Click here to switch to the map view.

The map label for this gene is 29346940

Identifier: 29346940

GI number: 29346940

Start: 1886797

End: 1888275

Strand: Reverse

Name: 29346940

Synonym: BT_1530

Alternate gene names: NA

Gene position: 1888275-1886797 (Counterclockwise)

Preceding gene: 29346941

Following gene: 29346939

Centisome position: 30.16

GC content: 46.11

Gene sequence:

>1479_bases
ATGAAAAAGAAAAGTATATTGTTTGTTCTGGCTGCAATCTGTCTGCCTTTGGCAGTGTCGGCACAGAAAGAGAGGGAAAT
CACCTTGAACGAAGCTATCGCTATGGCGCGTATGCAGTCTGTTGACGCTGCCGTTGCCTTGAATGAGTTGAAAACATCTT
ATTGGGAATATCGCACATTCCGTGCCGATCTTCTTCCGGAAATCAATCTGAAAGGAACACTGCCTAATTACAATAAATCT
TACGGCTCCTATCAGAATCCGGACGGTTCTTACAGCTTTGTCCGCAACAGCGCCTTAGGTCTTTCCGGTGAACTTTCCAT
CGACCAGAATATCTGGCTTACCGGTGGACAACTTTCACTAACCTCTTCCCTCGACTACCTAAAGCAACTGGGTAATAGCG
GTGATCGCCATCTGATGTCCGTTCCTGTTACTTTAAAACTGACCCAACCTATTCTTGGTGTGAATAATGTGAAGTGGAAC
AGGCGTATAGAACCTGTGCGATATGCCGAAGCGAAAGCGGAATTTATCACAGCTACCGAAGAAGTGACGATGCGGGCTAT
TACCTATTATTTTGATCTGCTGTTGGCGAAGGAGACTCTTGGAACCGCCCGTCAGAACTTGACGAATGCCAATCAGCTTT
ACGAAGTGGCTATAGCTAAACGCAAGATGGGACAGATTTCGGAAAATGAACTTCTCCAGTTAAAACTTTCGGCATTGAAT
GCAAAGGCTGCGTTGACCGAAGCCGAAAGTGATCTGAATGCCAAGATGTTCCAGCTTCGTGCCTTTCTGGGAGTGGGAGA
GGATGAAATCCTCCGTCCTGTCGTTCCCGAGTCGGTAGATTGTGGTAAAATGGAATATAATATGGTTTTGAATAAAGCGC
TGGAACGTAATTCTTTTGCCCAGAATATTCGTCGCCGTCAGTTGGAGGCCGATTATGCGGTAGCTACGGCACGTGGTAAT
CTGCGTAGCATTAATTTGTTTGCTAGTGTAGGATATACGGGAGAGAGTCGTGAACTTTCCAGTGTCTACAGGAACTTGCA
GGATAATCAGATTGTGCAGGTAGGCGTTCAGATTCCGATTCTGGACTGGGGAAAGAGACGCGGAAAGGTACGGGTAGCGA
AAAGCAACCGCGATGTAGTGCTTTCGAAGATCCGGCAGGAACAGATCAACTTCAATCAGGACATATTCTTGCTGGTAGAG
CATTTCAATAATCAGGCACAGCAATTGGAGATAGCCAAAGAGGCGGATGGCATAGCTCAGCAACGTTACAAAACCAGTAT
TGAAACCTTCCTGATAGGTAAAATCAACACGCTGGATTTAAATGACGCCCAGAACGCCAAAGACGAGGCGCGCCGGAAGC
ACATCTCCGAACTTTATTATTACTGGTATTACTTTTATCAGATCCGTAGTCTGACTCTCTGGGATTTCCAGGCTAACACG
GAGTTGGAAGCAGATTTTGATGAAATAGTGCGGCAATAG

Upstream 100 bases:

>100_bases
GAAAATGAACACTGATACATTTCTCTAACCGATTGATAGTAAATGTATTATTCTTTTGGCACATGGTTTGATTCTATCTG
ACTGGAAAATACCGTGTACA

Downstream 100 bases:

>100_bases
GGATTAATCGGGCTATTTGTTGCTTGTATTGAGTATTTACAATATCTTTGTCACAAGTAATTTAAACTATGATTTTAATA
ATAGACGACGACAGTGCGGT

Product: putative outer membrane protein OprM

Products: NA

Alternate protein names: Outer Membrane Efflux Protein; Outer Membrane Protein; Outer Membrane Protein OprM; ABC Transport System Exported Protein; Outer Membrane Lipoprotein SilC; Exported Outer Membrane Protein; ABC Transporter Exported Protein; Outer Membrane Protein-Like Protein

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MKKKSILFVLAAICLPLAVSAQKEREITLNEAIAMARMQSVDAAVALNELKTSYWEYRTFRADLLPEINLKGTLPNYNKS
YGSYQNPDGSYSFVRNSALGLSGELSIDQNIWLTGGQLSLTSSLDYLKQLGNSGDRHLMSVPVTLKLTQPILGVNNVKWN
RRIEPVRYAEAKAEFITATEEVTMRAITYYFDLLLAKETLGTARQNLTNANQLYEVAIAKRKMGQISENELLQLKLSALN
AKAALTEAESDLNAKMFQLRAFLGVGEDEILRPVVPESVDCGKMEYNMVLNKALERNSFAQNIRRRQLEADYAVATARGN
LRSINLFASVGYTGESRELSSVYRNLQDNQIVQVGVQIPILDWGKRRGKVRVAKSNRDVVLSKIRQEQINFNQDIFLLVE
HFNNQAQQLEIAKEADGIAQQRYKTSIETFLIGKINTLDLNDAQNAKDEARRKHISELYYYWYYFYQIRSLTLWDFQANT
ELEADFDEIVRQ

Sequences:

>Translated_492_residues
MKKKSILFVLAAICLPLAVSAQKEREITLNEAIAMARMQSVDAAVALNELKTSYWEYRTFRADLLPEINLKGTLPNYNKS
YGSYQNPDGSYSFVRNSALGLSGELSIDQNIWLTGGQLSLTSSLDYLKQLGNSGDRHLMSVPVTLKLTQPILGVNNVKWN
RRIEPVRYAEAKAEFITATEEVTMRAITYYFDLLLAKETLGTARQNLTNANQLYEVAIAKRKMGQISENELLQLKLSALN
AKAALTEAESDLNAKMFQLRAFLGVGEDEILRPVVPESVDCGKMEYNMVLNKALERNSFAQNIRRRQLEADYAVATARGN
LRSINLFASVGYTGESRELSSVYRNLQDNQIVQVGVQIPILDWGKRRGKVRVAKSNRDVVLSKIRQEQINFNQDIFLLVE
HFNNQAQQLEIAKEADGIAQQRYKTSIETFLIGKINTLDLNDAQNAKDEARRKHISELYYYWYYFYQIRSLTLWDFQANT
ELEADFDEIVRQ
>Mature_492_residues
MKKKSILFVLAAICLPLAVSAQKEREITLNEAIAMARMQSVDAAVALNELKTSYWEYRTFRADLLPEINLKGTLPNYNKS
YGSYQNPDGSYSFVRNSALGLSGELSIDQNIWLTGGQLSLTSSLDYLKQLGNSGDRHLMSVPVTLKLTQPILGVNNVKWN
RRIEPVRYAEAKAEFITATEEVTMRAITYYFDLLLAKETLGTARQNLTNANQLYEVAIAKRKMGQISENELLQLKLSALN
AKAALTEAESDLNAKMFQLRAFLGVGEDEILRPVVPESVDCGKMEYNMVLNKALERNSFAQNIRRRQLEADYAVATARGN
LRSINLFASVGYTGESRELSSVYRNLQDNQIVQVGVQIPILDWGKRRGKVRVAKSNRDVVLSKIRQEQINFNQDIFLLVE
HFNNQAQQLEIAKEADGIAQQRYKTSIETFLIGKINTLDLNDAQNAKDEARRKHISELYYYWYYFYQIRSLTLWDFQANT
ELEADFDEIVRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56008; Mature: 56008

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSILFVLAAICLPLAVSAQKEREITLNEAIAMARMQSVDAAVALNELKTSYWEYRTF
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADLLPEINLKGTLPNYNKSYGSYQNPDGSYSFVRNSALGLSGELSIDQNIWLTGGQLSL
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCEEEEECCCEEE
TSSLDYLKQLGNSGDRHLMSVPVTLKLTQPILGVNNVKWNRRIEPVRYAEAKAEFITATE
HHHHHHHHHHCCCCCCEEEEECEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EVTMRAITYYFDLLLAKETLGTARQNLTNANQLYEVAIAKRKMGQISENELLQLKLSALN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEEEHHHHC
AKAALTEAESDLNAKMFQLRAFLGVGEDEILRPVVPESVDCGKMEYNMVLNKALERNSFA
HHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QNIRRRQLEADYAVATARGNLRSINLFASVGYTGESRELSSVYRNLQDNQIVQVGVQIPI
HHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEEE
LDWGKRRGKVRVAKSNRDVVLSKIRQEQINFNQDIFLLVEHFNNQAQQLEIAKEADGIAQ
ECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHH
QRYKTSIETFLIGKINTLDLNDAQNAKDEARRKHISELYYYWYYFYQIRSLTLWDFQANT
HHHHHHHHEEEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCC
ELEADFDEIVRQ
CCCCCHHHHHCC
>Mature Secondary Structure
MKKKSILFVLAAICLPLAVSAQKEREITLNEAIAMARMQSVDAAVALNELKTSYWEYRTF
CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADLLPEINLKGTLPNYNKSYGSYQNPDGSYSFVRNSALGLSGELSIDQNIWLTGGQLSL
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEECCEEEEECCCEEE
TSSLDYLKQLGNSGDRHLMSVPVTLKLTQPILGVNNVKWNRRIEPVRYAEAKAEFITATE
HHHHHHHHHHCCCCCCEEEEECEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EVTMRAITYYFDLLLAKETLGTARQNLTNANQLYEVAIAKRKMGQISENELLQLKLSALN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEEEHHHHC
AKAALTEAESDLNAKMFQLRAFLGVGEDEILRPVVPESVDCGKMEYNMVLNKALERNSFA
HHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QNIRRRQLEADYAVATARGNLRSINLFASVGYTGESRELSSVYRNLQDNQIVQVGVQIPI
HHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEEE
LDWGKRRGKVRVAKSNRDVVLSKIRQEQINFNQDIFLLVEHFNNQAQQLEIAKEADGIAQ
ECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHH
QRYKTSIETFLIGKINTLDLNDAQNAKDEARRKHISELYYYWYYFYQIRSLTLWDFQANT
HHHHHHHHEEEEECEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCC
ELEADFDEIVRQ
CCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA