEYLNRMPGLIEKMKRKDIPVRPELTMRYYQFQVIATL ALKGKKEAQPFIAEADKFYHENMNAFPREGWLGYKILCARTLNDNQMALNYLDSLMDYHHSVGSCYPANHLLKAQFMEQM GRFEDACEVYKSYAHINDSIRSAELDEQLSKYTVQFEVDKLEHDKLELRAEVNRNLFITSVIVGCLVLILLIVITFYYMR SLSLNRKLDAANKAVIKASHMKSSFIQHITHEIRTPLNSIIGFSSLMAAGGLTQEEMEEYARQMESSNAYLLDLVNNVID IADMDSQTDDIPKKPVSVDACCQECLGLIRQNLKEGIKLQYMPSSTPVEVCTVEIWMKRVLLGLLNNANKFTETGFIRLS YEEDKPNRLVRFIIEDSGPGIEEHFRDAIFERFAKADTFTQGTGLGLSIIRQIMELVDGNVYLDTSYAGGARFVVEWPQ >Mature_639_residues MVISLFILCFASTLAFSSTNKEKQLEALSDSVSNKIGQKDFIPFYQEYMRLARQQNDTAKIDDAYSQIASHYYRLRNTDS LKVVAYEYMDWCLKRGNINNRYTQWRQYIQLLTEKGLQDEAMRETGLLQKDADAAKSAFGMACSEMCIGYNHRVFSNNVK LCLEYYSSALKKFSDAGFYEDAYVVSLNIIQTYLARGEYANAMEYLNRMPGLIEKMKRKDIPVRPELTMRYYQFQVIATL ALKGKKEAQPFIAEADKFYHENMNAFPREGWLGYKILCARTLNDNQMALNYLDSLMDYHHSVGSCYPANHLLKAQFMEQM GRFEDACEVYKSYAHINDSIRSAELDEQLSKYTVQFEVDKLEHDKLELRAEVNRNLFITSVIVGCLVLILLIVITFYYMR SLSLNRKLDAANKAVIKASHMKSSFIQHITHEIRTPLNSIIGFSSLMAAGGLTQEEMEEYARQMESSNAYLLDLVNNVID IADMDSQTDDIPKKPVSVDACCQECLGLIRQNLKEGIKLQYMPSSTPVEVCTVEIWMKRVLLGLLNNANKFTETGFIRLS YEEDKPNRLVRFIIEDSGPGIEEHFRDAIFERFAKADTFTQGTGLGLSIIRQIMELVDGNVYLDTSYAGGARFVVEWPQ
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=231, Percent_Identity=29.004329004329, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1788713, Length=236, Percent_Identity=30.0847457627119, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1789149, Length=238, Percent_Identity=28.1512605042017, Blast_Score=97, Evalue=5e-21, Organism=Escherichia coli, GI145693157, Length=236, Percent_Identity=28.8135593220339, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI87081816, Length=226, Percent_Identity=27.8761061946903, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1786912, Length=258, Percent_Identity=25.968992248062, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788393, Length=228, Percent_Identity=26.7543859649123, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787894, Length=232, Percent_Identity=28.8793103448276, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790436, Length=268, Percent_Identity=25.7462686567164, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786783, Length=301, Percent_Identity=24.9169435215947, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1789808, Length=232, Percent_Identity=25.8620689655172, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1790861, Length=211, Percent_Identity=28.436018957346, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 73336; Mature: 73336
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVISLFILCFASTLAFSSTNKEKQLEALSDSVSNKIGQKDFIPFYQEYMRLARQQNDTAK CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCH IDDAYSQIASHYYRLRNTDSLKVVAYEYMDWCLKRGNINNRYTQWRQYIQLLTEKGLQDE HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH AMRETGLLQKDADAAKSAFGMACSEMCIGYNHRVFSNNVKLCLEYYSSALKKFSDAGFYE HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCC DAYVVSLNIIQTYLARGEYANAMEYLNRMPGLIEKMKRKDIPVRPELTMRYYQFQVIATL CHHEEHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ALKGKKEAQPFIAEADKFYHENMNAFPREGWLGYKILCARTLNDNQMALNYLDSLMDYHH HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH SVGSCYPANHLLKAQFMEQMGRFEDACEVYKSYAHINDSIRSAELDEQLSKYTVQFEVDK HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECH LEHDKLELRAEVNRNLFITSVIVGCLVLILLIVITFYYMRSLSLNRKLDAANKAVIKASH HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MKSSFIQHITHEIRTPLNSIIGFSSLMAAGGLTQEEMEEYARQMESSNAYLLDLVNNVID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH IADMDSQTDDIPKKPVSVDACCQECLGLIRQNLKEGIKLQYMPSSTPVEVCTVEIWMKRV HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH LLGLLNNANKFTETGFIRLSYEEDKPNRLVRFIIEDSGPGIEEHFRDAIFERFAKADTFT HHHHHHCCCHHCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC QGTGLGLSIIRQIMELVDGNVYLDTSYAGGARFVVEWPQ CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCC >Mature Secondary Structure MVISLFILCFASTLAFSSTNKEKQLEALSDSVSNKIGQKDFIPFYQEYMRLARQQNDTAK CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCH IDDAYSQIASHYYRLRNTDSLKVVAYEYMDWCLKRGNINNRYTQWRQYIQLLTEKGLQDE HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH AMRETGLLQKDADAAKSAFGMACSEMCIGYNHRVFSNNVKLCLEYYSSALKKFSDAGFYE HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCC DAYVVSLNIIQTYLARGEYANAMEYLNRMPGLIEKMKRKDIPVRPELTMRYYQFQVIATL CHHEEHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ALKGKKEAQPFIAEADKFYHENMNAFPREGWLGYKILCARTLNDNQMALNYLDSLMDYHH HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHH SVGSCYPANHLLKAQFMEQMGRFEDACEVYKSYAHINDSIRSAELDEQLSKYTVQFEVDK HCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECH LEHDKLELRAEVNRNLFITSVIVGCLVLILLIVITFYYMRSLSLNRKLDAANKAVIKASH HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH MKSSFIQHITHEIRTPLNSIIGFSSLMAAGGLTQEEMEEYARQMESSNAYLLDLVNNVID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH IADMDSQTDDIPKKPVSVDACCQECLGLIRQNLKEGIKLQYMPSSTPVEVCTVEIWMKRV HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH LLGLLNNANKFTETGFIRLSYEEDKPNRLVRFIIEDSGPGIEEHFRDAIFERFAKADTFT HHHHHHCCCHHCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC QGTGLGLSIIRQIMELVDGNVYLDTSYAGGARFVVEWPQ CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7984107 [H]