| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346999
Identifier: 29346999
GI number: 29346999
Start: 1950570
End: 1950809
Strand: Reverse
Name: 29346999
Synonym: BT_1589
Alternate gene names: NA
Gene position: 1950809-1950570 (Counterclockwise)
Preceding gene: 29347002
Following gene: 29346998
Centisome position: 31.16
GC content: 35.42
Gene sequence:
>240_bases ATGTCATGGCCTTTCAGTTGTCGTTTGATGAGATTTTCAAACGGGGACAAACGGACTGCAAGAATGATAGAAAGTATTTC TTTGATGAATGTTGGCATCATTCCCGTATATCCTGTCAAAGATTCGGATATACTGAATTACAGAAAAGGACTGATAGCGT TTTATGAAATGGAAGACTACAGCCTATATACTGATTATTTTCTGGATAGACAGATTGAACGAATTAAGGAAATAGAATAA
Upstream 100 bases:
>100_bases ATATATACATTCTCTTGTAACATATCTTCGACAATAAGCTATAGATCGCTTCCTGTATTTAGCAAAATGAGTGCAATCCG GCCGGGATGATGTTTGATGT
Downstream 100 bases:
>100_bases TTCTTTGCTTACTCGTTTCAGCTTTTCTAAAATTATCCCATAAATACTGTTTATGCTGTTGAGGTGTCAAAAGTTTGCTA GGGAAAAATAAGGATTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSWPFSCRLMRFSNGDKRTARMIESISLMNVGIIPVYPVKDSDILNYRKGLIAFYEMEDYSLYTDYFLDRQIERIKEIE
Sequences:
>Translated_79_residues MSWPFSCRLMRFSNGDKRTARMIESISLMNVGIIPVYPVKDSDILNYRKGLIAFYEMEDYSLYTDYFLDRQIERIKEIE >Mature_78_residues SWPFSCRLMRFSNGDKRTARMIESISLMNVGIIPVYPVKDSDILNYRKGLIAFYEMEDYSLYTDYFLDRQIERIKEIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9484; Mature: 9353
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWPFSCRLMRFSNGDKRTARMIESISLMNVGIIPVYPVKDSDILNYRKGLIAFYEMEDY CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCEEEEEECCCC SLYTDYFLDRQIERIKEIE EEHHHHHHHHHHHHHHCCC >Mature Secondary Structure SWPFSCRLMRFSNGDKRTARMIESISLMNVGIIPVYPVKDSDILNYRKGLIAFYEMEDY CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCEEEEEECCCC SLYTDYFLDRQIERIKEIE EEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA