Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346980

Identifier: 29346980

GI number: 29346980

Start: 1933066

End: 1935243

Strand: Reverse

Name: 29346980

Synonym: BT_1570

Alternate gene names: NA

Gene position: 1935243-1933066 (Counterclockwise)

Preceding gene: 29346981

Following gene: 29346979

Centisome position: 30.91

GC content: 44.63

Gene sequence:

>2178_bases
ATGCGATACCTGATATTTCTGATATTGGCCGGCTTTACCGGAGTTACTGCTTGGGGGCAGACTTCGACGACTGCTCGGCC
GATGGCTGTGAATGATACTCTGACAGAAGATTCCACTTATGCGTTGCAGGAAGTGGTGGTACGGACAAGTCCTGTGAAAC
GGAAGGCAGACCGTTTTATCCTGTCCGTCCCTCCTGCACAGAACAAAGACGGAGTCGAACTCCTTCAACAAGCGCCCGGA
GTATGGTTGTCCGACGAGCGGATTTCCATCAATGGTTCTTCCGGCACGAAGGTGTTTGTAGATAATAGGGAGATAAAACT
TACCGGAGAGATGCTGATAGGCTATCTCCGTTCTTTGAAATCGGACGATATTGCCCGCGTTGAAGTGCTTCCAATGGCGG
GAGCCGATAAGGATGCCGATGCTCAGGGAGGTGCTATACATATTATAATGAGACGTCATACGGACAAAGGATTTCAGGGA
AATCTTTCTATGAATGCTTCTTTTGCCTCTTCCTTGCAATCTTATCAGCCTAGTGGTAGCTTGAATTATCATAGTGGGAA
GTGGGATACCTATGGATTTGCTTCCGGTACTTTGGTTCCTCAGAATAAAGGAGATTTGTACGTTACCCGTGATTATGTAG
CGGGAGATAAAGGTTTTTCCAGTCTGGCCCGTATGAAGCAGCCTTCGCGTTACGGGACGATTCGGATGGGAACAGTTTAT
ACGATGGACTCTTCCAATAGTCTGGGAGTAGAGCTGGAGTATGTTCGTCGCGGATACATCTGGCCGTCTCAGAGTTACTC
TACTCTGTCGGTAGGACCGCTGGATATGGAAAGTCAGGGTGTGTATCGTCAGAAAGAGACTTACAATATGTATACAGCTA
CTGCCAACTATATACATAAACTGGATAAGGACGGTTCGGTGCTGAAGCTTGTCACCGACTATATCTCTAAAGATCTGCAT
GGCAGAAATCAGTATCAAATTTTTCAGGAGATAGGTGCTCTAAATAAAGATACCGTTTACCGTTCCCGCTCTAATGCCAC
TTATCAGATCGCAACTGCCGATCTGTCGTGGAAACAACAGTTACATAAGAAATCGTTTTTCCAGATAGGAATGAAATATA
CCTATACGGGAATGAAAGATGATGCCTGTTACGAAGGGCTGGAACCTGACGAAAGTTGGAAGCCCAATGTTGCTTATGGA
TATGAACTCGATTATCACGAGAATATCGGTGCTTTATACGGAACTTATTCTCTGGATATGAAAAGAGGATCTGTTCATAT
TGGACTTCGGGGAGAATATACGCAAACCTCCAATGAAACAGAACGTCGGACGAGAAAATACTGGGATTGGTTTCCACATA
TCGACGGAAATTTCTATTTTGATGAAATTCACAAGTGGATGCTTATCGGTCAGTATGGACGCTATATAGAACGTCCGACT
TTTTCGGCTCTCAACCCGAACCGGATTCAGACTTCCGAATATAGTTATCTGATAGGCAACCCGATGTTGCGTCCTACTTA
TATTAATAAATTCAGTATTACGCTGGTCTATAACTTCCGGTATACATTGACTGTTGGCGGCAATTTGCACCATGATCTGA
TCCGTCAGTTTGGTAAAGAAGATGCGGAGAATTCGGATATATCATATGTCATCAATGAGAATCACAATCGTGAGAACCAT
TGGTTCGTAGCCATCACTGCTCCCTGGCAGCCGCTCAATTGGCTGAATCTGAATGCCAGCTTTATCGGAGTGAGGCAAGA
TATCCGCATGTATCGGGAGGACGATTACTTTGGGCACTTCCTTTATTTCGCCAATGCTAATGCTACGGTCCTTTTACCGT
CAGACTATTCGTTGGAAGCACAATATAATGGAGTTAGCCGGTTGTATTCCGGTAATAGCGGGATCGATCCTCGTCATACA
TTCAACCTGCACCTGCGCAAAAAATGGAAAGACGGGCGTTGTGTAGCTACTTTGGGGGTAGACAATATCTTCAACCGATA
TAATTCTTATTTCAGCAATGTACCGAGTTATTCATCTCAAAATCGTTTTGAACTGGCTTCGAGCGGAAGACTGATGAAAC
TCACATTTACCTGGAATTTCAATCATGGAAAGAAATCGGGTGCGGTGACTGTAGAAAAGAAATCGGCAAGTGAAAGAAGC
CGTATCGAAGGAAAATAG

Upstream 100 bases:

>100_bases
ATACCGGTAGAAGGGTATGCCCGGGAAAAATGCAAGAAAGAGGCGGATGCTTCGGCTACCGTTAAAATGAAGATGTATTA
TCCGGTAAATGACTAACAGT

Downstream 100 bases:

>100_bases
ACAAGGATTTTTGGTTTATTACGTAAACAATATTATTTTTGAAACAAAATTGATAGAATATGGAAGACAAGAGAATTTCA
GAGAAAGAGAGTTTGGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; Nb-Dependent Receptor Plug; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; Protein Containing nB-Dependent Receptor Plug Domain

Number of amino acids: Translated: 725; Mature: 725

Protein sequence:

>725_residues
MRYLIFLILAGFTGVTAWGQTSTTARPMAVNDTLTEDSTYALQEVVVRTSPVKRKADRFILSVPPAQNKDGVELLQQAPG
VWLSDERISINGSSGTKVFVDNREIKLTGEMLIGYLRSLKSDDIARVEVLPMAGADKDADAQGGAIHIIMRRHTDKGFQG
NLSMNASFASSLQSYQPSGSLNYHSGKWDTYGFASGTLVPQNKGDLYVTRDYVAGDKGFSSLARMKQPSRYGTIRMGTVY
TMDSSNSLGVELEYVRRGYIWPSQSYSTLSVGPLDMESQGVYRQKETYNMYTATANYIHKLDKDGSVLKLVTDYISKDLH
GRNQYQIFQEIGALNKDTVYRSRSNATYQIATADLSWKQQLHKKSFFQIGMKYTYTGMKDDACYEGLEPDESWKPNVAYG
YELDYHENIGALYGTYSLDMKRGSVHIGLRGEYTQTSNETERRTRKYWDWFPHIDGNFYFDEIHKWMLIGQYGRYIERPT
FSALNPNRIQTSEYSYLIGNPMLRPTYINKFSITLVYNFRYTLTVGGNLHHDLIRQFGKEDAENSDISYVINENHNRENH
WFVAITAPWQPLNWLNLNASFIGVRQDIRMYREDDYFGHFLYFANANATVLLPSDYSLEAQYNGVSRLYSGNSGIDPRHT
FNLHLRKKWKDGRCVATLGVDNIFNRYNSYFSNVPSYSSQNRFELASSGRLMKLTFTWNFNHGKKSGAVTVEKKSASERS
RIEGK

Sequences:

>Translated_725_residues
MRYLIFLILAGFTGVTAWGQTSTTARPMAVNDTLTEDSTYALQEVVVRTSPVKRKADRFILSVPPAQNKDGVELLQQAPG
VWLSDERISINGSSGTKVFVDNREIKLTGEMLIGYLRSLKSDDIARVEVLPMAGADKDADAQGGAIHIIMRRHTDKGFQG
NLSMNASFASSLQSYQPSGSLNYHSGKWDTYGFASGTLVPQNKGDLYVTRDYVAGDKGFSSLARMKQPSRYGTIRMGTVY
TMDSSNSLGVELEYVRRGYIWPSQSYSTLSVGPLDMESQGVYRQKETYNMYTATANYIHKLDKDGSVLKLVTDYISKDLH
GRNQYQIFQEIGALNKDTVYRSRSNATYQIATADLSWKQQLHKKSFFQIGMKYTYTGMKDDACYEGLEPDESWKPNVAYG
YELDYHENIGALYGTYSLDMKRGSVHIGLRGEYTQTSNETERRTRKYWDWFPHIDGNFYFDEIHKWMLIGQYGRYIERPT
FSALNPNRIQTSEYSYLIGNPMLRPTYINKFSITLVYNFRYTLTVGGNLHHDLIRQFGKEDAENSDISYVINENHNRENH
WFVAITAPWQPLNWLNLNASFIGVRQDIRMYREDDYFGHFLYFANANATVLLPSDYSLEAQYNGVSRLYSGNSGIDPRHT
FNLHLRKKWKDGRCVATLGVDNIFNRYNSYFSNVPSYSSQNRFELASSGRLMKLTFTWNFNHGKKSGAVTVEKKSASERS
RIEGK
>Mature_725_residues
MRYLIFLILAGFTGVTAWGQTSTTARPMAVNDTLTEDSTYALQEVVVRTSPVKRKADRFILSVPPAQNKDGVELLQQAPG
VWLSDERISINGSSGTKVFVDNREIKLTGEMLIGYLRSLKSDDIARVEVLPMAGADKDADAQGGAIHIIMRRHTDKGFQG
NLSMNASFASSLQSYQPSGSLNYHSGKWDTYGFASGTLVPQNKGDLYVTRDYVAGDKGFSSLARMKQPSRYGTIRMGTVY
TMDSSNSLGVELEYVRRGYIWPSQSYSTLSVGPLDMESQGVYRQKETYNMYTATANYIHKLDKDGSVLKLVTDYISKDLH
GRNQYQIFQEIGALNKDTVYRSRSNATYQIATADLSWKQQLHKKSFFQIGMKYTYTGMKDDACYEGLEPDESWKPNVAYG
YELDYHENIGALYGTYSLDMKRGSVHIGLRGEYTQTSNETERRTRKYWDWFPHIDGNFYFDEIHKWMLIGQYGRYIERPT
FSALNPNRIQTSEYSYLIGNPMLRPTYINKFSITLVYNFRYTLTVGGNLHHDLIRQFGKEDAENSDISYVINENHNRENH
WFVAITAPWQPLNWLNLNASFIGVRQDIRMYREDDYFGHFLYFANANATVLLPSDYSLEAQYNGVSRLYSGNSGIDPRHT
FNLHLRKKWKDGRCVATLGVDNIFNRYNSYFSNVPSYSSQNRFELASSGRLMKLTFTWNFNHGKKSGAVTVEKKSASERS
RIEGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82823; Mature: 82823

