Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346998

Identifier: 29346998

GI number: 29346998

Start: 1949709

End: 1950179

Strand: Reverse

Name: 29346998

Synonym: BT_1588

Alternate gene names: NA

Gene position: 1950179-1949709 (Counterclockwise)

Preceding gene: 29346999

Following gene: 29346997

Centisome position: 31.15

GC content: 31.21

Gene sequence:

>471_bases
ATGAAAATTAAAGATAAGATAACTCAGAGTCTTGCAAGTATAACTGTTGAATTACAGGAAATAAGTCCTGATTTTTATGT
TATAGGTGCATCTGCTATGATTTTATCAGGTATAGAGGTCGGAGAAACTGCTGATATCGATATTTTGACTACCGAAATGA
ATTCATGCAAATTGCAACACTTGCTAAAAACATATATGGAAATATCTCCGGAAACAAAAGAGGATGATTTGTTTCGTTCT
AATTTTGCCAGATTCAAACTTCCTTTAATGGATATTGAGGTCATGGGGGATCTTCAAATTAAGAAAAACGATATTTGGCA
GTCTGTTTGTGTAAAAGAATATGAGGAAATATTCATTGGGAATTTAATTATCAAGATACCAACTATAGAAGAGCAAAAAA
GAATCTTATCTCTTTTTGGCAGAGAGAAAGATTTAAAGAGGATTTTAATACTAAATCACTATCTCTTATGA

Upstream 100 bases:

>100_bases
CGATAGTTGCTCTCATTACATTCATTAATGGTATTATTAAAGCCTGTTCTTTTACCTTTCTGAAATATATTTTGTATTTT
TGTTATATATTATTGGAGAT

Downstream 100 bases:

>100_bases
AACTATAACTATTATATTCAGCCAAAATGGCAGAGTGCACCGTTAAGATCGGTTGATTGATGATATCTAATTTAAAACGA
ATGCGTATATGAATACAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKIKDKITQSLASITVELQEISPDFYVIGASAMILSGIEVGETADIDILTTEMNSCKLQHLLKTYMEISPETKEDDLFRS
NFARFKLPLMDIEVMGDLQIKKNDIWQSVCVKEYEEIFIGNLIIKIPTIEEQKRILSLFGREKDLKRILILNHYLL

Sequences:

>Translated_156_residues
MKIKDKITQSLASITVELQEISPDFYVIGASAMILSGIEVGETADIDILTTEMNSCKLQHLLKTYMEISPETKEDDLFRS
NFARFKLPLMDIEVMGDLQIKKNDIWQSVCVKEYEEIFIGNLIIKIPTIEEQKRILSLFGREKDLKRILILNHYLL
>Mature_156_residues
MKIKDKITQSLASITVELQEISPDFYVIGASAMILSGIEVGETADIDILTTEMNSCKLQHLLKTYMEISPETKEDDLFRS
NFARFKLPLMDIEVMGDLQIKKNDIWQSVCVKEYEEIFIGNLIIKIPTIEEQKRILSLFGREKDLKRILILNHYLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18010; Mature: 18010

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKDKITQSLASITVELQEISPDFYVIGASAMILSGIEVGETADIDILTTEMNSCKLQH
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCCCEEEEECCCHHHHHHH
LLKTYMEISPETKEDDLFRSNFARFKLPLMDIEVMGDLQIKKNDIWQSVCVKEYEEIFIG
HHHHHHHCCCCCCCCHHHHHCHHHEECCEEEEEEECCEEECHHHHHHHHHHHHHHHHHHC
NLIIKIPTIEEQKRILSLFGREKDLKRILILNHYLL
CEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIKDKITQSLASITVELQEISPDFYVIGASAMILSGIEVGETADIDILTTEMNSCKLQH
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCCCEEEEECCCHHHHHHH
LLKTYMEISPETKEDDLFRSNFARFKLPLMDIEVMGDLQIKKNDIWQSVCVKEYEEIFIG
HHHHHHHCCCCCCCCHHHHHCHHHEECCEEEEEEECCEEECHHHHHHHHHHHHHHHHHHC
NLIIKIPTIEEQKRILSLFGREKDLKRILILNHYLL
CEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA