Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346891

Identifier: 29346891

GI number: 29346891

Start: 1824973

End: 1826166

Strand: Reverse

Name: 29346891

Synonym: BT_1481

Alternate gene names: NA

Gene position: 1826166-1824973 (Counterclockwise)

Preceding gene: 29346894

Following gene: 29346890

Centisome position: 29.17

GC content: 48.91

Gene sequence:

>1194_bases
ATGATAAAAATAGACTTGAAACGATATAGACGCGAAGTGGTAGGAGGGGTGATTGTACTGCTTCTTCTCATCGGGGGAAT
CTCCGTCTTTAAATATACTTCTTTTAATTCCGGCTTTGAGATCGTAGACGATCTGGGAGGAAATATCTTTCCGTCGGCCA
TCCTGTCGGTAGCCACTACGGACGCGCAGGTGATTACTCCTTCGGATTCTACCTGTCTCGGAAATCCGAAATCGTGCATC
GCCATTCGGGTGAAGTCGAGGACTGCTTACAGCCGAGTGCGGATAGAGGTTGCCGAGACCCCTTTCTTTTCCCGTTCCGT
GTCGGAATTTGTGCTGAACAAGCCGAGGACGGAATATACTATTTATCCCGATATCATCTGGAATTACGAGGCACTGAAGA
ATAACGCACAGGCGGAACCGGTGAGCGTAGCCGTAAAAGTGGAGATGAACGGGAAAGACTTGGGACAACGGGTACGTACG
TTTTCGGTGCGTAGCGTCAATGAATGCCTGTTGGGTTATGTGGCGAACGGGACGAAGTTTTACGATACCAGTATCTTTTT
TGCCGCATACGTCAACGAAGAGAATCCGATGATCGACCAGCTGCTTCGTGAAGCGCTGAATACCCGCATCGTGAATCGTT
TCCTGGGCTACCAGAGCACGGCCAAAGGTGCGGTAGACAAGCAGGTGTACGCACTTTGGAACATCTTACAGAAACGTAAG
TTCCGCTACAGTTCCGTATCCAATACGAGCCTTTCGAGCAATGTCGTTTTCTCGCAACGCGTCCGCACCTTTGACGATGC
GCTGGAATCGTCGCAGATCAACTGTGTGGACGGCAGCGTACTGTTCGCTTCGCTCCTTCGGGCTATTAATATCGAACCGA
TACTGGTACGTACACCGGGGCATATGTTCGTAGGATACTACACCGACAACTCTCATAAGGACATGAACTTCCTCGAAACG
ACGATGATCGGTGATGTAGACCTCGACGACTTCTTCCCGGATGAACAACTGGACTCTACCATGGTCGGCAAATCGCAGAA
CGAAATGTCACTGCTCACTTTCGAGAAATCCAAACAGTACGCCAACAAAAAGTACAAAGACAATGAAGCAGGCATCCATT
CCGGAAAGCTGAACTATATGTTTCTGGAGATTTCCAAAGAAGTACGGAGGAAAATACAGCCGATAGGAAAGTGA

Upstream 100 bases:

>100_bases
GATGATATTTGAAAGTTTTTATGGGATATGCGAGGAAAAACCGTCTGTTATTTGTTATCTTTGTGTAGCGATAGGATAAT
AAATACACAGTTTGCAGATC

Downstream 100 bases:

>100_bases
AATTCATTTTTAATTCGTATTTTTGCCCAAGTAATCATTTAATGAAAAAGGATGCAAGGCAAGAAATTTATCTCCCCCGG
AGCATGGTTTTCGATGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MIKIDLKRYRREVVGGVIVLLLLIGGISVFKYTSFNSGFEIVDDLGGNIFPSAILSVATTDAQVITPSDSTCLGNPKSCI
AIRVKSRTAYSRVRIEVAETPFFSRSVSEFVLNKPRTEYTIYPDIIWNYEALKNNAQAEPVSVAVKVEMNGKDLGQRVRT
FSVRSVNECLLGYVANGTKFYDTSIFFAAYVNEENPMIDQLLREALNTRIVNRFLGYQSTAKGAVDKQVYALWNILQKRK
FRYSSVSNTSLSSNVVFSQRVRTFDDALESSQINCVDGSVLFASLLRAINIEPILVRTPGHMFVGYYTDNSHKDMNFLET
TMIGDVDLDDFFPDEQLDSTMVGKSQNEMSLLTFEKSKQYANKKYKDNEAGIHSGKLNYMFLEISKEVRRKIQPIGK

Sequences:

>Translated_397_residues
MIKIDLKRYRREVVGGVIVLLLLIGGISVFKYTSFNSGFEIVDDLGGNIFPSAILSVATTDAQVITPSDSTCLGNPKSCI
AIRVKSRTAYSRVRIEVAETPFFSRSVSEFVLNKPRTEYTIYPDIIWNYEALKNNAQAEPVSVAVKVEMNGKDLGQRVRT
FSVRSVNECLLGYVANGTKFYDTSIFFAAYVNEENPMIDQLLREALNTRIVNRFLGYQSTAKGAVDKQVYALWNILQKRK
FRYSSVSNTSLSSNVVFSQRVRTFDDALESSQINCVDGSVLFASLLRAINIEPILVRTPGHMFVGYYTDNSHKDMNFLET
TMIGDVDLDDFFPDEQLDSTMVGKSQNEMSLLTFEKSKQYANKKYKDNEAGIHSGKLNYMFLEISKEVRRKIQPIGK
>Mature_397_residues
MIKIDLKRYRREVVGGVIVLLLLIGGISVFKYTSFNSGFEIVDDLGGNIFPSAILSVATTDAQVITPSDSTCLGNPKSCI
AIRVKSRTAYSRVRIEVAETPFFSRSVSEFVLNKPRTEYTIYPDIIWNYEALKNNAQAEPVSVAVKVEMNGKDLGQRVRT
FSVRSVNECLLGYVANGTKFYDTSIFFAAYVNEENPMIDQLLREALNTRIVNRFLGYQSTAKGAVDKQVYALWNILQKRK
FRYSSVSNTSLSSNVVFSQRVRTFDDALESSQINCVDGSVLFASLLRAINIEPILVRTPGHMFVGYYTDNSHKDMNFLET
TMIGDVDLDDFFPDEQLDSTMVGKSQNEMSLLTFEKSKQYANKKYKDNEAGIHSGKLNYMFLEISKEVRRKIQPIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44797; Mature: 44797

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIDLKRYRREVVGGVIVLLLLIGGISVFKYTSFNSGFEIVDDLGGNIFPSAILSVATT
CEEECHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHCCCCCCHHHHHHHCCC
DAQVITPSDSTCLGNPKSCIAIRVKSRTAYSRVRIEVAETPFFSRSVSEFVLNKPRTEYT
CCEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCEE
IYPDIIWNYEALKNNAQAEPVSVAVKVEMNGKDLGQRVRTFSVRSVNECLLGYVANGTKF
ECCHHEECHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
YDTSIFFAAYVNEENPMIDQLLREALNTRIVNRFLGYQSTAKGAVDKQVYALWNILQKRK
EECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FRYSSVSNTSLSSNVVFSQRVRTFDDALESSQINCVDGSVLFASLLRAINIEPILVRTPG
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCEEEEECCC
HMFVGYYTDNSHKDMNFLETTMIGDVDLDDFFPDEQLDSTMVGKSQNEMSLLTFEKSKQY
CEEEEEEECCCCCCCHHHHHHEECCCCCHHCCCCHHHCHHHCCCCCCCEEEEEEHHHHHH
ANKKYKDNEAGIHSGKLNYMFLEISKEVRRKIQPIGK
HCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHCCCCC
>Mature Secondary Structure
MIKIDLKRYRREVVGGVIVLLLLIGGISVFKYTSFNSGFEIVDDLGGNIFPSAILSVATT
CEEECHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCHHHHHCCCCCCHHHHHHHCCC
DAQVITPSDSTCLGNPKSCIAIRVKSRTAYSRVRIEVAETPFFSRSVSEFVLNKPRTEYT
CCEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCEE
IYPDIIWNYEALKNNAQAEPVSVAVKVEMNGKDLGQRVRTFSVRSVNECLLGYVANGTKF
ECCHHEECHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
YDTSIFFAAYVNEENPMIDQLLREALNTRIVNRFLGYQSTAKGAVDKQVYALWNILQKRK
EECEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FRYSSVSNTSLSSNVVFSQRVRTFDDALESSQINCVDGSVLFASLLRAINIEPILVRTPG
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCEEEEECCC
HMFVGYYTDNSHKDMNFLETTMIGDVDLDDFFPDEQLDSTMVGKSQNEMSLLTFEKSKQY
CEEEEEEECCCCCCCHHHHHHEECCCCCHHCCCCHHHCHHHCCCCCCCEEEEEEHHHHHH
ANKKYKDNEAGIHSGKLNYMFLEISKEVRRKIQPIGK
HCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA