| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is yoaP [H]
Identifier: 29346997
GI number: 29346997
Start: 1948868
End: 1949620
Strand: Reverse
Name: yoaP [H]
Synonym: BT_1587
Alternate gene names: 29346997
Gene position: 1949620-1948868 (Counterclockwise)
Preceding gene: 29346998
Following gene: 29346994
Centisome position: 31.14
GC content: 37.05
Gene sequence:
>753_bases ATGAATACAGATTTTGTAAACTTAACAAAGGAAAACCTCAGTGATGAGCATCTATGCTGCATTATTCGCAGTAAAAAGCC TCATGCAGGTATTGACGCGAAGCGGCAATGGCTTTCCGACAGACTAAATGAAGGTCATGTTTTTAGAAAGCTAAATGCAA AAGCTACGGTTTTTATTGAGTATGCACCTCTTGAGACAGCTTGGGTTCCCATCATTGGTGATAACTATTATTATCTGTAT TGCTTATGGGTCTTAGGAAGTCCTAAGGGGAATGGGTATGGAAGAGCTTTGATGGAATATTGCCTGACAGACGCCAAAGA AAAAGGCAAATCCGGTGTTTGTATGCTTGGCTCAAAGAAGCGGAAGAACTGGCTTTCTGACCAATCGTTTGCGAAGAAAT TCGGTTTTGAAGTTGTTGATGCGACTGATAATGGATATGAACTGCTTGCACTTTCTTTTGACGGGACAATGCCGAAATTT GCGCAAAACGCGAAAAAAATGAAAATTGAAAGCGAAGATCTGACTATTTATTATGATATGCAATGCCCTTATATTTATCA AAAGATTGAAATGGTAAAACAGTATTGTGATACAAATAACGTTCCTGTATCTTTAATTCAAGTGGATACACTCCAAAAAG CGAAAGACCTGCCTTGTGTTTTCAATAACTGGGGCGTTTTTTATAAAGGAAATTTTGAAACAGTGAACTTACTTTTAGAT GTCGAACATTTAAAGAGAATACTTAAAAAATAA
Upstream 100 bases:
>100_bases TATCTCTTATGAAACTATAACTATTATATTCAGCCAAAATGGCAGAGTGCACCGTTAAGATCGGTTGATTGATGATATCT AATTTAAAACGAATGCGTAT
Downstream 100 bases:
>100_bases ATAAGCAGATGCAGATAATGATGGATTAATGAGATAGGGTTATTCTCTGTTTTATTTATCCTGTCTCTTTATTTTTTTTT GTTTCTGAAACGATAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MNTDFVNLTKENLSDEHLCCIIRSKKPHAGIDAKRQWLSDRLNEGHVFRKLNAKATVFIEYAPLETAWVPIIGDNYYYLY CLWVLGSPKGNGYGRALMEYCLTDAKEKGKSGVCMLGSKKRKNWLSDQSFAKKFGFEVVDATDNGYELLALSFDGTMPKF AQNAKKMKIESEDLTIYYDMQCPYIYQKIEMVKQYCDTNNVPVSLIQVDTLQKAKDLPCVFNNWGVFYKGNFETVNLLLD VEHLKRILKK
Sequences:
>Translated_250_residues MNTDFVNLTKENLSDEHLCCIIRSKKPHAGIDAKRQWLSDRLNEGHVFRKLNAKATVFIEYAPLETAWVPIIGDNYYYLY CLWVLGSPKGNGYGRALMEYCLTDAKEKGKSGVCMLGSKKRKNWLSDQSFAKKFGFEVVDATDNGYELLALSFDGTMPKF AQNAKKMKIESEDLTIYYDMQCPYIYQKIEMVKQYCDTNNVPVSLIQVDTLQKAKDLPCVFNNWGVFYKGNFETVNLLLD VEHLKRILKK >Mature_250_residues MNTDFVNLTKENLSDEHLCCIIRSKKPHAGIDAKRQWLSDRLNEGHVFRKLNAKATVFIEYAPLETAWVPIIGDNYYYLY CLWVLGSPKGNGYGRALMEYCLTDAKEKGKSGVCMLGSKKRKNWLSDQSFAKKFGFEVVDATDNGYELLALSFDGTMPKF AQNAKKMKIESEDLTIYYDMQCPYIYQKIEMVKQYCDTNNVPVSLIQVDTLQKAKDLPCVFNNWGVFYKGNFETVNLLLD VEHLKRILKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR012336 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 28783; Mature: 28783
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTDFVNLTKENLSDEHLCCIIRSKKPHAGIDAKRQWLSDRLNEGHVFRKLNAKATVFIE CCCCEEEEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEEE YAPLETAWVPIIGDNYYYLYCLWVLGSPKGNGYGRALMEYCLTDAKEKGKSGVCMLGSKK ECCCCEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCH RKNWLSDQSFAKKFGFEVVDATDNGYELLALSFDGTMPKFAQNAKKMKIESEDLTIYYDM HHCCCCCHHHHHHCCCEEEECCCCCEEEEEEEECCCCCHHHCCHHHEEEECCCEEEEEEC QCPYIYQKIEMVKQYCDTNNVPVSLIQVDTLQKAKDLPCVFNNWGVFYKGNFETVNLLLD CCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCEEECCCCEEEECCCEEEEEEEE VEHLKRILKK HHHHHHHHCC >Mature Secondary Structure MNTDFVNLTKENLSDEHLCCIIRSKKPHAGIDAKRQWLSDRLNEGHVFRKLNAKATVFIE CCCCEEEEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCEEEEEE YAPLETAWVPIIGDNYYYLYCLWVLGSPKGNGYGRALMEYCLTDAKEKGKSGVCMLGSKK ECCCCEEEEEEECCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCH RKNWLSDQSFAKKFGFEVVDATDNGYELLALSFDGTMPKFAQNAKKMKIESEDLTIYYDM HHCCCCCHHHHHHCCCEEEECCCCCEEEEEEEECCCCCHHHCCHHHEEEECCCEEEEEEC QCPYIYQKIEMVKQYCDTNNVPVSLIQVDTLQKAKDLPCVFNNWGVFYKGNFETVNLLLD CCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCEEECCCCEEEECCCEEEEEEEE VEHLKRILKK HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]