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLIFLILAGFTGVTAWGQTSTTARPMAVNDTLTEDSTYALQEVVVRTSPVKRKADRFI
CCEEEEEEHHCCCCCEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCHHCCCEEE
LSVPPAQNKDGVELLQQAPGVWLSDERISINGSSGTKVFVDNREIKLTGEMLIGYLRSLK
EECCCCCCCCHHHHHHHCCCCEECCCEEEEECCCCCEEEEECCEEEEEHHHHHHHHHHCC
SDDIARVEVLPMAGADKDADAQGGAIHIIMRRHTDKGFQGNLSMNASFASSLQSYQPSGS
CCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECHHHHHHHHHCCCCCC
LNYHSGKWDTYGFASGTLVPQNKGDLYVTRDYVAGDKGFSSLARMKQPSRYGTIRMGTVY
CCCCCCCCCCCEEECCEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCEEEEEEEE
TMDSSNSLGVELEYVRRGYIWPSQSYSTLSVGPLDMESQGVYRQKETYNMYTATANYIHK
EECCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCEEEEEHHHHHHH
LDKDGSVLKLVTDYISKDLHGRNQYQIFQEIGALNKDTVYRSRSNATYQIATADLSWKQQ
HCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCHHHHH
LHKKSFFQIGMKYTYTGMKDDACYEGLEPDESWKPNVAYGYELDYHENIGALYGTYSLDM
HHHHHHHHCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEE
KRGSVHIGLRGEYTQTSNETERRTRKYWDWFPHIDGNFYFDEIHKWMLIGQYGRYIERPT
ECCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHEEEEEHHHHHHCCCC
FSALNPNRIQTSEYSYLIGNPMLRPTYINKFSITLVYNFRYTLTVGGNLHHDLIRQFGKE
CCCCCCCCEECCCCEEEECCCCCCCEEECEEEEEEEEEEEEEEEECCCCCHHHHHHHCCC
DAENSDISYVINENHNRENHWFVAITAPWQPLNWLNLNASFIGVRQDIRMYREDDYFGHF
CCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCEEEEEHHHHHHHHCCCCCEEE
LYFANANATVLLPSDYSLEAQYNGVSRLYSGNSGIDPRHTFNLHLRKKWKDGRCVATLGV
EEEECCCEEEEECCCCEEEEECCCHHHEECCCCCCCCCEEEEEEEEEECCCCCEEEEECH
DNIFNRYNSYFSNVPSYSSQNRFELASSGRLMKLTFTWNFNHGKKSGAVTVEKKSASERS
HHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCEEEEECCCCCHHH
RIEGK
HCCCC
>Mature Secondary Structure
MRYLIFLILAGFTGVTAWGQTSTTARPMAVNDTLTEDSTYALQEVVVRTSPVKRKADRFI
CCEEEEEEHHCCCCCEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCHHCCCEEE
LSVPPAQNKDGVELLQQAPGVWLSDERISINGSSGTKVFVDNREIKLTGEMLIGYLRSLK
EECCCCCCCCHHHHHHHCCCCEECCCEEEEECCCCCEEEEECCEEEEEHHHHHHHHHHCC
SDDIARVEVLPMAGADKDADAQGGAIHIIMRRHTDKGFQGNLSMNASFASSLQSYQPSGS
CCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECHHHHHHHHHCCCCCC
LNYHSGKWDTYGFASGTLVPQNKGDLYVTRDYVAGDKGFSSLARMKQPSRYGTIRMGTVY
CCCCCCCCCCCEEECCEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCEEEEEEEE
TMDSSNSLGVELEYVRRGYIWPSQSYSTLSVGPLDMESQGVYRQKETYNMYTATANYIHK
EECCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCEEEEEHHHHHHH
LDKDGSVLKLVTDYISKDLHGRNQYQIFQEIGALNKDTVYRSRSNATYQIATADLSWKQQ
HCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCHHHHH
LHKKSFFQIGMKYTYTGMKDDACYEGLEPDESWKPNVAYGYELDYHENIGALYGTYSLDM
HHHHHHHHCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEE
KRGSVHIGLRGEYTQTSNETERRTRKYWDWFPHIDGNFYFDEIHKWMLIGQYGRYIERPT
ECCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHEEEEEHHHHHHCCCC
FSALNPNRIQTSEYSYLIGNPMLRPTYINKFSITLVYNFRYTLTVGGNLHHDLIRQFGKE
CCCCCCCCEECCCCEEEECCCCCCCEEECEEEEEEEEEEEEEEEECCCCCHHHHHHHCCC
DAENSDISYVINENHNRENHWFVAITAPWQPLNWLNLNASFIGVRQDIRMYREDDYFGHF
CCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEECCCEEEEEHHHHHHHHCCCCCEEE
LYFANANATVLLPSDYSLEAQYNGVSRLYSGNSGIDPRHTFNLHLRKKWKDGRCVATLGV
EEEECCCEEEEECCCCEEEEECCCHHHEECCCCCCCCCEEEEEEEEEECCCCCEEEEECH
DNIFNRYNSYFSNVPSYSSQNRFELASSGRLMKLTFTWNFNHGKKSGAVTVEKKSASERS
HHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCEEEEECCCCCHHH
RIEGK
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA