| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346981
Identifier: 29346981
GI number: 29346981
Start: 1935248
End: 1935622
Strand: Reverse
Name: 29346981
Synonym: BT_1571
Alternate gene names: NA
Gene position: 1935622-1935248 (Counterclockwise)
Preceding gene: 29346982
Following gene: 29346980
Centisome position: 30.92
GC content: 41.07
Gene sequence:
>375_bases ATGAAACGCTTGTTATTCATTGCTTTAGGGATTATTTGTTACCACGTTGTTACTTTTGCACAAGAAGTAAAAGTAGAAGT GCGGGGTATTCGTAGTGCAAAAGGCGCTATTATGGTCATGGCACAACAGGATTCGGAATCGAAGCCGGTATATGCGATGG CTACTGCTGTTAAAGATACAGTGACTGTTGTTCTAAAAGATGTTCCATGGGAAAAGTTTTTAATCTCTCTTTTCCATGAT GAGAACGGAAACTGGGAATTGGACATGAATGAACAGGGAATACCGGTAGAAGGGTATGCCCGGGAAAAATGCAAGAAAGA GGCGGATGCTTCGGCTACCGTTAAAATGAAGATGTATTATCCGGTAAATGACTAA
Upstream 100 bases:
>100_bases TAAGAGAGATGCGCAGCTCCTTACTTTTTTTAATCCATATAAGGTTTATAAAATAAACTAATTAAATCGTATCAACTAAT TGATTGGAGGAAAGTAAAAG
Downstream 100 bases:
>100_bases CAGTATGCGATACCTGATATTTCTGATATTGGCCGGCTTTACCGGAGTTACTGCTTGGGGGCAGACTTCGACGACTGCTC GGCCGATGGCTGTGAATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MKRLLFIALGIICYHVVTFAQEVKVEVRGIRSAKGAIMVMAQQDSESKPVYAMATAVKDTVTVVLKDVPWEKFLISLFHD ENGNWELDMNEQGIPVEGYAREKCKKEADASATVKMKMYYPVND
Sequences:
>Translated_124_residues MKRLLFIALGIICYHVVTFAQEVKVEVRGIRSAKGAIMVMAQQDSESKPVYAMATAVKDTVTVVLKDVPWEKFLISLFHD ENGNWELDMNEQGIPVEGYAREKCKKEADASATVKMKMYYPVND >Mature_124_residues MKRLLFIALGIICYHVVTFAQEVKVEVRGIRSAKGAIMVMAQQDSESKPVYAMATAVKDTVTVVLKDVPWEKFLISLFHD ENGNWELDMNEQGIPVEGYAREKCKKEADASATVKMKMYYPVND
Specific function: Unknown
COG id: COG4704
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14019; Mature: 14019
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLFIALGIICYHVVTFAQEVKVEVRGIRSAKGAIMVMAQQDSESKPVYAMATAVKDT CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCEEEEHHHHHHH VTVVLKDVPWEKFLISLFHDENGNWELDMNEQGIPVEGYAREKCKKEADASATVKMKMYY EEEEEECCCHHHHHHEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEEEE PVND ECCC >Mature Secondary Structure MKRLLFIALGIICYHVVTFAQEVKVEVRGIRSAKGAIMVMAQQDSESKPVYAMATAVKDT CCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCEEEEHHHHHHH VTVVLKDVPWEKFLISLFHDENGNWELDMNEQGIPVEGYAREKCKKEADASATVKMKMYY EEEEEECCCHHHHHHEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEEEE PVND ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA