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The map label for this gene is yibD [C]

Identifier: 29347119

GI number: 29347119

Start: 2105596

End: 2106417

Strand: Reverse

Name: yibD [C]

Synonym: BT_1709

Alternate gene names: 29347119

Gene position: 2106417-2105596 (Counterclockwise)

Preceding gene: 29347120

Following gene: 29347118

Centisome position: 33.65

GC content: 33.7

Gene sequence:

>822_bases
ATGTCAAAATTAATATTTTCAGTACTTATTTCTGTATATTATAATGAAAGTATTTCTTATTTTAAAAAGAGCTTAGATAG
TATTTTATATCAGACTCTTTTACCTGCAGAGGTTGTTTTAGTCAAAGATGGGATTTTGACAGATGATTTAAATTGTATTG
TCAAAGAGTATTCTCAAAAATATCCTATTTTGAAAGTGATTTCTTTGCCTGTTAATCAAGGACTTGGTAAAGCACTGAAT
GAAGGCTTAAAGCATTGCTCCTACGATCTAGTTGCCCGAATGGATACAGATGATATTGCCAAACCTGATCGTTTTGAGAA
ACAAATAAGGGTTTTTCAAGAGCATCCGGAATTAGATGTAGTAGGAGCATGGATCGATGAGTTTGAAGAAACTACTTCAA
ATATTATTTCTACAAGAAAGTTACCTGAGGTTCATGATGATATTTGTCAATTTGCAAAGAAGCGTAATCCGGAAAATCAT
CCGGTAATTATGTTTCGTAAGCAAGCTGTATTAGCAGCAGGTGGATATCAGCATTTCCCTCTTTTTGAGGATTACTATCT
GTGGATACGTATGCTACAGAACGGTGCTAAATTTTACAATATCCAAGAGAGCTTATTATATTTTCGCTTTTCACCGGCTA
TGTTTAAACGGAGAGGCGGTTTAAAATATGTGACAACGGAACTACGTTTTCAAAATCAACTAAGAAATTTAGGATTCATA
ACTTCCTCTGAATATCTCTATAATGTCTTTATACGGGTGATTACTAGGATGATGCCCAACACTTTACGAGCTATCTTGTA
TAAAAAAGCTCTGAGAAAATAG

Upstream 100 bases:

>100_bases
GTCTTTTCTGTGATCTAATTGGATGTTCTGAGAGTAATATATCCTAATTTTATCAATATCTGTTTCTTTGGATATTGTAT
CCATATGTAAATTTATCAAA

Downstream 100 bases:

>100_bases
TCTTTAACCAAACTATAATTAATAATTTATGGAACAACAAACAACTTTTATTCCCGACGGAATGAATGCTTTTGAGCGCA
ATGTAAAGCGAATTGGGGAT

Product: putative glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSKLIFSVLISVYYNESISYFKKSLDSILYQTLLPAEVVLVKDGILTDDLNCIVKEYSQKYPILKVISLPVNQGLGKALN
EGLKHCSYDLVARMDTDDIAKPDRFEKQIRVFQEHPELDVVGAWIDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENH
PVIMFRKQAVLAAGGYQHFPLFEDYYLWIRMLQNGAKFYNIQESLLYFRFSPAMFKRRGGLKYVTTELRFQNQLRNLGFI
TSSEYLYNVFIRVITRMMPNTLRAILYKKALRK

Sequences:

>Translated_273_residues
MSKLIFSVLISVYYNESISYFKKSLDSILYQTLLPAEVVLVKDGILTDDLNCIVKEYSQKYPILKVISLPVNQGLGKALN
EGLKHCSYDLVARMDTDDIAKPDRFEKQIRVFQEHPELDVVGAWIDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENH
PVIMFRKQAVLAAGGYQHFPLFEDYYLWIRMLQNGAKFYNIQESLLYFRFSPAMFKRRGGLKYVTTELRFQNQLRNLGFI
TSSEYLYNVFIRVITRMMPNTLRAILYKKALRK
>Mature_272_residues
SKLIFSVLISVYYNESISYFKKSLDSILYQTLLPAEVVLVKDGILTDDLNCIVKEYSQKYPILKVISLPVNQGLGKALNE
GLKHCSYDLVARMDTDDIAKPDRFEKQIRVFQEHPELDVVGAWIDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENHP
VIMFRKQAVLAAGGYQHFPLFEDYYLWIRMLQNGAKFYNIQESLLYFRFSPAMFKRRGGLKYVTTELRFQNQLRNLGFIT
SSEYLYNVFIRVITRMMPNTLRAILYKKALRK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 31953; Mature: 31821

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLIFSVLISVYYNESISYFKKSLDSILYQTLLPAEVVLVKDGILTDDLNCIVKEYSQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHCC
YPILKVISLPVNQGLGKALNEGLKHCSYDLVARMDTDDIAKPDRFEKQIRVFQEHPELDV
CCCHHEEECCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEE
VGAWIDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENHPVIMFRKQAVLAAGGYQHFP
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHCCCCCCCC
LFEDYYLWIRMLQNGAKFYNIQESLLYFRFSPAMFKRRGGLKYVTTELRFQNQLRNLGFI
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHHHHHHHHCCCC
TSSEYLYNVFIRVITRMMPNTLRAILYKKALRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKLIFSVLISVYYNESISYFKKSLDSILYQTLLPAEVVLVKDGILTDDLNCIVKEYSQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHCC
YPILKVISLPVNQGLGKALNEGLKHCSYDLVARMDTDDIAKPDRFEKQIRVFQEHPELDV
CCCHHEEECCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEE
VGAWIDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENHPVIMFRKQAVLAAGGYQHFP
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHCCCCCCCC
LFEDYYLWIRMLQNGAKFYNIQESLLYFRFSPAMFKRRGGLKYVTTELRFQNQLRNLGFI
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCCEEHHHHHHHHHHHHCCCC
TSSEYLYNVFIRVITRMMPNTLRAILYKKALRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]