| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347021
Identifier: 29347021
GI number: 29347021
Start: 1983110
End: 1983478
Strand: Reverse
Name: 29347021
Synonym: BT_1611
Alternate gene names: NA
Gene position: 1983478-1983110 (Counterclockwise)
Preceding gene: 29347023
Following gene: 29347020
Centisome position: 31.68
GC content: 43.36
Gene sequence:
>369_bases TTGCGCCTACGGCGAAAAGTGCGGGTACTAATTGTTTCATTTATTATCTTCAAAAACGTAAATATCTTCGTTGGGCTTCT TCATCAGATACTTTTCACGTGCCACCTGTTCGATAGCATCCGGATTGCTGTTCAGCTCGTTGAGACGTTTGGTGTTCTCT TCGTAGTCCGCCCGGTATTTTTCTATCTCTTCTTTCAGCTGGCTGATTTCGCGTTCGTATCCCAGACGGCGGAACAGGCT GTTCTCGTCCAGAAAACCAATGATAACAGCAAATGCAACGACGGTGATAAGATACTTGCGCCGGCATATGAAACTCCAGA TAGTGATCAGTTTATCCATAATTTCTCTTTTTTATATCCGCAAAGATAA
Upstream 100 bases:
>100_bases TTTACTTGTGCCAGAGCAATGAATCCGGCTCCGATGGTATAGATATAAGGAGCATAGTTCCATCCGGTGATGTATACGGC AGCCCCTGTGAGAGCCATGA
Downstream 100 bases:
>100_bases AACTAATAACTTAAAAACTTACCGCTTTAGGTTCAAAACTTCTTTCTCTATCCTTTATTACTTATCACTTTTTTGTGTAC ATTTGCACTGAAAGCGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MRLRRKVRVLIVSFIIFKNVNIFVGLLHQILFTCHLFDSIRIAVQLVETFGVLFVVRPVFFYLFFQLADFAFVSQTAEQA VLVQKTNDNSKCNDGDKILAPAYETPDSDQFIHNFSFLYPQR
Sequences:
>Translated_122_residues MRLRRKVRVLIVSFIIFKNVNIFVGLLHQILFTCHLFDSIRIAVQLVETFGVLFVVRPVFFYLFFQLADFAFVSQTAEQA VLVQKTNDNSKCNDGDKILAPAYETPDSDQFIHNFSFLYPQR >Mature_122_residues MRLRRKVRVLIVSFIIFKNVNIFVGLLHQILFTCHLFDSIRIAVQLVETFGVLFVVRPVFFYLFFQLADFAFVSQTAEQA VLVQKTNDNSKCNDGDKILAPAYETPDSDQFIHNFSFLYPQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14211; Mature: 14211
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRRKVRVLIVSFIIFKNVNIFVGLLHQILFTCHLFDSIRIAVQLVETFGVLFVVRPVF CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYLFFQLADFAFVSQTAEQAVLVQKTNDNSKCNDGDKILAPAYETPDSDQFIHNFSFLYP HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCC QR CC >Mature Secondary Structure MRLRRKVRVLIVSFIIFKNVNIFVGLLHQILFTCHLFDSIRIAVQLVETFGVLFVVRPVF CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYLFFQLADFAFVSQTAEQAVLVQKTNDNSKCNDGDKILAPAYETPDSDQFIHNFSFLYP HHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCC QR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA