Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346937

Identifier: 29346937

GI number: 29346937

Start: 1881405

End: 1883957

Strand: Reverse

Name: 29346937

Synonym: BT_1527

Alternate gene names: NA

Gene position: 1883957-1881405 (Counterclockwise)

Preceding gene: 29346938

Following gene: 29346936

Centisome position: 30.09

GC content: 46.77

Gene sequence:

>2553_bases
ATGAGATTAATAATTAAAGGTGCAGTAGCGCTCTTTCTTTTATTGGCTATCAGTATTCCGCTAAGTGCCCAATACATAGT
GCAGGGTGTGGTGACTGATTCTCTGACCAGAGAACCCTTATCTTATGTATCTGTACGTCTGAAAAACACGACCGAAGGAA
CGACTACCGGAAGTGACGGACGCTTTTATTTCAAAACCCATCGCTCCGAAGGAGTGCTTGTGATCTCAACCGTAGGCTAT
AATGAATATAGCCGGCTGATCCATCCGGCACGTAATCTTTCGTATAAAGTAGCACTTTCTCCCGCTACATATGCGCTCAA
CGAAGTATTGGTGAAGCCTAAACGCGAGCATTACCGTAAGAAAGACAATCCCGCTGTGGAGTTTGTCCGTCGGATGATAG
AACATCGTGACGACCATTCTCCTAATGAGAAAGACTTCTGGCAGCGCGACCGTTATGAGAAGACTACCTTTGCGCTGAAC
AACTTCGACGAAGAGAAACAGAAGAAATGGCTATACCGCAAATTTGATTTCCTGACAGAATATGTAGACACCTCTGCCGT
CACCGGAAAACCGATACTGACCGTATCTGCCCGTGAACTTCTTGCTACGGACTACTACCGCAAATCTCCTCATTCCGAAA
AGCAGTGGGTGAAAGGACGCAAGCAGGCAGGAGTCGATGAATTCCTTTCCAAACAAGGTATGCAGGCTGCTATTAATGAA
GTCTTTAAAGACGTGGACATTTACGAGAACAACATCTCCCTGTTCACCAATAAGTTCGTCAGCCCCTTATCCCGCATCGG
GACAGGATTCTACAAATATTATCTGATGGATACCTTGCAGATCGGCGGTGAAACCTGTGCAGACCTTGCTTTCACCCCCT
TTAATTCCGAATCTTTCGGTTTTAACGGGCACTTGTATGTCACGCTCGACTCTACCTACTTTGTCAAACGTGCCGTACTT
AACTTCCCGAAGAAGATCAATCTGAACTTTGTCGATTATATGCTGCTTGAACAGGAATTTAAGCGGGCAGAAGACGGTAC
TCGTCTGCTCGACCATGAAAGTATCACCGTAGAATTCAAACTGACCGAAGGACAGGATGGTATCTTTGCCCGTCGAGTGG
CGGATTACAGTCATTATTCTTTCCTTCCGACCGAGGAAGCCGATAAAGCCTTCACCAAACCGGAACGTATCATCGAAGAA
ACCGAAGCGCTGTCCCGACCCGAAACCTTCTGGGCGGAGAACCGTCCGCAAGCAGCCATCTCGCAACAGGAGAACTCCGT
AGACCGCCTGATGGCGCAACTGCGTGGCTATCCGGTCTATTATTGGACGGAAAAGGTGCTATCCATTCTCTTCACCGGAT
ACATCCCGACCTCTAAAGAAGCCCCTCTTTTCTATATCGGTCCCATGAATGCCACCATCAGCGGGAATACGCTGGAAGGA
CCGCGTATCCGTGCTGGTGGAATGACGACCGCATGGCTCAACCCTCATCTGTTCGGCAAAGGCTATATCGCTTATGGCTT
CAAAGACGAAAGGCTGAAAGGACTGGCGGAAGTAGAATACTCCTTTAAAAAGAAAAAGGAATATGCCAATGAATTTCCCA
TCCATTCACTGAAAGTACGTTATGAATCGGACGTTAACCAATACGGACAAAACTATCTGTACACAAGCAAAGACAATGTC
TTCCTTGCCTTGAAGCGTGAGAAAGATGATCGTATCGGCTATTACCGGCAAGCGGAAATGAGCTATACCAATGAGTTTTA
TTCCGGTTTCTCCTTCCAGCTAACGGCACGCAGGCGGACGGATGAATCGAGCTACCTGATTCCTTTTCTGCGGAAAGACG
GTGAGGTTTACTCTCCGGTTAAAGACTTCTCTACCAGTGCGGCGGAGTTGAAGCTGCGCTATGCCCCGAACGAGAAATTC
TTTCAGACACAATGGAACCGCTTCCCTGTATCGCTGGATGCTCCGGTGTTTACACTGTCGCACACCATTGCCGGAAAAGG
AGTACTGGGAAGTGATTACACCTATAATCATACCGAAGCGGGTATACAGAAACGTTTCTGGTTTTCCGCTTTCGGCTATA
CGGATATTATTCTGAAAGCAGGGAAGGTATGGGATAAAGTTCCCTTTCCGTTGCTCATTATGCCGAATGCGAACCTTTCC
TACACCATTCAGCCGGAATCCTATTCGTTAATGAATGCTATGGAGTTTATGAATGATGAATACTTTTCGTGGGACGTCAC
CTATTTCCTCAACGGGTGGTTGTTCAATCGTATCCCATTGTTGAAAAAACTGAAATGGAGGGAAATAGTTTCCTGTCGTG
GACTTTATGGGCATTTGAGTGATAAGAATAATCCGGATATGACAGACGGTTTGTTCGCTTTTCCGATAGCAAGTACCCGT
ACAATGGGAAAAACACCTTACGTGGAGGCGGGTGTGGGTATTGAAAACATTTTCAAGGTATTACGTTTAGACTACGTCTG
GCGGCTCACATATAGGGATTCGCCCGATATTGACAAGTCCGGCCTGAGGATAAGTCTTCACATGACCTTCTAA

Upstream 100 bases:

>100_bases
TCAAACGAGAACAGTTCTTCCGCTATATAGACCTTTTTTTGTTCTGAAATCCCTCCTACCTTTGCCCCGCTCAATTCAAT
AGGATGTTAAGGTATAAGAT

Downstream 100 bases:

>100_bases
AAGTTAAATCCTGCTAATTGCAATGTTTATATAGCAAACAAAGGTCGCTTTAGTAATTAATTAATCTTATTTTTGCATCA
ATTTTAGTTTAATTTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 850; Mature: 850

Protein sequence:

>850_residues
MRLIIKGAVALFLLLAISIPLSAQYIVQGVVTDSLTREPLSYVSVRLKNTTEGTTTGSDGRFYFKTHRSEGVLVISTVGY
NEYSRLIHPARNLSYKVALSPATYALNEVLVKPKREHYRKKDNPAVEFVRRMIEHRDDHSPNEKDFWQRDRYEKTTFALN
NFDEEKQKKWLYRKFDFLTEYVDTSAVTGKPILTVSARELLATDYYRKSPHSEKQWVKGRKQAGVDEFLSKQGMQAAINE
VFKDVDIYENNISLFTNKFVSPLSRIGTGFYKYYLMDTLQIGGETCADLAFTPFNSESFGFNGHLYVTLDSTYFVKRAVL
NFPKKINLNFVDYMLLEQEFKRAEDGTRLLDHESITVEFKLTEGQDGIFARRVADYSHYSFLPTEEADKAFTKPERIIEE
TEALSRPETFWAENRPQAAISQQENSVDRLMAQLRGYPVYYWTEKVLSILFTGYIPTSKEAPLFYIGPMNATISGNTLEG
PRIRAGGMTTAWLNPHLFGKGYIAYGFKDERLKGLAEVEYSFKKKKEYANEFPIHSLKVRYESDVNQYGQNYLYTSKDNV
FLALKREKDDRIGYYRQAEMSYTNEFYSGFSFQLTARRRTDESSYLIPFLRKDGEVYSPVKDFSTSAAELKLRYAPNEKF
FQTQWNRFPVSLDAPVFTLSHTIAGKGVLGSDYTYNHTEAGIQKRFWFSAFGYTDIILKAGKVWDKVPFPLLIMPNANLS
YTIQPESYSLMNAMEFMNDEYFSWDVTYFLNGWLFNRIPLLKKLKWREIVSCRGLYGHLSDKNNPDMTDGLFAFPIASTR
TMGKTPYVEAGVGIENIFKVLRLDYVWRLTYRDSPDIDKSGLRISLHMTF

Sequences:

>Translated_850_residues
MRLIIKGAVALFLLLAISIPLSAQYIVQGVVTDSLTREPLSYVSVRLKNTTEGTTTGSDGRFYFKTHRSEGVLVISTVGY
NEYSRLIHPARNLSYKVALSPATYALNEVLVKPKREHYRKKDNPAVEFVRRMIEHRDDHSPNEKDFWQRDRYEKTTFALN
NFDEEKQKKWLYRKFDFLTEYVDTSAVTGKPILTVSARELLATDYYRKSPHSEKQWVKGRKQAGVDEFLSKQGMQAAINE
VFKDVDIYENNISLFTNKFVSPLSRIGTGFYKYYLMDTLQIGGETCADLAFTPFNSESFGFNGHLYVTLDSTYFVKRAVL
NFPKKINLNFVDYMLLEQEFKRAEDGTRLLDHESITVEFKLTEGQDGIFARRVADYSHYSFLPTEEADKAFTKPERIIEE
TEALSRPETFWAENRPQAAISQQENSVDRLMAQLRGYPVYYWTEKVLSILFTGYIPTSKEAPLFYIGPMNATISGNTLEG
PRIRAGGMTTAWLNPHLFGKGYIAYGFKDERLKGLAEVEYSFKKKKEYANEFPIHSLKVRYESDVNQYGQNYLYTSKDNV
FLALKREKDDRIGYYRQAEMSYTNEFYSGFSFQLTARRRTDESSYLIPFLRKDGEVYSPVKDFSTSAAELKLRYAPNEKF
FQTQWNRFPVSLDAPVFTLSHTIAGKGVLGSDYTYNHTEAGIQKRFWFSAFGYTDIILKAGKVWDKVPFPLLIMPNANLS
YTIQPESYSLMNAMEFMNDEYFSWDVTYFLNGWLFNRIPLLKKLKWREIVSCRGLYGHLSDKNNPDMTDGLFAFPIASTR
TMGKTPYVEAGVGIENIFKVLRLDYVWRLTYRDSPDIDKSGLRISLHMTF
>Mature_850_residues
MRLIIKGAVALFLLLAISIPLSAQYIVQGVVTDSLTREPLSYVSVRLKNTTEGTTTGSDGRFYFKTHRSEGVLVISTVGY
NEYSRLIHPARNLSYKVALSPATYALNEVLVKPKREHYRKKDNPAVEFVRRMIEHRDDHSPNEKDFWQRDRYEKTTFALN
NFDEEKQKKWLYRKFDFLTEYVDTSAVTGKPILTVSARELLATDYYRKSPHSEKQWVKGRKQAGVDEFLSKQGMQAAINE
VFKDVDIYENNISLFTNKFVSPLSRIGTGFYKYYLMDTLQIGGETCADLAFTPFNSESFGFNGHLYVTLDSTYFVKRAVL
NFPKKINLNFVDYMLLEQEFKRAEDGTRLLDHESITVEFKLTEGQDGIFARRVADYSHYSFLPTEEADKAFTKPERIIEE
TEALSRPETFWAENRPQAAISQQENSVDRLMAQLRGYPVYYWTEKVLSILFTGYIPTSKEAPLFYIGPMNATISGNTLEG
PRIRAGGMTTAWLNPHLFGKGYIAYGFKDERLKGLAEVEYSFKKKKEYANEFPIHSLKVRYESDVNQYGQNYLYTSKDNV
FLALKREKDDRIGYYRQAEMSYTNEFYSGFSFQLTARRRTDESSYLIPFLRKDGEVYSPVKDFSTSAAELKLRYAPNEKF
FQTQWNRFPVSLDAPVFTLSHTIAGKGVLGSDYTYNHTEAGIQKRFWFSAFGYTDIILKAGKVWDKVPFPLLIMPNANLS
YTIQPESYSLMNAMEFMNDEYFSWDVTYFLNGWLFNRIPLLKKLKWREIVSCRGLYGHLSDKNNPDMTDGLFAFPIASTR
TMGKTPYVEAGVGIENIFKVLRLDYVWRLTYRDSPDIDKSGLRISLHMTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98374; Mature: 98374

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIIKGAVALFLLLAISIPLSAQYIVQGVVTDSLTREPLSYVSVRLKNTTEGTTTGSDG
CEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCCC
RFYFKTHRSEGVLVISTVGYNEYSRLIHPARNLSYKVALSPATYALNEVLVKPKREHYRK
EEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCHHHCCC
KDNPAVEFVRRMIEHRDDHSPNEKDFWQRDRYEKTTFALNNFDEEKQKKWLYRKFDFLTE
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHH
YVDTSAVTGKPILTVSARELLATDYYRKSPHSEKQWVKGRKQAGVDEFLSKQGMQAAINE
HHCCCCCCCCCEEEECHHHHHHHHHHHCCCCCHHHHHCCHHHCCHHHHHHHCCHHHHHHH
VFKDVDIYENNISLFTNKFVSPLSRIGTGFYKYYLMDTLQIGGETCADLAFTPFNSESFG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEECCCCCCCCC
FNGHLYVTLDSTYFVKRAVLNFPKKINLNFVDYMLLEQEFKRAEDGTRLLDHESITVEFK
CCCEEEEEECCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEEE
LTEGQDGIFARRVADYSHYSFLPTEEADKAFTKPERIIEETEALSRPETFWAENRPQAAI
EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCCHHH
SQQENSVDRLMAQLRGYPVYYWTEKVLSILFTGYIPTSKEAPLFYIGPMNATISGNTLEG
HHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEECCCCCCC
PRIRAGGMTTAWLNPHLFGKGYIAYGFKDERLKGLAEVEYSFKKKKEYANEFPIHSLKVR
CEEECCCEEEEECCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
YESDVNQYGQNYLYTSKDNVFLALKREKDDRIGYYRQAEMSYTNEFYSGFSFQLTARRRT
EHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCC
DESSYLIPFLRKDGEVYSPVKDFSTSAAELKLRYAPNEKFFQTQWNRFPVSLDAPVFTLS
CCCCEEEEEEECCCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHCCCCCEEECCCEEEEE
HTIAGKGVLGSDYTYNHTEAGIQKRFWFSAFGYTDIILKAGKVWDKVPFPLLIMPNANLS
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHCCCCCEEEECCCCEE
YTIQPESYSLMNAMEFMNDEYFSWDVTYFLNGWLFNRIPLLKKLKWREIVSCRGLYGHLS
EEECCCCHHHHHHHHHHCCCCEEEEEHEEECCHHHHCCHHHHHHHHHHHHHHCCCEEECC
DKNNPDMTDGLFAFPIASTRTMGKTPYVEAGVGIENIFKVLRLDYVWRLTYRDSPDIDKS
CCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHEEEEEECCCCCCCCC
GLRISLHMTF
CCEEEEEEEC
>Mature Secondary Structure
MRLIIKGAVALFLLLAISIPLSAQYIVQGVVTDSLTREPLSYVSVRLKNTTEGTTTGSDG
CEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCCC
RFYFKTHRSEGVLVISTVGYNEYSRLIHPARNLSYKVALSPATYALNEVLVKPKREHYRK
EEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCCCHHHCCC
KDNPAVEFVRRMIEHRDDHSPNEKDFWQRDRYEKTTFALNNFDEEKQKKWLYRKFDFLTE
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHH
YVDTSAVTGKPILTVSARELLATDYYRKSPHSEKQWVKGRKQAGVDEFLSKQGMQAAINE
HHCCCCCCCCCEEEECHHHHHHHHHHHCCCCCHHHHHCCHHHCCHHHHHHHCCHHHHHHH
VFKDVDIYENNISLFTNKFVSPLSRIGTGFYKYYLMDTLQIGGETCADLAFTPFNSESFG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEECCCCCCCCC
FNGHLYVTLDSTYFVKRAVLNFPKKINLNFVDYMLLEQEFKRAEDGTRLLDHESITVEFK
CCCEEEEEECCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEEE
LTEGQDGIFARRVADYSHYSFLPTEEADKAFTKPERIIEETEALSRPETFWAENRPQAAI
EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCHHCCCCCCCHHH
SQQENSVDRLMAQLRGYPVYYWTEKVLSILFTGYIPTSKEAPLFYIGPMNATISGNTLEG
HHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEECCCCCCC
PRIRAGGMTTAWLNPHLFGKGYIAYGFKDERLKGLAEVEYSFKKKKEYANEFPIHSLKVR
CEEECCCEEEEECCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
YESDVNQYGQNYLYTSKDNVFLALKREKDDRIGYYRQAEMSYTNEFYSGFSFQLTARRRT
EHHHHHHHCCCCEEECCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCC
DESSYLIPFLRKDGEVYSPVKDFSTSAAELKLRYAPNEKFFQTQWNRFPVSLDAPVFTLS
CCCCEEEEEEECCCCCCCCHHHHCCCCEEEEEEECCCCCHHHHHCCCCCEEECCCEEEEE
HTIAGKGVLGSDYTYNHTEAGIQKRFWFSAFGYTDIILKAGKVWDKVPFPLLIMPNANLS
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHCCCCCEEEECCCCEE
YTIQPESYSLMNAMEFMNDEYFSWDVTYFLNGWLFNRIPLLKKLKWREIVSCRGLYGHLS
EEECCCCHHHHHHHHHHCCCCEEEEEHEEECCHHHHCCHHHHHHHHHHHHHHCCCEEECC
DKNNPDMTDGLFAFPIASTRTMGKTPYVEAGVGIENIFKVLRLDYVWRLTYRDSPDIDKS
CCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHEEEEEECCCCCCCCC
GLRISLHMTF
CCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA