Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347120

Identifier: 29347120

GI number: 29347120

Start: 2106556

End: 2107668

Strand: Reverse

Name: 29347120

Synonym: BT_1710

Alternate gene names: NA

Gene position: 2107668-2106556 (Counterclockwise)

Preceding gene: 29347121

Following gene: 29347119

Centisome position: 33.67

GC content: 30.01

Gene sequence:

>1113_bases
ATGTTGATTTATTGGGTTGTTTTCTTTATTCTTTTTCTTTTTAGTTATGTAGAACTTATTTCCGCTAGACAGTCCTTGGT
ATTATTAAGATGCGTGATTCTATTTATAGCATGTATGGTGGGATTTCGTTATAATATAGGGGCTGATTGGGAGACATATG
TAATTATTTACAACAGGCAGATTCCGTCGCTTCTAGATCCAGAATATAGAATTCTCATGGAACCTCTTTTTTGGATTTTA
GGGAGTTTATGTAAAACTCTAGGTTTAAGTTATGCGTGTTTTTTTATAATATTGTCATTGATATCGTTTGTCGTATTATT
TATAGTTATTAGACGAATTGGATGTGGATATATTTATTTGCCAATTCTTTTATATTTTTGTTTGTTTTTCTGTCAGTTCC
AGCTAAATATAGTTCGCCACGGGATTATGGCTTCATTTGTGTGGCTAGCTTTTTCATATATAAAGGAATGTTCTTTGAAG
AAGTTTGTTTTTTTTCTTTTGATAGCTGCAGGCTTTCAACTTGCTGCGTTGGCCTTTTTCCCATTTTATTTCTTGTTGAA
TAGATGTTATATGCAGAAGAGTGTTGTTACTCTTATTTTTATATCATTGATTTTTGTAATGTTGGGAGTATCACAAAAAA
TACTGTTATTGGGTACTAAAATACCTGTTTTTGGGGAATTTGTAAACTATTATATTCTAGATTTTTATGGACGGAATGTT
GATGCTTCTTATGGTTTTTCTGTAGGGATGATTGTTAATTTGTTCCTTTTTTTGTTTCTTTATTTTGGAATGCGTTCCGT
CTATAATGATATATCTAATCATTTGAAGATTTTTGTAAACTTATTACTTTATAGTTTTATATTGAGTTGTTTTTTTAATG
CATATGCGGTTTTTGTAGAACGGTTAGTGAGCGTTACTAATATGACTTTACTATTTATATTACCTTACGTTTTGCATAAA
ATCTTTATTGGAAAAGTTAATAAAACAATAGCATTTGCTTGCATTGTTGTATATGCGATGTTGATGTTTACTAAGACGCT
TTATACACCAGTTCCGTTAGGTGGAAAGTATGAATATCAGTTTATTCCTTACCAGTATTCATTTGTTATTTAA

Upstream 100 bases:

>100_bases
TTTCCAATCGTAATAATTTGGCTTTTAATGATATTATTTTTAGAAAATATGCTCAAAATAGTGAGTCCTTAGTTGTAAAT
AGTTATATTCAAATTTAAAG

Downstream 100 bases:

>100_bases
GGGATTATAACGTTTGGTAGATGAGTGTAATTCAATTTGTCTTTTCTGTGATCTAATTGGATGTTCTGAGAGTAATATAT
CCTAATTTTATCAATATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQIPSLLDPEYRILMEPLFWIL
GSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYLPILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLK
KFVFFLLIAAGFQLAALAFFPFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV
DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVERLVSVTNMTLLFILPYVLHK
IFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQFIPYQYSFVI

Sequences:

>Translated_370_residues
MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQIPSLLDPEYRILMEPLFWIL
GSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYLPILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLK
KFVFFLLIAAGFQLAALAFFPFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV
DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVERLVSVTNMTLLFILPYVLHK
IFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQFIPYQYSFVI
>Mature_370_residues
MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQIPSLLDPEYRILMEPLFWIL
GSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYLPILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLK
KFVFFLLIAAGFQLAALAFFPFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV
DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVERLVSVTNMTLLFILPYVLHK
IFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQFIPYQYSFVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43244; Mature: 43244

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
IPSLLDPEYRILMEPLFWILGSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
PILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLKKFVFFLLIAAGFQLAALAFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCC
DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLVSVTNMTLLFILPYVLHKIFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
FIPYQYSFVI
EECEEEEEEC
>Mature Secondary Structure
MLIYWVVFFILFLFSYVELISARQSLVLLRCVILFIACMVGFRYNIGADWETYVIIYNRQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
IPSLLDPEYRILMEPLFWILGSLCKTLGLSYACFFIILSLISFVVLFIVIRRIGCGYIYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
PILLYFCLFFCQFQLNIVRHGIMASFVWLAFSYIKECSLKKFVFFLLIAAGFQLAALAFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFYFLLNRCYMQKSVVTLIFISLIFVMLGVSQKILLLGTKIPVFGEFVNYYILDFYGRNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCC
DASYGFSVGMIVNLFLFLFLYFGMRSVYNDISNHLKIFVNLLLYSFILSCFFNAYAVFVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLVSVTNMTLLFILPYVLHKIFIGKVNKTIAFACIVVYAMLMFTKTLYTPVPLGGKYEYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
FIPYQYSFVI
EECEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA