Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346837

Identifier: 29346837

GI number: 29346837

Start: 1758954

End: 1759793

Strand: Reverse

Name: 29346837

Synonym: BT_1427

Alternate gene names: NA

Gene position: 1759793-1758954 (Counterclockwise)

Preceding gene: 29346839

Following gene: 29346836

Centisome position: 28.11

GC content: 37.98

Gene sequence:

>840_bases
ATGGAAAATTTCGTAAGAAATAGTAAGCTGAACATAGAAAAAGAAATTAAAAGGATTGAGCAACAGCCGATTGCCCTTCT
CGAGCGGATAAAGCAGATAATAGATGTCATACAGACATCACTTACTTTGCTGAAAAGGGCAGTTGCCGAATATCAATTTC
AGAATCCTGAAGAAGAAATTCAGTTCTTTAAAGTCTGGAAACCGCAGATTTCCGGCTTGCTGATGTTTTATATCCGTTTA
TATCAGATTGAAAAGAACCGTGTCGGCAAATCCCTGTCGGCTCAATGCAAATATTTAAAGATGGAGCTGGAAAATATACA
GAAGTCATTTTTGAATAATAGCTTCTATGATTATTATCGTGCCGGTCAGACCGAACTTGATAACCAATATTTTATCCGTG
AGAATTATGATATTCTTTCCGATGTTCATTGTCATTTGCTGGACAGGGATTCTTCTTTTACCACCTTACACGATTCAAGC
GTTGCAATGATTCTGGCGAATAGTCATTTGATAGAATATGTGTCAGACGAGATCGATTCGCTGTCAGACAAACTGCATCT
TAAATTCACCTCCATAGTAGACAGTAAGTTGCTGCAATGGACGGATAGTAAAGTCGCCTTGGTTGAATTCATCTATGCGA
TCTATGCGGGCAAATGCTTTAATAATGGAAATACCAGTCTGAAAGACATCGCTTTTTGTTGCGAGATACTTTTCAATATC
GAGATTGGGGACTTTTATCGTATCTTCTTGGAAATTAGGAATCGGAAGAAGAGCAGGACACAATTTCTTGATAAGTTGAA
GGATAAAATACAGAAGATGATGGAGGAGCTCGACAGATAA

Upstream 100 bases:

>100_bases
ATTCACAGCATCGTTTTTTTAAGACGAGTGCAATTTGGTATTCAGGCTTTTAGTCAGACTCCTTTTGACGGTTCGAAAGC
TGTGGGTACATTGAGAATGA

Downstream 100 bases:

>100_bases
ATTTCACGCCATCTTGTGACATCTTGTGAATTTTATAAATGGATTATATCCAACTTTGCTTTATGGATACAACATTTACA
TGGGAGATAAAGGCAAAGAA

Product: tetracycline resistance element mobilization regulatory protein rteC

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEIQFFKVWKPQISGLLMFYIRL
YQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYRAGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSS
VAMILANSHLIEYVSDEIDSLSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI
EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR

Sequences:

>Translated_279_residues
MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEIQFFKVWKPQISGLLMFYIRL
YQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYRAGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSS
VAMILANSHLIEYVSDEIDSLSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI
EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR
>Mature_279_residues
MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEIQFFKVWKPQISGLLMFYIRL
YQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYRAGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSS
VAMILANSHLIEYVSDEIDSLSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI
EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33088; Mature: 33088

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEI
CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
QFFKVWKPQISGLLMFYIRLYQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSSVAMILANSHLIEYVSDEIDS
CCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHH
LSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENFVRNSKLNIEKEIKRIEQQPIALLERIKQIIDVIQTSLTLLKRAVAEYQFQNPEEEI
CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
QFFKVWKPQISGLLMFYIRLYQIEKNRVGKSLSAQCKYLKMELENIQKSFLNNSFYDYYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AGQTELDNQYFIRENYDILSDVHCHLLDRDSSFTTLHDSSVAMILANSHLIEYVSDEIDS
CCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHH
LSDKLHLKFTSIVDSKLLQWTDSKVALVEFIYAIYAGKCFNNGNTSLKDIAFCCEILFNI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
EIGDFYRIFLEIRNRKKSRTQFLDKLKDKIQKMMEELDR
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA