| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346894
Identifier: 29346894
GI number: 29346894
Start: 1828912
End: 1830483
Strand: Reverse
Name: 29346894
Synonym: BT_1484
Alternate gene names: NA
Gene position: 1830483-1828912 (Counterclockwise)
Preceding gene: 29346905
Following gene: 29346891
Centisome position: 29.24
GC content: 46.63
Gene sequence:
>1572_bases ATGAACGCACCTGTTAAAACGCTCCGTAAGCTCCCGATAGGGATACAAAGTTTCGAATTTCTTCGCTCGGAAGGATATCT TTATGTCGATAAAACAGAACTGGTCTATCGTCTCGTAACGAAAGGGAAGCCTTATTTCCTCAGTCGTCCCCGGCGTTTCG GGAAGAGCCTGTTGCTTTCCACGCTTGAAGCTTATTTCAAGGGGAAGAAAGAACTTTTCGAAGGACTCGCTATCGAGAAA TTGGAGCAGAACTGGTTCGAATACCCGGTGTTGCACCTAAGCTTGAATGCTGAGAAATATGACAGTAGGGAACGATTGGA AAGAATGCTTGAACTGCAACTGGAAAGTTGGGAAGAGATGTATGGAGTAGATAAAGGCACAATGACCTACTCCGGACGCT TCATTACCATTATCCGACGTGCATACGAACAGACCGGACGCCGTGTGGTCGTACTCGTAGACGAATATGACAAACCCATG CTTCAGACATTCGATAAACCTGATTTGCAAGAAGACTTCCGTAAAACGCTGACCGCTTTCTATACTGTACTCAAAGATGC TGACCCTTATCTTCAGTTTGTCTTTATCACCGGAGTAACGAAGTTTGCGCAGATGGGCATTTTCAGCACGCTTAACCAGT TGAATGATATCAGCTTTGACCTTGAGTACAACACCCTTTGCGGCATGACACGTGCGGAAATCGAAACCGTTTTTGTGCCT GAATTGCAAGAACTGGCTCTCCAGACTGAAACCAATTATGGCGAAGCCGTAGAGCAACTCACCCGCCAGTATGACGGTTA CCGCTTCACTCCTGAGAAAGGATTTACTCCCATGTTCAATCCTTTCAGTGTGCTCAATGCCCTTGCCAAGTCGCGTTTCG GTGACTATTGGTTTGCCAGCGGAACGCCTACTTTTTTGGTAGAGATCCTAAAGAAGACAAATTTCGACCTTCGCGAATTG GACGGTATTGAAGTCTCTTCCGCCTCCTTGAGTGACGACAGGGCGAATATCTCCAATCCCGTTCCGATGATTTATCAAAG CGGATACCTGACTATAAAGTCGTTCGACCAACGCTTTCGTACATATACACTAGGGTTTCCTAACGAAGAGGTGAAATATG GTTTCCTCAATTTTGTCGCCCCTTTCTATACTCCTGTCGCATCCACCGATACCACCTTTTATATCGGGAAATTTGTGCAT GAACTGGAAACGGGCGAAACGGAAGCTTTCCTCACTCGTCTGTCCTGTTTCTTCGCCGATTTTCCTTACGAACTGAACGA GAAAACGGAACGTCATTATCAAGTTGTATTCTATCTCGTCTTCAAACTCATGGGGCAATTCACGCAAGCGGAAGTCCGTA CCGCTATCGGTCGTGCCGACGCAGTAGTAAAGACTGCGGACTACATCTATGTGTTCGAATTTAAACTCACCGGCACCGCC GAAGAAGCTCTGAAGCAGATTGATGAAAAAGGTTACCTTTTGCCCTACACTGTGGATGGCAGACGACTGGTGAAAGTCGG TGTGTCCTTTGATGCCGGGAAACGGAATCTGGGAGATTGGCTGATTGTTTGA
Upstream 100 bases:
>100_bases TGTGTGAATAGGGCTAAATAATCTCTTCCCTTCGGGTGGAATCTGCATCGAATTTGTTATCTTTGCCCGTAGCATTGGTT ATTTTTTAATAAAAGCTGAT
Downstream 100 bases:
>100_bases CTGCACTGTGAATAAAGAAAAACCAAGCTGTTTATTTCTCTTTCGCCAGCGTGAAGACAAATTCCAGTCCGCCGCCTTGA TTATTCTTGGCAGAAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLSTLEAYFKGKKELFEGLAIEK LEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEMYGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPM LQTFDKPDLQEDFRKTLTAFYTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFASGTPTFLVEILKKTNFDLREL DGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFRTYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVH ELETGETEAFLTRLSCFFADFPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV
Sequences:
>Translated_523_residues MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLSTLEAYFKGKKELFEGLAIEK LEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEMYGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPM LQTFDKPDLQEDFRKTLTAFYTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFASGTPTFLVEILKKTNFDLREL DGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFRTYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVH ELETGETEAFLTRLSCFFADFPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV >Mature_523_residues MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLSTLEAYFKGKKELFEGLAIEK LEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEMYGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPM LQTFDKPDLQEDFRKTLTAFYTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFASGTPTFLVEILKKTNFDLREL DGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFRTYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVH ELETGETEAFLTRLSCFFADFPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018631 - InterPro: IPR012547 [H]
Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]
EC number: NA
Molecular weight: Translated: 60636; Mature: 60636
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLS CCCCHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH TLEAYFKGKKELFEGLAIEKLEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEM HHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHCCCHHHHHHHHHHHHHHHHHH YGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPMLQTFDKPDLQEDFRKTLTAF HCCCCCCEEECCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH YTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP HHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHEEECC ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFAS CHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEECC GTPTFLVEILKKTNFDLRELDGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFR CCHHHHHHHHHHCCCCHHHCCCCEECCCCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHH TYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVHELETGETEAFLTRLSCFFAD EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC FPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEEECCCH EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV HHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEC >Mature Secondary Structure MNAPVKTLRKLPIGIQSFEFLRSEGYLYVDKTELVYRLVTKGKPYFLSRPRRFGKSLLLS CCCCHHHHHHCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH TLEAYFKGKKELFEGLAIEKLEQNWFEYPVLHLSLNAEKYDSRERLERMLELQLESWEEM HHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHCCCHHHHHHHHHHHHHHHHHH YGVDKGTMTYSGRFITIIRRAYEQTGRRVVVLVDEYDKPMLQTFDKPDLQEDFRKTLTAF HCCCCCCEEECCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHH YTVLKDADPYLQFVFITGVTKFAQMGIFSTLNQLNDISFDLEYNTLCGMTRAEIETVFVP HHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHEEECC ELQELALQTETNYGEAVEQLTRQYDGYRFTPEKGFTPMFNPFSVLNALAKSRFGDYWFAS CHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEECC GTPTFLVEILKKTNFDLRELDGIEVSSASLSDDRANISNPVPMIYQSGYLTIKSFDQRFR CCHHHHHHHHHHCCCCHHHCCCCEECCCCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHH TYTLGFPNEEVKYGFLNFVAPFYTPVASTDTTFYIGKFVHELETGETEAFLTRLSCFFAD EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC FPYELNEKTERHYQVVFYLVFKLMGQFTQAEVRTAIGRADAVVKTADYIYVFEFKLTGTA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEEECCCH EEALKQIDEKGYLLPYTVDGRRLVKVGVSFDAGKRNLGDWLIV HHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2388847 [H]