| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is feoB1 [H]
Identifier: 29347002
GI number: 29347002
Start: 1955928
End: 1958414
Strand: Reverse
Name: feoB1 [H]
Synonym: BT_1592
Alternate gene names: 29347002
Gene position: 1958414-1955928 (Counterclockwise)
Preceding gene: 29347004
Following gene: 29346999
Centisome position: 31.28
GC content: 44.67
Gene sequence:
>2487_bases ATGCGTTTATCCGAATTAGGAACAGGTGAAAAAGGTGTCATCGTTAAGGTCTTGGGACACGGAGGCTTTCGTAAACGTAT TGTGGAGATGGGTTTTATCAAAGGTAAAACTGTTGAAGTATTGTTGAATGCTCCACTGAAAGACCCGATTAAATATAAAG TCTTAGGTTATGAAATATCTCTTCGTCGTCAGGAAGCGGAAATGATTGAGGTAGTCAGCGAGGAAGAAGCAAAAAAACAA GCCGAAAAAGCTGTATATCACGAAGGTCTGCCCGAAGATGTTTCTGTAAAAGAAGAAGATATGAAACGGTTGGCGTTAGG TAAGCGCCGTACTATCAACGTTGCTCTGGTCGGGAATCCGAACTCAGGCAAAACTTCTCTTTTCAATCTGGCTTCCGGCG CTCATGAGCATGTAGGAAACTATAGCGGTGTGACGGTAGATGCCAAAGAAGGATATTTCGATTTCGAAGGTTATCATTTC CGTATTGTCGATTTGCCGGGAACGTATTCACTGTCAGCTTATACACCGGAAGAAATTTATGTCCGCCGTCACATTGTTGA TGAAACGCCGGACGTAATCATCAATGTAGTCGATTCTTCAAATCTGGAGCGAAATCTGTATCTGACTACCCAACTGATTG ATATGAATGTCCGTATGGTGGTAGCTTTGAATATTTACGATGAACTTGAATCCAGCGGTAATACATTGGATTATCATTTG TTGAGTAAATTGTTCGGAGTGCCGATGGTGCCTACTGTCAGCAAGAAGAATCGTGGACTGGATACCTTGTTTCATGTAGT AATCAACCTTTATGAAGGGGTTGATTTTTTTGACAAGCAGGGAAATATGAATCCGGAAGTTCTGAAAGACCTGACCGAAT GGCATGATTCTCTGGAAGACCGGAAGAATCATGAGGAAGAACATCTGGAGGATTACGTGCGCGAACATAAAAGGAAAGGG CGTGTATTCCGTCATATCCATATCAATCATGGTCCCGATCTGGAAAAAGCGATTGACGCTGTAAAAGAGGAAGTATCCAA GAATGAATTTATCCGCCATAAATATTCTACCCGCTTTCTGTCTATCAAGTTGCTGGAAAACGATCCCGATATAGAGAGCT TTGTACGGACGCTGCCCAATGCGGGAGAGATTTTCCGTATTCGCGACAAGATGGCCAAGCGCGTTCAGGAAACGATGAAC GAGGATTGCGAATCCGCCATAACGGATGCCAAATACGGTTTTATCAGTGGTGCGCTGAAAGAGACATTTACTGACAATCA TCTGGAGCAGGCGCAGACGACGAAGGTGCTGGATGCTATCGTTACTCATCGTATCTGGGGGTATCCTATCTTTTTCCTTT TCATGTACCTGATGTTTGAGGGAACATTTGTTCTCGGAGAATATCCGATGATGGGAATTGAATGGCTGGTGGGGCAAATC GGTGACTTGATTCGCAATAACATGTCGGAGGGGCCGTTGAAGGATATGCTGGTTGACGGTATCGTAGGCGGTGTAGGTGG TGTTATCGTCTTTCTGCCCAATATTCTGATTCTGTATTTCTGTATTTCGCTGATGGAAGACTCCGGTTATATGGCCCGTG CAGCGTTTATAATGGATAAAATTATGCATAAGATGGGCTTGCATGGAAAATCGTTTATTCCGTTGATTATGGGATTCGGT TGTAATGTGCCTGCTATCATGGCTTCCCGTACTATTGAGAACCGGAAAAGCCGTTTGATTACGATGTTGATTAACCCGTT GATGTCTTGTAGCGCGCGTCTGCCCATTTATCTTTTGTTGGTAGGAGCTTTCTTCCCGAACAATGCGAGTTTGGTGTTGT TAAGTATTTATGCGATCGGAATTTTTCTGGCTGTGCTGTTGGCGCGTCTGTTCAGCAAGTTTTTGGTAAAGGGTGATGAT ACTCCTTTTGTGATGGAGCTTCCTCCTTATCGAATGCCGACGGCAAAATCCATATTCCGTCATACATGGGAGAAGGGAGC GCAGTATCTGAAAAAAATGGGAGGGATTATTATGATTGCTTCTATTATCATCTGGTTCCTCGGATATTATCCGAACCATG AGGCGTATGAGACAGTAGCTGAACAACAGGAAAATTCTTATATCGGTCAGTTAGGACGGGCTATAGAGCCGGTGATAAAG CCGATGGGCTTTGACTGGAAGTTGGGTATCGGTTTGATTTCCGGAGTAGGGGCAAAAGAGCTGGTCGTTAGTACGCTGGG TGTTTTGTATGTGGATGATCCGGAGGCCGATGAGGCTAGCCTGGCGGAACGGATTCCGATAACTCCTTTAGTGGCGTTCT GTTATATGCTGTTTGTGCTGATTTACTTCCCTTGTATTGCGGCATTGGCGGCTATTAAGCAAGAGTCCGGCAGTTGGAAG TGGGCGCTCTTTGCAGCTTGCTATACCACAGGGCTGGCCTGGCTGGTGGCATTTTCAGTTTATCAGATTGGAGGAATGTT TGTATGA
Upstream 100 bases:
>100_bases AGATACCGTCAGCATACGAAAATCCTGCTATTTAAAAACATTCTAAATAATTTGCGTGCTCGGAAGTTATGAATTATCTT TGCCGAAAATTTAGATAGTT
Downstream 100 bases:
>100_bases ATAATTGGCAGGAATGGGTAGTCGGAGTACTGATTGTACTCTGCATTGCCCGTGTAATATATGGAATTTATCTTTTTTTT CGTCGTACGCGAGAAAGTGA
Product: putative ferrous iron transport protein
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 828; Mature: 828
Protein sequence:
>828_residues MRLSELGTGEKGVIVKVLGHGGFRKRIVEMGFIKGKTVEVLLNAPLKDPIKYKVLGYEISLRRQEAEMIEVVSEEEAKKQ AEKAVYHEGLPEDVSVKEEDMKRLALGKRRTINVALVGNPNSGKTSLFNLASGAHEHVGNYSGVTVDAKEGYFDFEGYHF RIVDLPGTYSLSAYTPEEIYVRRHIVDETPDVIINVVDSSNLERNLYLTTQLIDMNVRMVVALNIYDELESSGNTLDYHL LSKLFGVPMVPTVSKKNRGLDTLFHVVINLYEGVDFFDKQGNMNPEVLKDLTEWHDSLEDRKNHEEEHLEDYVREHKRKG RVFRHIHINHGPDLEKAIDAVKEEVSKNEFIRHKYSTRFLSIKLLENDPDIESFVRTLPNAGEIFRIRDKMAKRVQETMN EDCESAITDAKYGFISGALKETFTDNHLEQAQTTKVLDAIVTHRIWGYPIFFLFMYLMFEGTFVLGEYPMMGIEWLVGQI GDLIRNNMSEGPLKDMLVDGIVGGVGGVIVFLPNILILYFCISLMEDSGYMARAAFIMDKIMHKMGLHGKSFIPLIMGFG CNVPAIMASRTIENRKSRLITMLINPLMSCSARLPIYLLLVGAFFPNNASLVLLSIYAIGIFLAVLLARLFSKFLVKGDD TPFVMELPPYRMPTAKSIFRHTWEKGAQYLKKMGGIIMIASIIIWFLGYYPNHEAYETVAEQQENSYIGQLGRAIEPVIK PMGFDWKLGIGLISGVGAKELVVSTLGVLYVDDPEADEASLAERIPITPLVAFCYMLFVLIYFPCIAALAAIKQESGSWK WALFAACYTTGLAWLVAFSVYQIGGMFV
Sequences:
>Translated_828_residues MRLSELGTGEKGVIVKVLGHGGFRKRIVEMGFIKGKTVEVLLNAPLKDPIKYKVLGYEISLRRQEAEMIEVVSEEEAKKQ AEKAVYHEGLPEDVSVKEEDMKRLALGKRRTINVALVGNPNSGKTSLFNLASGAHEHVGNYSGVTVDAKEGYFDFEGYHF RIVDLPGTYSLSAYTPEEIYVRRHIVDETPDVIINVVDSSNLERNLYLTTQLIDMNVRMVVALNIYDELESSGNTLDYHL LSKLFGVPMVPTVSKKNRGLDTLFHVVINLYEGVDFFDKQGNMNPEVLKDLTEWHDSLEDRKNHEEEHLEDYVREHKRKG RVFRHIHINHGPDLEKAIDAVKEEVSKNEFIRHKYSTRFLSIKLLENDPDIESFVRTLPNAGEIFRIRDKMAKRVQETMN EDCESAITDAKYGFISGALKETFTDNHLEQAQTTKVLDAIVTHRIWGYPIFFLFMYLMFEGTFVLGEYPMMGIEWLVGQI GDLIRNNMSEGPLKDMLVDGIVGGVGGVIVFLPNILILYFCISLMEDSGYMARAAFIMDKIMHKMGLHGKSFIPLIMGFG CNVPAIMASRTIENRKSRLITMLINPLMSCSARLPIYLLLVGAFFPNNASLVLLSIYAIGIFLAVLLARLFSKFLVKGDD TPFVMELPPYRMPTAKSIFRHTWEKGAQYLKKMGGIIMIASIIIWFLGYYPNHEAYETVAEQQENSYIGQLGRAIEPVIK PMGFDWKLGIGLISGVGAKELVVSTLGVLYVDDPEADEASLAERIPITPLVAFCYMLFVLIYFPCIAALAAIKQESGSWK WALFAACYTTGLAWLVAFSVYQIGGMFV >Mature_828_residues MRLSELGTGEKGVIVKVLGHGGFRKRIVEMGFIKGKTVEVLLNAPLKDPIKYKVLGYEISLRRQEAEMIEVVSEEEAKKQ AEKAVYHEGLPEDVSVKEEDMKRLALGKRRTINVALVGNPNSGKTSLFNLASGAHEHVGNYSGVTVDAKEGYFDFEGYHF RIVDLPGTYSLSAYTPEEIYVRRHIVDETPDVIINVVDSSNLERNLYLTTQLIDMNVRMVVALNIYDELESSGNTLDYHL LSKLFGVPMVPTVSKKNRGLDTLFHVVINLYEGVDFFDKQGNMNPEVLKDLTEWHDSLEDRKNHEEEHLEDYVREHKRKG RVFRHIHINHGPDLEKAIDAVKEEVSKNEFIRHKYSTRFLSIKLLENDPDIESFVRTLPNAGEIFRIRDKMAKRVQETMN EDCESAITDAKYGFISGALKETFTDNHLEQAQTTKVLDAIVTHRIWGYPIFFLFMYLMFEGTFVLGEYPMMGIEWLVGQI GDLIRNNMSEGPLKDMLVDGIVGGVGGVIVFLPNILILYFCISLMEDSGYMARAAFIMDKIMHKMGLHGKSFIPLIMGFG CNVPAIMASRTIENRKSRLITMLINPLMSCSARLPIYLLLVGAFFPNNASLVLLSIYAIGIFLAVLLARLFSKFLVKGDD TPFVMELPPYRMPTAKSIFRHTWEKGAQYLKKMGGIIMIASIIIWFLGYYPNHEAYETVAEQQENSYIGQLGRAIEPVIK PMGFDWKLGIGLISGVGAKELVVSTLGVLYVDDPEADEASLAERIPITPLVAFCYMLFVLIYFPCIAALAAIKQESGSWK WALFAACYTTGLAWLVAFSVYQIGGMFV
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=784, Percent_Identity=32.1428571428571, Blast_Score=359, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007167 - InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF04023 FeoA; PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 93395; Mature: 93395
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSELGTGEKGVIVKVLGHGGFRKRIVEMGFIKGKTVEVLLNAPLKDPIKYKVLGYEIS CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEEE LRRQEAEMIEVVSEEEAKKQAEKAVYHEGLPEDVSVKEEDMKRLALGKRRTINVALVGNP EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECC NSGKTSLFNLASGAHEHVGNYSGVTVDAKEGYFDFEGYHFRIVDLPGTYSLSAYTPEEIY CCCCHHHHHHHCCHHHHCCCCCCEEEECCCCEEECCCEEEEEEECCCCEEECCCCHHHHH VRRHIVDETPDVIINVVDSSNLERNLYLTTQLIDMNVRMVVALNIYDELESSGNTLDYHL HHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEEECCEEEEEEEEHHHHHHCCCCEEHHHH LSKLFGVPMVPTVSKKNRGLDTLFHVVINLYEGVDFFDKQGNMNPEVLKDLTEWHDSLED HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHH RKNHEEEHLEDYVREHKRKGRVFRHIHINHGPDLEKAIDAVKEEVSKNEFIRHKYSTRFL HHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE SIKLLENDPDIESFVRTLPNAGEIFRIRDKMAKRVQETMNEDCESAITDAKYGFISGALK EEEEECCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETFTDNHLEQAQTTKVLDAIVTHRIWGYPIFFLFMYLMFEGTFVLGEYPMMGIEWLVGQI HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH GDLIRNNMSEGPLKDMLVDGIVGGVGGVIVFLPNILILYFCISLMEDSGYMARAAFIMDK HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IMHKMGLHGKSFIPLIMGFGCNVPAIMASRTIENRKSRLITMLINPLMSCSARLPIYLLL HHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VGAFFPNNASLVLLSIYAIGIFLAVLLARLFSKFLVKGDDTPFVMELPPYRMPTAKSIFR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH HTWEKGAQYLKKMGGIIMIASIIIWFLGYYPNHEAYETVAEQQENSYIGQLGRAIEPVIK HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMGFDWKLGIGLISGVGAKELVVSTLGVLYVDDPEADEASLAERIPITPLVAFCYMLFVL CCCCCEEECHHHHCCCCHHHHHHHHHCEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHH IYFPCIAALAAIKQESGSWKWALFAACYTTGLAWLVAFSVYQIGGMFV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRLSELGTGEKGVIVKVLGHGGFRKRIVEMGFIKGKTVEVLLNAPLKDPIKYKVLGYEIS CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEEE LRRQEAEMIEVVSEEEAKKQAEKAVYHEGLPEDVSVKEEDMKRLALGKRRTINVALVGNP EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECC NSGKTSLFNLASGAHEHVGNYSGVTVDAKEGYFDFEGYHFRIVDLPGTYSLSAYTPEEIY CCCCHHHHHHHCCHHHHCCCCCCEEEECCCCEEECCCEEEEEEECCCCEEECCCCHHHHH VRRHIVDETPDVIINVVDSSNLERNLYLTTQLIDMNVRMVVALNIYDELESSGNTLDYHL HHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEEECCEEEEEEEEHHHHHHCCCCEEHHHH LSKLFGVPMVPTVSKKNRGLDTLFHVVINLYEGVDFFDKQGNMNPEVLKDLTEWHDSLED HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHH RKNHEEEHLEDYVREHKRKGRVFRHIHINHGPDLEKAIDAVKEEVSKNEFIRHKYSTRFL HHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEE SIKLLENDPDIESFVRTLPNAGEIFRIRDKMAKRVQETMNEDCESAITDAKYGFISGALK EEEEECCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETFTDNHLEQAQTTKVLDAIVTHRIWGYPIFFLFMYLMFEGTFVLGEYPMMGIEWLVGQI HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH GDLIRNNMSEGPLKDMLVDGIVGGVGGVIVFLPNILILYFCISLMEDSGYMARAAFIMDK HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH IMHKMGLHGKSFIPLIMGFGCNVPAIMASRTIENRKSRLITMLINPLMSCSARLPIYLLL HHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH VGAFFPNNASLVLLSIYAIGIFLAVLLARLFSKFLVKGDDTPFVMELPPYRMPTAKSIFR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH HTWEKGAQYLKKMGGIIMIASIIIWFLGYYPNHEAYETVAEQQENSYIGQLGRAIEPVIK HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMGFDWKLGIGLISGVGAKELVVSTLGVLYVDDPEADEASLAERIPITPLVAFCYMLFVL CCCCCEEECHHHHCCCCHHHHHHHHHCEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHH IYFPCIAALAAIKQESGSWKWALFAACYTTGLAWLVAFSVYQIGGMFV HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]