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The map label for this gene is 29347138

Identifier: 29347138

GI number: 29347138

Start: 2126948

End: 2127538

Strand: Reverse

Name: 29347138

Synonym: BT_1728

Alternate gene names: NA

Gene position: 2127538-2126948 (Counterclockwise)

Preceding gene: 29347139

Following gene: 29347137

Centisome position: 33.98

GC content: 40.78

Gene sequence:

>591_bases
ATGAATACAACATTTTGGGAGAAAATCCAGCAGGGGGATGAAGAAGCATTCCGGCAACTCTACAATGAATATTCGGATTT
ACTTTACGGATATGGGATGAAGATTGCCGGTGATGATAATCTGGTAACTGAATCCATTCAGTCATTGTTCGTTTATCTGT
ATGAGAAGAGGCAGAGTTGTTCCGAGCCTCAGTCCATATCCGCTTACCTGTGTGTGGCGCTGAAACGCATGCTGCTGAAT
GAGTTGAAGAAAACTGCTAATGGCGTATTCACATCATTGGACGAAGTTAATTCAAGCGAATATAGATTCGATTTGGAGAT
AGACATAGAAACAGCGATTGTCCGTTCCGAACTTGAAAGAGAGCAGTTAGAAGTTCTGCAGAAAGAAATAAATGGCTTGA
CAAAGCAGCAGAGAGAGGTATTATACCTGAAGTATTATAAAAAACTGGATTCGGATGAAATAGCCGAAGTGATGGGGCTG
ACTTCCCGTACTGTTTATAATACTACCCACATGGCAATATCCAGACTGAGAGAGCGATTGAGCAAATCATTCCTGTTGAC
TGTAGCTGCTAATTTATGGATTTTTAATTGA

Upstream 100 bases:

>100_bases
TTCCACTTCACAAGTGAATTTTAGTCTGCTTGGTGGAATTTAACAAAAATAATTGGTAAAAGGGGAAGAATTATGTTACC
TGTAAATAAGGGAAGGAGAA

Downstream 100 bases:

>100_bases
GGTGAGGATATGGAGAATAGGAAAGAACTTCTGGAACAATATATGGAAGACGGCAAACTTCCTCTGAAAGGTGAGTTGTT
TGCACGGAAGTCTGTAGTTG

Product: RNA polymerase ECF-type sigma factor

Products: NA

Alternate protein names: RNA Polymerase ECF-Type Sigma Factor; ECF-Type Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Factor; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-70 Region 4 Subfamily; RNA Polymerase Sigma Factor; RNA Polymerase Sigma; ECF-Type RNA Polymerase Sigma Factor

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNTTFWEKIQQGDEEAFRQLYNEYSDLLYGYGMKIAGDDNLVTESIQSLFVYLYEKRQSCSEPQSISAYLCVALKRMLLN
ELKKTANGVFTSLDEVNSSEYRFDLEIDIETAIVRSELEREQLEVLQKEINGLTKQQREVLYLKYYKKLDSDEIAEVMGL
TSRTVYNTTHMAISRLRERLSKSFLLTVAANLWIFN

Sequences:

>Translated_196_residues
MNTTFWEKIQQGDEEAFRQLYNEYSDLLYGYGMKIAGDDNLVTESIQSLFVYLYEKRQSCSEPQSISAYLCVALKRMLLN
ELKKTANGVFTSLDEVNSSEYRFDLEIDIETAIVRSELEREQLEVLQKEINGLTKQQREVLYLKYYKKLDSDEIAEVMGL
TSRTVYNTTHMAISRLRERLSKSFLLTVAANLWIFN
>Mature_196_residues
MNTTFWEKIQQGDEEAFRQLYNEYSDLLYGYGMKIAGDDNLVTESIQSLFVYLYEKRQSCSEPQSISAYLCVALKRMLLN
ELKKTANGVFTSLDEVNSSEYRFDLEIDIETAIVRSELEREQLEVLQKEINGLTKQQREVLYLKYYKKLDSDEIAEVMGL
TSRTVYNTTHMAISRLRERLSKSFLLTVAANLWIFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22895; Mature: 22895

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTFWEKIQQGDEEAFRQLYNEYSDLLYGYGMKIAGDDNLVTESIQSLFVYLYEKRQSC
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCC
SEPQSISAYLCVALKRMLLNELKKTANGVFTSLDEVNSSEYRFDLEIDIETAIVRSELER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHH
EQLEVLQKEINGLTKQQREVLYLKYYKKLDSDEIAEVMGLTSRTVYNTTHMAISRLRERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SKSFLLTVAANLWIFN
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTTFWEKIQQGDEEAFRQLYNEYSDLLYGYGMKIAGDDNLVTESIQSLFVYLYEKRQSC
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHCC
SEPQSISAYLCVALKRMLLNELKKTANGVFTSLDEVNSSEYRFDLEIDIETAIVRSELER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHH
EQLEVLQKEINGLTKQQREVLYLKYYKKLDSDEIAEVMGLTSRTVYNTTHMAISRLRERL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SKSFLLTVAANLWIFN
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA