| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346839
Identifier: 29346839
GI number: 29346839
Start: 1760607
End: 1761023
Strand: Reverse
Name: 29346839
Synonym: BT_1429
Alternate gene names: NA
Gene position: 1761023-1760607 (Counterclockwise)
Preceding gene: 29346840
Following gene: 29346837
Centisome position: 28.13
GC content: 44.36
Gene sequence:
>417_bases ATGTCAACAAAAACTATGAAAGAGAAAGCGGTGGAGTTATTGCAGAAATGCGAAGTTGTCACCCTTGCTTCTGTGAACAA GGAAGGCTATCCCCGTCCTGTGCCAATGAGTAAAATTGCAGCAGAAGGAATTTCCACTATCTGGATGTCCACCGGAGCGG ATTCATTAAAGACTATTGATTTTTTATCGAATCCGAAAGCAGGATTATGTTTTCAGGAGAAGGGGGACAGTGTGGCATTG ATGGGAGAAGTGGAAGTCGTGACAGACGAGAAACTGAAGCAGGAACTTTGGCAGGACTGGTTTATCGAACACTTTCCCGG TGGTCCTACAGATCCGGGCTATGTATTGCTAAAGTTCACCGCCAATCACGCAACCTACTGGATTGAAGGTACCTTTATTC ATAAAAAGCTTGACTAA
Upstream 100 bases:
>100_bases TCGAACCTTAGCACCGGATTAGTAAAAGTCGATTTTTTACAATAGAACGGACATCTGTGCCGTTATCTTTGTGGCGAAAT AAAATAAATACAATAAGATT
Downstream 100 bases:
>100_bases TCTTGATCTGGAGCGATTATAAAATTGACAGGTAACGGTACATTTGTGTACGAAAAAAGAGAAAGACATTCCCAAAGTAA GGACTGTTTTTCTCTTTTAT
Product: putative general stress protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSTKTMKEKAVELLQKCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKGDSVAL MGEVEVVTDEKLKQELWQDWFIEHFPGGPTDPGYVLLKFTANHATYWIEGTFIHKKLD
Sequences:
>Translated_138_residues MSTKTMKEKAVELLQKCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKGDSVAL MGEVEVVTDEKLKQELWQDWFIEHFPGGPTDPGYVLLKFTANHATYWIEGTFIHKKLD >Mature_137_residues STKTMKEKAVELLQKCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKGDSVALM GEVEVVTDEKLKQELWQDWFIEHFPGGPTDPGYVLLKFTANHATYWIEGTFIHKKLD
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15410; Mature: 15279
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKTMKEKAVELLQKCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSLKTID CCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEH FLSNPKAGLCFQEKGDSVALMGEVEVVTDEKLKQELWQDWFIEHFPGGPTDPGYVLLKFT HHCCCCCCCEEECCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE ANHATYWIEGTFIHKKLD CCCEEEEEEEEEEEEECC >Mature Secondary Structure STKTMKEKAVELLQKCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSLKTID CCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCEEEH FLSNPKAGLCFQEKGDSVALMGEVEVVTDEKLKQELWQDWFIEHFPGGPTDPGYVLLKFT HHCCCCCCCEEECCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE ANHATYWIEGTFIHKKLD CCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA