| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347055
Identifier: 29347055
GI number: 29347055
Start: 2034688
End: 2035497
Strand: Reverse
Name: 29347055
Synonym: BT_1645
Alternate gene names: NA
Gene position: 2035497-2034688 (Counterclockwise)
Preceding gene: 29347056
Following gene: 29347054
Centisome position: 32.51
GC content: 34.07
Gene sequence:
>810_bases ATGTTTTCCGTTTTATTATCCGTTTATTATAACGAATCTCCATATTATTTCCGACAATCAATAGATAGCCTTTTTAATCA AAGTTTACAATTAGCAGAAGTTGTATTGGTGAAAGATGGAGAGCTTACGCCTGAGTTGGAAAATGTAATAACTGAATATA CTGCTAAATATCTTCAGATTAGAGTTGTTCCTTTAAAGCAGAATCAAGGACTTGGTAAAGCTCTAAATGAAGGCTTAAAG CATTGCTCCTACGATTTAGTTGCCCGAATGGATACAGACGATATAGCCAAGCCTAATCGTTTTGAGAAACAAATAAGGGT TTTTCAGGAGCATCCGGAATTGGATGTAGTAGGAGCATGGATTGATGAGTTTGAAGAAACTACTTCAAATATTATTTCTA CAAGAAAATTACCTGAAGTTCATGATGATATTTGTCAATTTGCAAAGAAGCGTAATCCAGAAAATCATCCGGTAATCATG TTTCGTAAGCAAGCTGTATTAGCAGCTGGTGGATATCAGCATTTCCCTCTTTTTGAAGATTATTATCTATGGATACGTAT GCTACAGAATGGTGCGAAATTTTATAATATCCAAGAGAGCTTATTATATTTTCGTTTTTCATCAGCTATGTTTAAACGAA GAGGTGGCTTAAAATATGTGACTACGGAACTACGTTTTCAGAATCTGCTGAGAAATTTAGAATTCATAACTTTCTCTGAA TATCTCTATAATGTCTTTATACGGGTGATTACCAGGATGATGCCCAATTCTTTACGGGCTATCTTGTATAAAAAAGCTTT GAGAAAATAA
Upstream 100 bases:
>100_bases TCATTAAGGGCATTAAAAATACTTCCTTTATTCAAGAGTATATATATATCACTTTCTTTATTGTTAAGAAAAACTTTATC ATAAATCTGAATTCAAATTA
Downstream 100 bases:
>100_bases TCTTTAACCAAACTATAATTAATAATTTATGGAACAACAAACAACTTTCATTCCTGACGGAATGAATGCTTTTGAGCGCA ATGTAAAACGGGTGGGGGAT
Product: putative glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MFSVLLSVYYNESPYYFRQSIDSLFNQSLQLAEVVLVKDGELTPELENVITEYTAKYLQIRVVPLKQNQGLGKALNEGLK HCSYDLVARMDTDDIAKPNRFEKQIRVFQEHPELDVVGAWIDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENHPVIM FRKQAVLAAGGYQHFPLFEDYYLWIRMLQNGAKFYNIQESLLYFRFSSAMFKRRGGLKYVTTELRFQNLLRNLEFITFSE YLYNVFIRVITRMMPNSLRAILYKKALRK
Sequences:
>Translated_269_residues MFSVLLSVYYNESPYYFRQSIDSLFNQSLQLAEVVLVKDGELTPELENVITEYTAKYLQIRVVPLKQNQGLGKALNEGLK HCSYDLVARMDTDDIAKPNRFEKQIRVFQEHPELDVVGAWIDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENHPVIM FRKQAVLAAGGYQHFPLFEDYYLWIRMLQNGAKFYNIQESLLYFRFSSAMFKRRGGLKYVTTELRFQNLLRNLEFITFSE YLYNVFIRVITRMMPNSLRAILYKKALRK >Mature_269_residues MFSVLLSVYYNESPYYFRQSIDSLFNQSLQLAEVVLVKDGELTPELENVITEYTAKYLQIRVVPLKQNQGLGKALNEGLK HCSYDLVARMDTDDIAKPNRFEKQIRVFQEHPELDVVGAWIDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENHPVIM FRKQAVLAAGGYQHFPLFEDYYLWIRMLQNGAKFYNIQESLLYFRFSSAMFKRRGGLKYVTTELRFQNLLRNLEFITFSE YLYNVFIRVITRMMPNSLRAILYKKALRK
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 31776; Mature: 31776
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSVLLSVYYNESPYYFRQSIDSLFNQSLQLAEVVLVKDGELTPELENVITEYTAKYLQI CHHHEEEHHCCCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHEE RVVPLKQNQGLGKALNEGLKHCSYDLVARMDTDDIAKPNRFEKQIRVFQEHPELDVVGAW EEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHH IDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENHPVIMFRKQAVLAAGGYQHFPLFED HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHCCCCCCCCCHHH YYLWIRMLQNGAKFYNIQESLLYFRFSSAMFKRRGGLKYVTTELRFQNLLRNLEFITFSE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH YLYNVFIRVITRMMPNSLRAILYKKALRK HHHHHHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure MFSVLLSVYYNESPYYFRQSIDSLFNQSLQLAEVVLVKDGELTPELENVITEYTAKYLQI CHHHEEEHHCCCCCHHHHHHHHHHHHCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHEE RVVPLKQNQGLGKALNEGLKHCSYDLVARMDTDDIAKPNRFEKQIRVFQEHPELDVVGAW EEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHH IDEFEETTSNIISTRKLPEVHDDICQFAKKRNPENHPVIMFRKQAVLAAGGYQHFPLFED HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHCCCCCCCCCHHH YYLWIRMLQNGAKFYNIQESLLYFRFSSAMFKRRGGLKYVTTELRFQNLLRNLEFITFSE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH YLYNVFIRVITRMMPNSLRAILYKKALRK HHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]